RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 MPHOSPH8Q99549 860 aa13.39□□□□□ -0.27
ECM1-201ENST00000346569 BOLA2Q9H3K6 86 aa13.39□□□□□ -0.27
ECM1-201ENST00000346569 MROH5Q6ZUA9 1318 aa13.39□□□□□ -0.27
ECM1-201ENST00000346569 PNPLA7Q6ZV29 1317 aa13.39□□□□□ -0.27
ECM1-201ENST00000346569 PSDA5PKW4 1024 aaPredicted RBP13.39□□□□□ -0.27
ECM1-201ENST00000346569 POLRMTO00411 1230 aaKnown RBP13.39□□□□□ -0.27
ECM1-201ENST00000346569 ZNF609O15014 1411 aa13.39□□□□□ -0.27
ECM1-201ENST00000346569 IGHMBP2P38935 993 aaKnown RBP13.39□□□□□ -0.27
ECM1-201ENST00000346569 DDR1Q08345 913 aa13.39□□□□□ -0.27
ECM1-201ENST00000346569 SLC15A2Q16348 729 aa13.39□□□□□ -0.27
ECM1-201ENST00000346569 RIC1Q4ADV7 1423 aa13.39□□□□□ -0.27
ECM1-201ENST00000346569 CCDC24Q8N4L8 307 aa13.39□□□□□ -0.27
ECM1-201ENST00000346569 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.39□□□□□ -0.27
ECM1-201ENST00000346569 EVI5LQ96CN4 794 aa13.39□□□□□ -0.27
ECM1-201ENST00000346569 CDC5LQ99459 802 aaKnown RBP13.39□□□□□ -0.27
ECM1-201ENST00000346569 UPF2Q9HAU5 1272 aaKnown RBP13.39□□□□□ -0.27
ECM1-201ENST00000346569 BSDC1Q9NW68 430 aaPredicted RBP13.39□□□□□ -0.27
ECM1-201ENST00000346569 LAMB2P55268 1798 aa13.38□□□□□ -0.27
ECM1-201ENST00000346569 KLRG2A4D1S0 409 aaPredicted RBP13.38□□□□□ -0.27
ECM1-201ENST00000346569 CASC1Q6TDU7 716 aa13.38□□□□□ -0.27
ECM1-201ENST00000346569 CNBD1Q8NA66 436 aa13.38□□□□□ -0.27
ECM1-201ENST00000346569 XAGE2Q96GT9 111 aa13.38□□□□□ -0.27
ECM1-201ENST00000346569 HAUS7Q99871 368 aa13.38□□□□□ -0.27
ECM1-201ENST00000346569 USP26Q9BXU7 913 aa13.38□□□□□ -0.27
ECM1-201ENST00000346569 C22orf23Q9BZE7 217 aa13.38□□□□□ -0.27
ECM1-201ENST00000346569 ADORA1P30542 326 aa13.37□□□□□ -0.27
ECM1-201ENST00000346569 RBM25P49756 843 aaKnown RBP13.37□□□□□ -0.27
ECM1-201ENST00000346569 RPS8P62241 208 aaKnown RBP13.37□□□□□ -0.27
ECM1-201ENST00000346569 ATP2B3Q16720 1220 aa13.37□□□□□ -0.27
ECM1-201ENST00000346569 ANKRD18AQ8IVF6 992 aa13.37□□□□□ -0.27
ECM1-201ENST00000346569 CELF1Q92879 486 aaKnown RBP13.37□□□□□ -0.27
ECM1-201ENST00000346569 ESYT1Q9BSJ8 1104 aa13.37□□□□□ -0.27
ECM1-201ENST00000346569 ANO8Q9HCE9 1232 aaPredicted RBP13.37□□□□□ -0.27
ECM1-201ENST00000346569 R3HDM1Q15032 1099 aaKnown RBP13.36□□□□□ -0.27
ECM1-201ENST00000346569 CRY2Q49AN0 593 aa13.36□□□□□ -0.27
ECM1-201ENST00000346569 HELBQ8NG08 1087 aaPredicted RBP13.36□□□□□ -0.27
ECM1-201ENST00000346569 LPIN2Q92539 896 aa13.36□□□□□ -0.27
ECM1-201ENST00000346569 ZNF512BQ96KM6 892 aaPredicted RBP13.36□□□□□ -0.27
ECM1-201ENST00000346569 MINPP1Q9UNW1 487 aa13.36□□□□□ -0.27
ECM1-201ENST00000346569 ANP32AP39687 249 aaKnown RBP13.35□□□□□ -0.27
ECM1-201ENST00000346569 CHRNDQ07001 517 aa13.35□□□□□ -0.27
ECM1-201ENST00000346569 CCDC158Q5M9N0 1113 aa13.35□□□□□ -0.27
ECM1-201ENST00000346569 TICAM2Q86XR7 235 aa13.35□□□□□ -0.27
ECM1-201ENST00000346569 COL4A1P02462 1669 aa13.35□□□□□ -0.27
ECM1-201ENST00000346569 SNAP23O00161 211 aa13.34□□□□□ -0.27
ECM1-201ENST00000346569 TAF5LO75529 589 aa13.34□□□□□ -0.27
ECM1-201ENST00000346569 PUM3Q15397 648 aaKnown RBP13.34□□□□□ -0.27
ECM1-201ENST00000346569 DDX46Q7L014 1031 aaKnown RBP13.34□□□□□ -0.27
ECM1-201ENST00000346569 EDC3Q96F86 508 aaKnown RBP13.34□□□□□ -0.27
ECM1-201ENST00000346569 IL25Q9H293 177 aa13.34□□□□□ -0.27
ECM1-201ENST00000346569 STK32BQ9NY57 414 aa13.34□□□□□ -0.27
ECM1-201ENST00000346569 SGSM2O43147 1006 aa13.33□□□□□ -0.28
ECM1-201ENST00000346569 MSH5O43196 834 aa13.33□□□□□ -0.28
ECM1-201ENST00000346569 EPB41L2O43491 1005 aaKnown RBP13.33□□□□□ -0.28
ECM1-201ENST00000346569 REC8O95072 547 aa13.33□□□□□ -0.28
ECM1-201ENST00000346569 IFIT1P09914 478 aaKnown RBP13.33□□□□□ -0.28
ECM1-201ENST00000346569 HOXA10P31260 410 aaPredicted RBP13.33□□□□□ -0.28
ECM1-201ENST00000346569 ST5P78524 1137 aa13.33□□□□□ -0.28
ECM1-201ENST00000346569 IPO9Q96P70 1041 aaKnown RBP13.33□□□□□ -0.28
ECM1-201ENST00000346569 UTRNP46939 3433 aa13.33□□□□□ -0.28
ECM1-201ENST00000346569 HIP1O00291 1037 aa13.32□□□□□ -0.28
ECM1-201ENST00000346569 NPHP1O15259 732 aa13.32□□□□□ -0.28
ECM1-201ENST00000346569 UBE4AQ14139 1066 aa13.32□□□□□ -0.28
ECM1-201ENST00000346569 GORABQ5T7V8 394 aa13.32□□□□□ -0.28
ECM1-201ENST00000346569 KBTBD3Q8NAB2 608 aa13.32□□□□□ -0.28
ECM1-201ENST00000346569 KIF2CQ99661 725 aa13.32□□□□□ -0.28
ECM1-201ENST00000346569 SNRKQ9NRH2 765 aa13.32□□□□□ -0.28
ECM1-201ENST00000346569 NDUFB9Q9Y6M9 179 aa13.32□□□□□ -0.28
ECM1-201ENST00000346569 SLC5A1P13866 664 aa13.31□□□□□ -0.28
ECM1-201ENST00000346569 ARID4AP29374 1257 aaPredicted RBP13.31□□□□□ -0.28
ECM1-201ENST00000346569 GRAPQ13588 217 aa13.31□□□□□ -0.28
ECM1-201ENST00000346569 SCARF1Q14162 830 aa13.31□□□□□ -0.28
ECM1-201ENST00000346569 TTC39AQ5SRH9 613 aa13.31□□□□□ -0.28
ECM1-201ENST00000346569 CCDC102BQ68D86 513 aa13.31□□□□□ -0.28
ECM1-201ENST00000346569 GRAPLQ8TC17 118 aaPredicted RBP13.31□□□□□ -0.28
ECM1-201ENST00000346569 BRIP1Q9BX63 1249 aa13.31□□□□□ -0.28
ECM1-201ENST00000346569 PAG1Q9NWQ8 432 aa13.31□□□□□ -0.28
ECM1-201ENST00000346569 WTIPA6NIX2 430 aaPredicted RBP13.3□□□□□ -0.28
ECM1-201ENST00000346569 MMP10P09238 476 aa13.3□□□□□ -0.28
ECM1-201ENST00000346569 MCAMP43121 646 aa13.3□□□□□ -0.28
ECM1-201ENST00000346569 PHKA1P46020 1223 aa13.3□□□□□ -0.28
ECM1-201ENST00000346569 RUFY2Q8WXA3 655 aa13.3□□□□□ -0.28
ECM1-201ENST00000346569 CRAMP1Q96RY5 1269 aa13.3□□□□□ -0.28
ECM1-201ENST00000346569 DNAJC2Q99543 621 aaKnown RBP13.3□□□□□ -0.28
ECM1-201ENST00000346569 PARP3Q9Y6F1 533 aa13.3□□□□□ -0.28
ECM1-201ENST00000346569 CASZ1Q86V15 1759 aa13.3□□□□□ -0.28
ECM1-201ENST00000346569 TAF1P21675 1872 aa13.3□□□□□ -0.28
ECM1-201ENST00000346569 GOLIM4O00461 696 aa13.3□□□□□ -0.28
ECM1-201ENST00000346569 BBOX1O75936 387 aa13.3□□□□□ -0.28
ECM1-201ENST00000346569 UQCRFS1P1P0C7P4 283 aa13.3□□□□□ -0.28
ECM1-201ENST00000346569 ZAP70P43403 619 aa13.3□□□□□ -0.28
ECM1-201ENST00000346569 CWC27Q6UX04 472 aaKnown RBP13.3□□□□□ -0.28
ECM1-201ENST00000346569 DDRGK1Q96HY6 314 aa13.3□□□□□ -0.28
ECM1-201ENST00000346569 RBM17Q96I25 401 aaKnown RBP13.3□□□□□ -0.28
ECM1-201ENST00000346569 FSD1Q9BTV5 496 aa13.3□□□□□ -0.28
ECM1-201ENST00000346569 ANKRD2Q9GZV1 360 aa13.3□□□□□ -0.28
ECM1-201ENST00000346569 ANTXR1Q9H6X2 564 aa13.3□□□□□ -0.28
ECM1-201ENST00000346569 DIAPH3Q9NSV4 1193 aa13.3□□□□□ -0.28
ECM1-201ENST00000346569 TNRC6CQ9HCJ0 1690 aaKnown RBP13.29□□□□□ -0.28
ECM1-201ENST00000346569 NRXN2Q9P2S2 1712 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms