RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 A2MP01023 1474 aa17.17■□□□□ 0.34
UBE3B-202ENST00000342494 SPDYE3A6NKU9 549 aa17.17■□□□□ 0.34
UBE3B-202ENST00000342494 GCP02774 474 aa17.17■□□□□ 0.34
UBE3B-202ENST00000342494 MCM3P25205 808 aa17.17■□□□□ 0.34
UBE3B-202ENST00000342494 STAT6P42226 847 aa17.17■□□□□ 0.34
UBE3B-202ENST00000342494 DHX37Q8IY37 1157 aaKnown RBP17.17■□□□□ 0.34
UBE3B-202ENST00000342494 STK32BQ9NY57 414 aa17.17■□□□□ 0.34
UBE3B-202ENST00000342494 FLT4P35916 1363 aa17.17■□□□□ 0.34
UBE3B-202ENST00000342494 KRT13P13646 458 aa17.17■□□□□ 0.34
UBE3B-202ENST00000342494 NCBP1Q09161 790 aaKnown RBP17.17■□□□□ 0.34
UBE3B-202ENST00000342494 LINS1Q8NG48 757 aa17.17■□□□□ 0.34
UBE3B-202ENST00000342494 BTG4Q9NY30 223 aa17.17■□□□□ 0.34
UBE3B-202ENST00000342494 CALM1P0DP23 149 aa17.17■□□□□ 0.34
UBE3B-202ENST00000342494 CALM2P0DP24 149 aa17.17■□□□□ 0.34
UBE3B-202ENST00000342494 CALM3P0DP25 149 aa17.17■□□□□ 0.34
UBE3B-202ENST00000342494 PSMD1Q99460 953 aa17.17■□□□□ 0.34
UBE3B-202ENST00000342494 GCOM1H8Y6P7 765 aaPredicted RBP17.16■□□□□ 0.34
UBE3B-202ENST00000342494 MYZAPP0CAP1 466 aa17.16■□□□□ 0.34
UBE3B-202ENST00000342494 MTHFSDQ2M296 383 aaKnown RBP17.16■□□□□ 0.34
UBE3B-202ENST00000342494 PLCH2O75038 1416 aa17.16■□□□□ 0.34
UBE3B-202ENST00000342494 GNAT2P19087 354 aa17.16■□□□□ 0.34
UBE3B-202ENST00000342494 TNNI2P48788 182 aa17.16■□□□□ 0.34
UBE3B-202ENST00000342494 TMC6Q7Z403 805 aa17.16■□□□□ 0.34
UBE3B-202ENST00000342494 LDHBP07195 334 aaKnown RBP17.16■□□□□ 0.34
UBE3B-202ENST00000342494 NAA15Q9BXJ9 866 aaKnown RBP17.16■□□□□ 0.34
UBE3B-202ENST00000342494 PAG1Q9NWQ8 432 aa17.16■□□□□ 0.34
UBE3B-202ENST00000342494 PCDH11XQ9BZA7 1347 aa17.16■□□□□ 0.34
UBE3B-202ENST00000342494 PCDH11YQ9BZA8 1340 aa17.16■□□□□ 0.34
UBE3B-202ENST00000342494 TBC1D5Q92609 795 aa17.16■□□□□ 0.34
UBE3B-202ENST00000342494 TTC16Q8NEE8 873 aa17.16■□□□□ 0.34
UBE3B-202ENST00000342494 ESPNB1AK53 854 aa17.15■□□□□ 0.34
UBE3B-202ENST00000342494 RBM17Q96I25 401 aaKnown RBP17.15■□□□□ 0.34
UBE3B-202ENST00000342494 SPAG5Q96R06 1193 aa17.15■□□□□ 0.34
UBE3B-202ENST00000342494 RBM8AQ9Y5S9 174 aaKnown RBP17.15■□□□□ 0.34
UBE3B-202ENST00000342494 RALGAPBQ86X10 1494 aa17.15■□□□□ 0.34
UBE3B-202ENST00000342494 STAMBPO95630 424 aa17.15■□□□□ 0.34
UBE3B-202ENST00000342494 SYKP43405 635 aa17.15■□□□□ 0.34
UBE3B-202ENST00000342494 HLTFQ14527 1009 aaKnown RBP eCLIP17.15■□□□□ 0.34
UBE3B-202ENST00000342494 SPECC1Q5M775 1068 aa17.15■□□□□ 0.34
UBE3B-202ENST00000342494 N4BP3O15049 544 aa17.15■□□□□ 0.34
UBE3B-202ENST00000342494 RRAGBQ5VZM2 374 aa17.15■□□□□ 0.34
UBE3B-202ENST00000342494 NECAB1Q8N987 351 aa17.15■□□□□ 0.34
UBE3B-202ENST00000342494 ZRANB1Q9UGI0 708 aa17.15■□□□□ 0.34
UBE3B-202ENST00000342494 URB2Q14146 1524 aaKnown RBP17.15■□□□□ 0.34
UBE3B-202ENST00000342494 ATP8B2P98198 1209 aa17.14■□□□□ 0.34
UBE3B-202ENST00000342494 ZNF354CQ86Y25 554 aa17.14■□□□□ 0.34
UBE3B-202ENST00000342494 MIGA1Q8NAN2 632 aa17.14■□□□□ 0.34
UBE3B-202ENST00000342494 RRP36Q96EU6 259 aaKnown RBP17.14■□□□□ 0.34
UBE3B-202ENST00000342494 RPRD2Q5VT52 1461 aaKnown RBP17.14■□□□□ 0.33
UBE3B-202ENST00000342494 AFMP43652 599 aa17.14■□□□□ 0.33
UBE3B-202ENST00000342494 GSDMDP57764 484 aa17.14■□□□□ 0.33
UBE3B-202ENST00000342494 BIN2Q9UBW5 565 aaPredicted RBP17.14■□□□□ 0.33
UBE3B-202ENST00000342494 GJA3Q9Y6H8 435 aa17.14■□□□□ 0.33
UBE3B-202ENST00000342494 C8orf58Q8NAV2 365 aa17.14■□□□□ 0.33
UBE3B-202ENST00000342494 TCEANC2Q96MN5 208 aa17.14■□□□□ 0.33
UBE3B-202ENST00000342494 IMPG2Q9BZV3 1241 aa17.14■□□□□ 0.33
UBE3B-202ENST00000342494 TMX1Q9H3N1 280 aa17.14■□□□□ 0.33
UBE3B-202ENST00000342494 PA2G4Q9UQ80 394 aaKnown RBP17.14■□□□□ 0.33
UBE3B-202ENST00000342494 LMAN1P49257 510 aa17.14■□□□□ 0.33
UBE3B-202ENST00000342494 CNBD1Q8NA66 436 aa17.14■□□□□ 0.33
UBE3B-202ENST00000342494 TNPO1Q92973 898 aaKnown RBP17.14■□□□□ 0.33
UBE3B-202ENST00000342494 TBC1D2Q9BYX2 928 aa17.14■□□□□ 0.33
UBE3B-202ENST00000342494 RBM27Q9P2N5 1060 aaKnown RBP17.14■□□□□ 0.33
UBE3B-202ENST00000342494 USP25Q9UHP3 1055 aa17.14■□□□□ 0.33
UBE3B-202ENST00000342494 SDSP20132 328 aa17.13■□□□□ 0.33
UBE3B-202ENST00000342494 MAGEB6Q8N7X4 407 aa17.13■□□□□ 0.33
UBE3B-202ENST00000342494 AKR1B10O60218 316 aa17.13■□□□□ 0.33
UBE3B-202ENST00000342494 PDE1AP54750 535 aa17.13■□□□□ 0.33
UBE3B-202ENST00000342494 TRMT1Q9NXH9 659 aaKnown RBP17.13■□□□□ 0.33
UBE3B-202ENST00000342494 BCCIPQ9P287 314 aaKnown RBP eCLIP17.13■□□□□ 0.33
UBE3B-202ENST00000342494 CCNL1Q9UK58 526 aaPredicted RBP17.13■□□□□ 0.33
UBE3B-202ENST00000342494 SBNO2Q9Y2G9 1366 aa17.13■□□□□ 0.33
UBE3B-202ENST00000342494 ZNF165P49910 485 aa17.13■□□□□ 0.33
UBE3B-202ENST00000342494 ZSCAN30Q86W11 494 aa17.13■□□□□ 0.33
UBE3B-202ENST00000342494 NEMFO60524 1076 aa17.12■□□□□ 0.33
UBE3B-202ENST00000342494 UBE4AQ14139 1066 aa17.12■□□□□ 0.33
UBE3B-202ENST00000342494 ZNF518AQ6AHZ1 1483 aa17.12■□□□□ 0.33
UBE3B-202ENST00000342494 SMC1AQ14683 1233 aaKnown RBP17.12■□□□□ 0.33
UBE3B-202ENST00000342494 JAG2Q9Y219 1238 aa17.12■□□□□ 0.33
UBE3B-202ENST00000342494 SSX2IPQ9Y2D8 614 aa17.12■□□□□ 0.33
UBE3B-202ENST00000342494 CDCA7Q9BWT1 371 aaPredicted RBP17.12■□□□□ 0.33
UBE3B-202ENST00000342494 RTL9Q8NET4 1388 aa17.12■□□□□ 0.33
UBE3B-202ENST00000342494 ASIC1P78348 528 aa17.12■□□□□ 0.33
UBE3B-202ENST00000342494 ANKRD44Q8N8A2 993 aa17.12■□□□□ 0.33
UBE3B-202ENST00000342494 IFI16Q16666 785 aaKnown RBP17.12■□□□□ 0.33
UBE3B-202ENST00000342494 CWF19L2Q2TBE0 894 aaKnown RBP17.12■□□□□ 0.33
UBE3B-202ENST00000342494 Q6ZUG5 572 aa17.12■□□□□ 0.33
UBE3B-202ENST00000342494 HOMER2Q9NSB8 354 aa17.12■□□□□ 0.33
UBE3B-202ENST00000342494 POLKQ9UBT6 870 aa17.12■□□□□ 0.33
UBE3B-202ENST00000342494 KCNA6P17658 529 aa17.11■□□□□ 0.33
UBE3B-202ENST00000342494 CALML3P27482 149 aa17.11■□□□□ 0.33
UBE3B-202ENST00000342494 KCNG4Q8TDN1 519 aa17.11■□□□□ 0.33
UBE3B-202ENST00000342494 MAP3K5Q99683 1374 aa17.11■□□□□ 0.33
UBE3B-202ENST00000342494 GOLGA6L10A0A0M3HER8 536 aa17.11■□□□□ 0.33
UBE3B-202ENST00000342494 FSD2A1L4K1 749 aa17.11■□□□□ 0.33
UBE3B-202ENST00000342494 RNF113AO15541 343 aaKnown RBP17.11■□□□□ 0.33
UBE3B-202ENST00000342494 LRRC45Q96CN5 670 aa17.11■□□□□ 0.33
UBE3B-202ENST00000342494 UBE2HP62256 183 aa17.11■□□□□ 0.33
UBE3B-202ENST00000342494 NUCB1Q02818 461 aa17.11■□□□□ 0.33
UBE3B-202ENST00000342494 TTC6Q86TZ1 520 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms