RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 CA12O43570 354 aa16.97■□□□□ 0.31
HERPUD1-202ENST00000344114 CELF2O95319 508 aaKnown RBP16.97■□□□□ 0.31
HERPUD1-202ENST00000344114 SLC10A5Q5PT55 438 aa16.97■□□□□ 0.31
HERPUD1-202ENST00000344114 ITPRIPQ8IWB1 547 aa16.97■□□□□ 0.31
HERPUD1-202ENST00000344114 TMEM57Q8N5G2 664 aa16.97■□□□□ 0.31
HERPUD1-202ENST00000344114 NLRP3Q96P20 1036 aa16.97■□□□□ 0.31
HERPUD1-202ENST00000344114 TSKSQ9UJT2 592 aa16.97■□□□□ 0.31
HERPUD1-202ENST00000344114 LRP10Q7Z4F1 713 aa16.96■□□□□ 0.31
HERPUD1-202ENST00000344114 SUPT20HQ8NEM7 779 aa16.96■□□□□ 0.31
HERPUD1-202ENST00000344114 CHMP4AQ9BY43 222 aa16.96■□□□□ 0.31
HERPUD1-202ENST00000344114 GLIS2Q9BZE0 524 aaPredicted RBP16.96■□□□□ 0.31
HERPUD1-202ENST00000344114 LRRC37AA6NMS7 1700 aa16.96■□□□□ 0.3
HERPUD1-202ENST00000344114 HOXB7P09629 217 aa16.95■□□□□ 0.3
HERPUD1-202ENST00000344114 GMPSP49915 693 aaPredicted RBP16.95■□□□□ 0.3
HERPUD1-202ENST00000344114 ZC3H15Q8WU90 426 aaKnown RBP16.95■□□□□ 0.3
HERPUD1-202ENST00000344114 TMX4Q9H1E5 349 aaPredicted RBP16.95■□□□□ 0.3
HERPUD1-202ENST00000344114 DUOX1Q9NRD9 1551 aa16.94■□□□□ 0.3
HERPUD1-202ENST00000344114 KIAA2012Q0VF49 1180 aa16.94■□□□□ 0.3
HERPUD1-202ENST00000344114 CCDC30Q5VVM6 783 aa16.94■□□□□ 0.3
HERPUD1-202ENST00000344114 CIAPIN1Q6FI81 312 aa16.94■□□□□ 0.3
HERPUD1-202ENST00000344114 SP8Q8IXZ3 490 aa16.94■□□□□ 0.3
HERPUD1-202ENST00000344114 MCOLN1Q9GZU1 580 aa16.94■□□□□ 0.3
HERPUD1-202ENST00000344114 TAF1P21675 1872 aa16.94■□□□□ 0.3
HERPUD1-202ENST00000344114 HIRAP54198 1017 aaPredicted RBP16.93■□□□□ 0.3
HERPUD1-202ENST00000344114 PDIA6Q15084 440 aa16.93■□□□□ 0.3
HERPUD1-202ENST00000344114 UTP14AQ9BVJ6 771 aaKnown RBP16.93■□□□□ 0.3
HERPUD1-202ENST00000344114 STK31Q9BXU1 1019 aa16.93■□□□□ 0.3
HERPUD1-202ENST00000344114 BBOX1O75936 387 aa16.92■□□□□ 0.3
HERPUD1-202ENST00000344114 DPP8Q6V1X1 898 aaPredicted RBP16.92■□□□□ 0.3
HERPUD1-202ENST00000344114 TNIP1Q15025 636 aa16.91■□□□□ 0.3
HERPUD1-202ENST00000344114 CDC37L1Q7L3B6 337 aa16.91■□□□□ 0.3
HERPUD1-202ENST00000344114 MPNDQ8N594 471 aa16.91■□□□□ 0.3
HERPUD1-202ENST00000344114 TRPM4Q8TD43 1214 aa16.91■□□□□ 0.3
HERPUD1-202ENST00000344114 DDX60Q8IY21 1712 aaKnown RBP16.91■□□□□ 0.3
HERPUD1-202ENST00000344114 RWDD1Q9H446 243 aaPredicted RBP16.9■□□□□ 0.3
HERPUD1-202ENST00000344114 YDJCA8MPS7 323 aa16.89■□□□□ 0.3
HERPUD1-202ENST00000344114 RAD17O75943 681 aa16.89■□□□□ 0.3
HERPUD1-202ENST00000344114 SLC4A2P04920 1241 aa16.89■□□□□ 0.3
HERPUD1-202ENST00000344114 ZNF408Q9H9D4 720 aa16.89■□□□□ 0.3
HERPUD1-202ENST00000344114 ZBTB40Q9NUA8 1239 aa16.89■□□□□ 0.3
HERPUD1-202ENST00000344114 CNOT7Q9UIV1 285 aaKnown RBP16.89■□□□□ 0.3
HERPUD1-202ENST00000344114 PCDHB15Q9Y5E8 787 aa16.89■□□□□ 0.3
HERPUD1-202ENST00000344114 POLR2AP24928 1970 aaKnown RBP16.89■□□□□ 0.29
HERPUD1-202ENST00000344114 IGHDP01880 384 aa16.89■□□□□ 0.29
HERPUD1-202ENST00000344114 NOGQ13253 232 aa16.89■□□□□ 0.29
HERPUD1-202ENST00000344114 GRAPQ13588 217 aa16.89■□□□□ 0.29
HERPUD1-202ENST00000344114 INTS3Q68E01 1043 aaKnown RBP16.89■□□□□ 0.29
HERPUD1-202ENST00000344114 GRAPLQ8TC17 118 aaPredicted RBP16.89■□□□□ 0.29
HERPUD1-202ENST00000344114 SHTN1A0MZ66 631 aa16.88■□□□□ 0.29
HERPUD1-202ENST00000344114 DGKZQ13574 1117 aa16.88■□□□□ 0.29
HERPUD1-202ENST00000344114 PROSER3Q2NL68 480 aa16.88■□□□□ 0.29
HERPUD1-202ENST00000344114 HSP90AB3PQ58FF7 597 aa16.88■□□□□ 0.29
HERPUD1-202ENST00000344114 HDGFL1Q5TGJ6 251 aa16.88■□□□□ 0.29
HERPUD1-202ENST00000344114 NLRP10Q86W26 655 aa16.88■□□□□ 0.29
HERPUD1-202ENST00000344114 ZIC5Q96T25 663 aa16.88■□□□□ 0.29
HERPUD1-202ENST00000344114 HCLS1P14317 486 aaPredicted RBP16.87■□□□□ 0.29
HERPUD1-202ENST00000344114 EIF2S2P20042 333 aaKnown RBP16.87■□□□□ 0.29
HERPUD1-202ENST00000344114 HDAC1Q13547 482 aaPredicted RBP16.87■□□□□ 0.29
HERPUD1-202ENST00000344114 DDX46Q7L014 1031 aaKnown RBP16.87■□□□□ 0.29
HERPUD1-202ENST00000344114 TMC4Q7Z404 712 aa16.87■□□□□ 0.29
HERPUD1-202ENST00000344114 MICALL2Q8IY33 904 aa16.87■□□□□ 0.29
HERPUD1-202ENST00000344114 DPF2Q92785 391 aa16.87■□□□□ 0.29
HERPUD1-202ENST00000344114 PCDH10Q9P2E7 1040 aa16.87■□□□□ 0.29
HERPUD1-202ENST00000344114 AKAP11Q9UKA4 1901 aa16.86■□□□□ 0.29
HERPUD1-202ENST00000344114 H7C1D1 291 aa16.86■□□□□ 0.29
HERPUD1-202ENST00000344114 ZBTB7BO15156 539 aaPredicted RBP16.86■□□□□ 0.29
HERPUD1-202ENST00000344114 TNRC18O15417 2968 aaPredicted RBP16.86■□□□□ 0.29
HERPUD1-202ENST00000344114 ANXA1P04083 346 aa16.86■□□□□ 0.29
HERPUD1-202ENST00000344114 HUNKP57058 714 aa16.86■□□□□ 0.29
HERPUD1-202ENST00000344114 USP48Q86UV5 1035 aa16.86■□□□□ 0.29
HERPUD1-202ENST00000344114 FAM155AB1AL88 458 aaPredicted RBP16.85■□□□□ 0.29
HERPUD1-202ENST00000344114 FLIIQ13045 1269 aa16.85■□□□□ 0.29
HERPUD1-202ENST00000344114 SH3TC1Q8TE82 1336 aa16.85■□□□□ 0.29
HERPUD1-202ENST00000344114 TCIRG1Q13488 830 aa16.84■□□□□ 0.29
HERPUD1-202ENST00000344114 COPS6Q7L5N1 327 aa16.84■□□□□ 0.29
HERPUD1-202ENST00000344114 SAGE1Q9NXZ1 904 aa16.84■□□□□ 0.29
HERPUD1-202ENST00000344114 TRMT112Q9UI30 125 aaKnown RBP16.84■□□□□ 0.29
HERPUD1-202ENST00000344114 ZBTB12Q9Y330 459 aaPredicted RBP16.84■□□□□ 0.29
HERPUD1-202ENST00000344114 COL4A1P02462 1669 aa16.83■□□□□ 0.29
HERPUD1-202ENST00000344114 PSMD14O00487 310 aa16.83■□□□□ 0.28
HERPUD1-202ENST00000344114 CCT4P50991 539 aaKnown RBP16.83■□□□□ 0.28
HERPUD1-202ENST00000344114 RGMBQ6NW40 437 aa16.83■□□□□ 0.28
HERPUD1-202ENST00000344114 DLK2Q6UY11 383 aa16.83■□□□□ 0.28
HERPUD1-202ENST00000344114 G2E3Q7L622 706 aa16.83■□□□□ 0.28
HERPUD1-202ENST00000344114 SAMD7Q7Z3H4 446 aa16.83■□□□□ 0.28
HERPUD1-202ENST00000344114 XAGE3Q8WTP9 111 aa16.83■□□□□ 0.28
HERPUD1-202ENST00000344114 WASHC4Q2M389 1173 aa16.82■□□□□ 0.28
HERPUD1-202ENST00000344114 GBA2Q9HCG7 927 aaPredicted RBP16.82■□□□□ 0.28
HERPUD1-202ENST00000344114 SCN9AQ15858 1988 aa16.82■□□□□ 0.28
HERPUD1-202ENST00000344114 EGFRP00533 1210 aa16.81■□□□□ 0.28
HERPUD1-202ENST00000344114 RPS12P25398 132 aaKnown RBP16.81■□□□□ 0.28
HERPUD1-202ENST00000344114 AIMP1Q12904 312 aaKnown RBP16.81■□□□□ 0.28
HERPUD1-202ENST00000344114 FKBP5Q13451 457 aaPredicted RBP16.81■□□□□ 0.28
HERPUD1-202ENST00000344114 KRT26Q7Z3Y9 468 aa16.81■□□□□ 0.28
HERPUD1-202ENST00000344114 PSME4Q14997 1843 aa16.81■□□□□ 0.28
HERPUD1-202ENST00000344114 TBC1D10BQ4KMP7 808 aaPredicted RBP16.8■□□□□ 0.28
HERPUD1-202ENST00000344114 C2orf69Q8N8R5 385 aa16.8■□□□□ 0.28
HERPUD1-202ENST00000344114 NECTIN2Q92692 538 aa16.8■□□□□ 0.28
HERPUD1-202ENST00000344114 CCDC102AQ96A19 550 aa16.8■□□□□ 0.28
HERPUD1-202ENST00000344114 DBNDD1Q9H9R9 158 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms