RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 HELBQ8NG08 1087 aaPredicted RBP9.36□□□□□ -0.91
ZNF540-202ENST00000343599 TMX4Q9H1E5 349 aaPredicted RBP9.36□□□□□ -0.91
ZNF540-202ENST00000343599 SPEF2Q9C093 1822 aa9.36□□□□□ -0.91
ZNF540-202ENST00000343599 MANSC4A6NHS7 340 aaPredicted RBP9.35□□□□□ -0.91
ZNF540-202ENST00000343599 APBB1O00213 710 aa9.35□□□□□ -0.91
ZNF540-202ENST00000343599 EIF4A1P60842 406 aaKnown RBP9.35□□□□□ -0.91
ZNF540-202ENST00000343599 PRDM4Q9UKN5 801 aa9.35□□□□□ -0.91
ZNF540-202ENST00000343599 NFE2L2Q16236 605 aa9.35□□□□□ -0.91
ZNF540-202ENST00000343599 MSL1Q68DK7 614 aa9.35□□□□□ -0.91
ZNF540-202ENST00000343599 KCTD17Q8N5Z5 321 aa9.35□□□□□ -0.91
ZNF540-202ENST00000343599 COL4A6Q14031 1691 aa9.35□□□□□ -0.91
ZNF540-202ENST00000343599 RAD21O60216 631 aa9.35□□□□□ -0.91
ZNF540-202ENST00000343599 LDLRAD1Q5T700 205 aa9.35□□□□□ -0.91
ZNF540-202ENST00000343599 RGMBQ6NW40 437 aa9.35□□□□□ -0.91
ZNF540-202ENST00000343599 SCN9AQ15858 1988 aa9.34□□□□□ -0.91
ZNF540-202ENST00000343599 ZNF541Q9H0D2 1346 aa9.34□□□□□ -0.91
ZNF540-202ENST00000343599 IRS2Q9Y4H2 1338 aa9.34□□□□□ -0.91
ZNF540-202ENST00000343599 ROBO3Q96MS0 1386 aa9.34□□□□□ -0.91
ZNF540-202ENST00000343599 ATP2B4P23634 1241 aa9.34□□□□□ -0.91
ZNF540-202ENST00000343599 PODNQ7Z5L7 613 aa9.34□□□□□ -0.91
ZNF540-202ENST00000343599 ANKLE1Q8NAG6 615 aa9.34□□□□□ -0.91
ZNF540-202ENST00000343599 TMEM265A0A087WTH1 108 aa9.34□□□□□ -0.91
ZNF540-202ENST00000343599 CIAPIN1Q6FI81 312 aa9.34□□□□□ -0.91
ZNF540-202ENST00000343599 HYPKQ9NX55 129 aa9.34□□□□□ -0.91
ZNF540-202ENST00000343599 LEMD3Q9Y2U8 911 aa9.34□□□□□ -0.91
ZNF540-202ENST00000343599 PLBD2Q8NHP8 589 aa9.33□□□□□ -0.92
ZNF540-202ENST00000343599 RBM42Q9BTD8 480 aaKnown RBP9.33□□□□□ -0.92
ZNF540-202ENST00000343599 SLC24A3Q9HC58 644 aa9.33□□□□□ -0.92
ZNF540-202ENST00000343599 HSP90AA1P07900 732 aaKnown RBP9.33□□□□□ -0.92
ZNF540-202ENST00000343599 RBM25P49756 843 aaKnown RBP9.33□□□□□ -0.92
ZNF540-202ENST00000343599 RASSF7Q02833 373 aa9.33□□□□□ -0.92
ZNF540-202ENST00000343599 BEGAINQ9BUH8 593 aa9.33□□□□□ -0.92
ZNF540-202ENST00000343599 UTP14AQ9BVJ6 771 aaKnown RBP9.33□□□□□ -0.92
ZNF540-202ENST00000343599 SRP68Q9UHB9 627 aaKnown RBP9.33□□□□□ -0.92
ZNF540-202ENST00000343599 BTBD11A6QL63 1104 aa9.32□□□□□ -0.92
ZNF540-202ENST00000343599 ZNF853P0CG23 659 aa9.32□□□□□ -0.92
ZNF540-202ENST00000343599 IRX6P78412 446 aaPredicted RBP9.32□□□□□ -0.92
ZNF540-202ENST00000343599 NBPF5PQ86XG9 351 aaPredicted RBP9.32□□□□□ -0.92
ZNF540-202ENST00000343599 NKX2-3Q8TAU0 364 aa9.32□□□□□ -0.92
ZNF540-202ENST00000343599 PRO3102Q9H379 93 aa9.32□□□□□ -0.92
ZNF540-202ENST00000343599 LTBP2Q14767 1821 aa9.32□□□□□ -0.92
ZNF540-202ENST00000343599 PTPRFP10586 1907 aa9.32□□□□□ -0.92
ZNF540-202ENST00000343599 TCIRG1Q13488 830 aa9.32□□□□□ -0.92
ZNF540-202ENST00000343599 TRMT44Q8IYL2 757 aaKnown RBP9.32□□□□□ -0.92
ZNF540-202ENST00000343599 ERO1AQ96HE7 468 aa9.32□□□□□ -0.92
ZNF540-202ENST00000343599 MAF1Q9H063 256 aa9.32□□□□□ -0.92
ZNF540-202ENST00000343599 USHBP1Q8N6Y0 703 aa9.31□□□□□ -0.92
ZNF540-202ENST00000343599 PHF14O94880 888 aa9.31□□□□□ -0.92
ZNF540-202ENST00000343599 HSPA5P11021 654 aaKnown RBP9.31□□□□□ -0.92
ZNF540-202ENST00000343599 C2orf69Q8N8R5 385 aa9.31□□□□□ -0.92
ZNF540-202ENST00000343599 NLRP3Q96P20 1036 aa9.31□□□□□ -0.92
ZNF540-202ENST00000343599 PCCAP05165 728 aaPredicted RBP9.3□□□□□ -0.92
ZNF540-202ENST00000343599 CHRNA5P30532 468 aa9.3□□□□□ -0.92
ZNF540-202ENST00000343599 NOL9Q5SY16 702 aaKnown RBP9.3□□□□□ -0.92
ZNF540-202ENST00000343599 FRAT1Q92837 279 aaPredicted RBP9.3□□□□□ -0.92
ZNF540-202ENST00000343599 LTV1Q96GA3 475 aaPredicted RBP9.3□□□□□ -0.92
ZNF540-202ENST00000343599 CHL1O00533 1208 aa9.3□□□□□ -0.92
ZNF540-202ENST00000343599 CST9Q5W186 159 aa9.3□□□□□ -0.92
ZNF540-202ENST00000343599 RASAL3Q86YV0 1011 aa9.3□□□□□ -0.92
ZNF540-202ENST00000343599 CCDC191Q8NCU4 936 aa9.3□□□□□ -0.92
ZNF540-202ENST00000343599 ANKRD2Q9GZV1 360 aa9.3□□□□□ -0.92
ZNF540-202ENST00000343599 H7C1D1 291 aa9.3□□□□□ -0.92
ZNF540-202ENST00000343599 GTF3C2Q8WUA4 911 aaPredicted RBP9.3□□□□□ -0.92
ZNF540-202ENST00000343599 SPINK5Q9NQ38 1064 aaPredicted RBP9.3□□□□□ -0.92
ZNF540-202ENST00000343599 ATAD5Q96QE3 1844 aa9.29□□□□□ -0.92
ZNF540-202ENST00000343599 ABCC4O15439 1325 aa9.29□□□□□ -0.92
ZNF540-202ENST00000343599 NBPF26B4DH59 902 aa9.29□□□□□ -0.92
ZNF540-202ENST00000343599 MNX1P50219 401 aaPredicted RBP9.29□□□□□ -0.92
ZNF540-202ENST00000343599 IRF5Q13568 498 aa9.29□□□□□ -0.92
ZNF540-202ENST00000343599 PDIA6Q15084 440 aa9.29□□□□□ -0.92
ZNF540-202ENST00000343599 B4GALNT3Q6L9W6 998 aa9.29□□□□□ -0.92
ZNF540-202ENST00000343599 NBPF10Q6P3W6 841 aaKnown RBP9.29□□□□□ -0.92
ZNF540-202ENST00000343599 RPGRQ92834 1020 aaKnown RBP9.29□□□□□ -0.92
ZNF540-202ENST00000343599 COA1Q9GZY4 146 aa9.29□□□□□ -0.92
ZNF540-202ENST00000343599 SH3TC1Q8TE82 1336 aa9.29□□□□□ -0.92
ZNF540-202ENST00000343599 ATXN8OSP0DMR3 200 aa9.29□□□□□ -0.92
ZNF540-202ENST00000343599 SEZ6LQ9BYH1 1024 aa9.29□□□□□ -0.92
ZNF540-202ENST00000343599 MCOLN1Q9GZU1 580 aa9.29□□□□□ -0.92
ZNF540-202ENST00000343599 ADGRA2Q96PE1 1338 aa9.28□□□□□ -0.92
ZNF540-202ENST00000343599 STRIP1Q5VSL9 837 aa9.28□□□□□ -0.92
ZNF540-202ENST00000343599 UTYO14607 1347 aa9.28□□□□□ -0.92
ZNF540-202ENST00000343599 C21orf2O43822 256 aa9.28□□□□□ -0.92
ZNF540-202ENST00000343599 UBE2Q1Q7Z7E8 422 aa9.28□□□□□ -0.92
ZNF540-202ENST00000343599 RTF1Q92541 710 aaKnown RBP9.28□□□□□ -0.92
ZNF540-202ENST00000343599 RRAGDQ9NQL2 400 aaPredicted RBP9.28□□□□□ -0.92
ZNF540-202ENST00000343599 LAS1LQ9Y4W2 734 aaKnown RBP9.28□□□□□ -0.92
ZNF540-202ENST00000343599 MAP3K10Q02779 954 aa9.28□□□□□ -0.92
ZNF540-202ENST00000343599 LGR6Q9HBX8 967 aa9.28□□□□□ -0.92
ZNF540-202ENST00000343599 PLXNB2O15031 1838 aa9.27□□□□□ -0.93
ZNF540-202ENST00000343599 WWC1Q8IX03 1113 aa9.27□□□□□ -0.93
ZNF540-202ENST00000343599 GPR101Q96P66 508 aaPredicted RBP9.27□□□□□ -0.93
ZNF540-202ENST00000343599 GBA2Q9HCG7 927 aaPredicted RBP9.27□□□□□ -0.93
ZNF540-202ENST00000343599 IFT57Q9NWB7 429 aa9.27□□□□□ -0.93
ZNF540-202ENST00000343599 XDHP47989 1333 aa9.27□□□□□ -0.93
ZNF540-202ENST00000343599 OTUD7BQ6GQQ9 843 aa9.26□□□□□ -0.93
ZNF540-202ENST00000343599 RSBN1LQ6PCB5 846 aaPredicted RBP9.26□□□□□ -0.93
ZNF540-202ENST00000343599 CDC5LQ99459 802 aaKnown RBP9.26□□□□□ -0.93
ZNF540-202ENST00000343599 POLR3GLQ9BT43 218 aa9.26□□□□□ -0.93
ZNF540-202ENST00000343599 SALL1Q9NSC2 1324 aa9.26□□□□□ -0.93
ZNF540-202ENST00000343599 ANKRD13DQ6ZTN6 518 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms