RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 PFKFB2O60825 505 aa9.74□□□□□ -0.85
CFAP54-201ENST00000342887 FGFR2P21802 821 aa9.74□□□□□ -0.85
CFAP54-201ENST00000342887 CCDC191Q8NCU4 936 aa9.74□□□□□ -0.85
CFAP54-201ENST00000342887 FMNL2Q96PY5 1086 aa9.74□□□□□ -0.85
CFAP54-201ENST00000342887 ZKSCAN5Q9Y2L8 839 aa9.74□□□□□ -0.85
CFAP54-201ENST00000342887 ARFGEF1Q9Y6D6 1849 aa9.74□□□□□ -0.85
CFAP54-201ENST00000342887 MCCP23508 829 aa9.74□□□□□ -0.85
CFAP54-201ENST00000342887 GTF2E1P29083 439 aaPredicted RBP9.74□□□□□ -0.85
CFAP54-201ENST00000342887 ANKRD13DQ6ZTN6 518 aa9.74□□□□□ -0.85
CFAP54-201ENST00000342887 KBTBD3Q8NAB2 608 aa9.74□□□□□ -0.85
CFAP54-201ENST00000342887 TEFQ10587 303 aa9.74□□□□□ -0.85
CFAP54-201ENST00000342887 C1orf141Q5JVX7 400 aa9.74□□□□□ -0.85
CFAP54-201ENST00000342887 FAM184AQ8NB25 1140 aa9.74□□□□□ -0.85
CFAP54-201ENST00000342887 USP25Q9UHP3 1055 aa9.74□□□□□ -0.85
CFAP54-201ENST00000342887 C10orf71Q711Q0 1435 aa9.73□□□□□ -0.85
CFAP54-201ENST00000342887 CYP21A2P08686 494 aa9.73□□□□□ -0.85
CFAP54-201ENST00000342887 COPS6Q7L5N1 327 aa9.73□□□□□ -0.85
CFAP54-201ENST00000342887 KIF13BQ9NQT8 1826 aa9.73□□□□□ -0.85
CFAP54-201ENST00000342887 SNW1Q13573 536 aaKnown RBP9.73□□□□□ -0.85
CFAP54-201ENST00000342887 PLA2G4DQ86XP0 818 aa9.72□□□□□ -0.85
CFAP54-201ENST00000342887 CLASRPQ8N2M8 674 aaKnown RBP9.72□□□□□ -0.85
CFAP54-201ENST00000342887 RIPOR2Q9Y4F9 1068 aa9.72□□□□□ -0.85
CFAP54-201ENST00000342887 PRPF40AO75400 957 aaKnown RBP9.72□□□□□ -0.85
CFAP54-201ENST00000342887 DDX58O95786 925 aaKnown RBP9.72□□□□□ -0.85
CFAP54-201ENST00000342887 CCDC183Q5T5S1 534 aa9.72□□□□□ -0.85
CFAP54-201ENST00000342887 ANO2Q9NQ90 1003 aa9.72□□□□□ -0.85
CFAP54-201ENST00000342887 TTC6Q86TZ1 520 aa9.72□□□□□ -0.85
CFAP54-201ENST00000342887 NKX2-3Q8TAU0 364 aa9.72□□□□□ -0.85
CFAP54-201ENST00000342887 PGBD1Q96JS3 809 aa9.72□□□□□ -0.85
CFAP54-201ENST00000342887 HPS5Q9UPZ3 1129 aa9.72□□□□□ -0.85
CFAP54-201ENST00000342887 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.72□□□□□ -0.85
CFAP54-201ENST00000342887 DDX49Q9Y6V7 483 aaKnown RBP9.72□□□□□ -0.85
CFAP54-201ENST00000342887 LETM1O95202 739 aaPredicted RBP9.71□□□□□ -0.85
CFAP54-201ENST00000342887 TATP17735 454 aaPredicted RBP9.71□□□□□ -0.85
CFAP54-201ENST00000342887 ARID4AP29374 1257 aaPredicted RBP9.71□□□□□ -0.85
CFAP54-201ENST00000342887 CAVIN1Q6NZI2 390 aaKnown RBP9.71□□□□□ -0.85
CFAP54-201ENST00000342887 RUFY2Q8WXA3 655 aa9.71□□□□□ -0.85
CFAP54-201ENST00000342887 RBM33Q96EV2 1170 aaKnown RBP9.71□□□□□ -0.85
CFAP54-201ENST00000342887 KCNF1Q9H3M0 494 aa9.71□□□□□ -0.85
CFAP54-201ENST00000342887 KDM4FA0A1W2PPD8 638 aa9.71□□□□□ -0.85
CFAP54-201ENST00000342887 FDPSP14324 419 aaKnown RBP9.71□□□□□ -0.85
CFAP54-201ENST00000342887 CDC25BP30305 580 aa9.71□□□□□ -0.85
CFAP54-201ENST00000342887 TFCP2Q12800 502 aa9.71□□□□□ -0.85
CFAP54-201ENST00000342887 NAA16Q6N069 864 aaPredicted RBP9.71□□□□□ -0.85
CFAP54-201ENST00000342887 SARM1Q6SZW1 724 aa9.71□□□□□ -0.85
CFAP54-201ENST00000342887 ELOA2Q8IYF1 753 aaPredicted RBP9.71□□□□□ -0.85
CFAP54-201ENST00000342887 AK7Q96M32 723 aa9.71□□□□□ -0.85
CFAP54-201ENST00000342887 UPF3BQ9BZI7 483 aaKnown RBP9.71□□□□□ -0.85
CFAP54-201ENST00000342887 PCCAP05165 728 aaPredicted RBP9.71□□□□□ -0.86
CFAP54-201ENST00000342887 SLC39A6Q13433 755 aa9.71□□□□□ -0.86
CFAP54-201ENST00000342887 MB21D2Q8IYB1 491 aaPredicted RBP9.71□□□□□ -0.86
CFAP54-201ENST00000342887 NECTIN2Q92692 538 aa9.71□□□□□ -0.86
CFAP54-201ENST00000342887 CNPY2Q9Y2B0 182 aa9.71□□□□□ -0.86
CFAP54-201ENST00000342887 MAST3O60307 1309 aa9.7□□□□□ -0.86
CFAP54-201ENST00000342887 GJB2P29033 226 aa9.7□□□□□ -0.86
CFAP54-201ENST00000342887 NSUN7Q8NE18 718 aaKnown RBP9.7□□□□□ -0.86
CFAP54-201ENST00000342887 TACC3Q9Y6A5 838 aa9.7□□□□□ -0.86
CFAP54-201ENST00000342887 BAZ2AQ9UIF9 1905 aaKnown RBP9.7□□□□□ -0.86
CFAP54-201ENST00000342887 CHGBP05060 677 aa9.7□□□□□ -0.86
CFAP54-201ENST00000342887 ATL3Q6DD88 541 aa9.7□□□□□ -0.86
CFAP54-201ENST00000342887 CWC27Q6UX04 472 aaKnown RBP9.7□□□□□ -0.86
CFAP54-201ENST00000342887 AACSQ86V21 672 aa9.7□□□□□ -0.86
CFAP54-201ENST00000342887 CASTP20810 708 aaKnown RBP9.7□□□□□ -0.86
CFAP54-201ENST00000342887 CDC37L1Q7L3B6 337 aa9.7□□□□□ -0.86
CFAP54-201ENST00000342887 ZNF274Q96GC6 653 aaPredicted RBP9.7□□□□□ -0.86
CFAP54-201ENST00000342887 PDRG1Q9NUG6 133 aa9.7□□□□□ -0.86
CFAP54-201ENST00000342887 RCOR1Q9UKL0 485 aa9.7□□□□□ -0.86
CFAP54-201ENST00000342887 MRVI1Q9Y6F6 885 aa9.7□□□□□ -0.86
CFAP54-201ENST00000342887 CPA1P15085 419 aa9.69□□□□□ -0.86
CFAP54-201ENST00000342887 IQCB1Q15051 598 aa9.69□□□□□ -0.86
CFAP54-201ENST00000342887 PROSER2Q86WR7 435 aaPredicted RBP9.69□□□□□ -0.86
CFAP54-201ENST00000342887 TDRD7Q8NHU6 1098 aaKnown RBP9.69□□□□□ -0.86
CFAP54-201ENST00000342887 BBXQ8WY36 941 aaPredicted RBP9.69□□□□□ -0.86
CFAP54-201ENST00000342887 ARXQ96QS3 562 aa9.69□□□□□ -0.86
CFAP54-201ENST00000342887 FGRP09769 529 aa9.69□□□□□ -0.86
CFAP54-201ENST00000342887 ANTXR2P58335 489 aa9.69□□□□□ -0.86
CFAP54-201ENST00000342887 SCRN1Q12765 414 aa9.69□□□□□ -0.86
CFAP54-201ENST00000342887 ANKRD1Q15327 319 aa9.69□□□□□ -0.86
CFAP54-201ENST00000342887 ZNF34Q8IZ26 560 aa9.69□□□□□ -0.86
CFAP54-201ENST00000342887 ALX1Q15699 326 aa9.69□□□□□ -0.86
CFAP54-201ENST00000342887 DDX17Q92841 729 aaKnown RBP9.69□□□□□ -0.86
CFAP54-201ENST00000342887 RILPL2Q969X0 211 aa9.69□□□□□ -0.86
CFAP54-201ENST00000342887 LTV1Q96GA3 475 aaPredicted RBP9.69□□□□□ -0.86
CFAP54-201ENST00000342887 BPIFA3Q9BQP9 254 aa9.69□□□□□ -0.86
CFAP54-201ENST00000342887 SYCE3A1L190 88 aa9.68□□□□□ -0.86
CFAP54-201ENST00000342887 MCMDC2Q4G0Z9 681 aa9.68□□□□□ -0.86
CFAP54-201ENST00000342887 TTLL7Q6ZT98 887 aa9.68□□□□□ -0.86
CFAP54-201ENST00000342887 KLHDC4Q8TBB5 520 aa9.68□□□□□ -0.86
CFAP54-201ENST00000342887 HSD3B7Q9H2F3 369 aa9.68□□□□□ -0.86
CFAP54-201ENST00000342887 FOXD4L1Q9NU39 408 aa9.68□□□□□ -0.86
CFAP54-201ENST00000342887 ZNF804BA4D1E1 1349 aa9.68□□□□□ -0.86
CFAP54-201ENST00000342887 GOLGA6L22H0YM25 854 aa9.68□□□□□ -0.86
CFAP54-201ENST00000342887 SOX12O15370 315 aa9.68□□□□□ -0.86
CFAP54-201ENST00000342887 EIF2S2P20042 333 aaKnown RBP9.68□□□□□ -0.86
CFAP54-201ENST00000342887 IL15P40933 162 aaPredicted RBP9.68□□□□□ -0.86
CFAP54-201ENST00000342887 PRPF40BQ6NWY9 871 aaKnown RBP9.68□□□□□ -0.86
CFAP54-201ENST00000342887 MYD88Q99836 296 aa9.68□□□□□ -0.86
CFAP54-201ENST00000342887 DBNDD2Q9BQY9 259 aa9.68□□□□□ -0.86
CFAP54-201ENST00000342887 CYP46A1Q9Y6A2 500 aa9.68□□□□□ -0.86
CFAP54-201ENST00000342887 U3KPZ7 1027 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms