RNA–Protein interactions for RNA: ENST00000341948.6

PCDHB13-201, Transcript of protocadherin beta 13, humanhuman

APPRIS P1 BASIC

Gene PCDHB13, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13-201ENST00000341948 CNNM2Q9H8M5 875 aa17.45■□□□□ 0.38
PCDHB13-201ENST00000341948 MCM9Q9NXL9 1143 aa17.45■□□□□ 0.38
PCDHB13-201ENST00000341948 IL27Q8NEV9 243 aa17.45■□□□□ 0.38
PCDHB13-201ENST00000341948 IL17REQ8NFR9 667 aa17.45■□□□□ 0.38
PCDHB13-201ENST00000341948 NF2P35240 595 aa17.45■□□□□ 0.38
PCDHB13-201ENST00000341948 H0YIN7 160 aa17.45■□□□□ 0.38
PCDHB13-201ENST00000341948 RNF113AO15541 343 aaKnown RBP17.45■□□□□ 0.38
PCDHB13-201ENST00000341948 ESYT1Q9BSJ8 1104 aa17.45■□□□□ 0.38
PCDHB13-201ENST00000341948 DEF6Q9H4E7 631 aa17.45■□□□□ 0.38
PCDHB13-201ENST00000341948 PREX2Q70Z35 1606 aa17.45■□□□□ 0.38
PCDHB13-201ENST00000341948 NMIQ13287 307 aaPredicted RBP17.44■□□□□ 0.38
PCDHB13-201ENST00000341948 IFIT1BQ5T764 474 aaKnown RBP17.44■□□□□ 0.38
PCDHB13-201ENST00000341948 ERCC4Q92889 916 aaPredicted RBP17.44■□□□□ 0.38
PCDHB13-201ENST00000341948 MAP7D2Q96T17 732 aa17.44■□□□□ 0.38
PCDHB13-201ENST00000341948 ESPNB1AK53 854 aa17.44■□□□□ 0.38
PCDHB13-201ENST00000341948 TMTC2Q8N394 836 aa17.44■□□□□ 0.38
PCDHB13-201ENST00000341948 STX6O43752 255 aa17.44■□□□□ 0.38
PCDHB13-201ENST00000341948 GJB2P29033 226 aa17.44■□□□□ 0.38
PCDHB13-201ENST00000341948 CCDC178Q5BJE1 867 aa17.44■□□□□ 0.38
PCDHB13-201ENST00000341948 KLHDC4Q8TBB5 520 aa17.44■□□□□ 0.38
PCDHB13-201ENST00000341948 PLXNC1O60486 1568 aa17.43■□□□□ 0.38
PCDHB13-201ENST00000341948 ZBTB43O43298 467 aa17.43■□□□□ 0.38
PCDHB13-201ENST00000341948 TRMT1LQ7Z2T5 733 aaKnown RBP17.43■□□□□ 0.38
PCDHB13-201ENST00000341948 A0A1B0GUL7 405 aa17.43■□□□□ 0.38
PCDHB13-201ENST00000341948 ZNF594Q96JF6 807 aaPredicted RBP17.43■□□□□ 0.38
PCDHB13-201ENST00000341948 ANO10Q9NW15 660 aa17.43■□□□□ 0.38
PCDHB13-201ENST00000341948 GJA3Q9Y6H8 435 aa17.43■□□□□ 0.38
PCDHB13-201ENST00000341948 KCNQ3O43525 872 aa17.43■□□□□ 0.38
PCDHB13-201ENST00000341948 CARD10Q9BWT7 1032 aa17.43■□□□□ 0.38
PCDHB13-201ENST00000341948 SPATA31E1Q6ZUB1 1445 aa17.43■□□□□ 0.38
PCDHB13-201ENST00000341948 ZBTB7BO15156 539 aaPredicted RBP17.42■□□□□ 0.38
PCDHB13-201ENST00000341948 GNAT2P19087 354 aa17.42■□□□□ 0.38
PCDHB13-201ENST00000341948 HIBADHP31937 336 aaKnown RBP17.42■□□□□ 0.38
PCDHB13-201ENST00000341948 PPP4R3BQ5MIZ7 849 aa17.42■□□□□ 0.38
PCDHB13-201ENST00000341948 GGA1Q9UJY5 639 aa17.42■□□□□ 0.38
PCDHB13-201ENST00000341948 DENND2AQ9ULE3 1009 aa17.42■□□□□ 0.38
PCDHB13-201ENST00000341948 BAG4O95429 457 aaKnown RBP17.42■□□□□ 0.38
PCDHB13-201ENST00000341948 CCDC112Q8NEF3 446 aa17.42■□□□□ 0.38
PCDHB13-201ENST00000341948 GCC2Q8IWJ2 1684 aa17.42■□□□□ 0.38
PCDHB13-201ENST00000341948 LMOD1P29536 600 aaPredicted RBP17.42■□□□□ 0.38
PCDHB13-201ENST00000341948 GCKRQ14397 625 aa17.42■□□□□ 0.38
PCDHB13-201ENST00000341948 CFAP100Q494V2 611 aa17.42■□□□□ 0.38
PCDHB13-201ENST00000341948 PPP4R3AQ6IN85 833 aa17.42■□□□□ 0.38
PCDHB13-201ENST00000341948 GIGYF1O75420 1035 aaPredicted RBP17.41■□□□□ 0.38
PCDHB13-201ENST00000341948 TXLNBQ8N3L3 684 aa17.41■□□□□ 0.38
PCDHB13-201ENST00000341948 PAF1Q8N7H5 531 aa17.41■□□□□ 0.38
PCDHB13-201ENST00000341948 PUM3Q15397 648 aaKnown RBP17.41■□□□□ 0.38
PCDHB13-201ENST00000341948 DPP8Q6V1X1 898 aaPredicted RBP17.41■□□□□ 0.38
PCDHB13-201ENST00000341948 TFIP11Q9UBB9 837 aaKnown RBP17.41■□□□□ 0.38
PCDHB13-201ENST00000341948 PRR36Q9H6K5 1346 aa17.4■□□□□ 0.38
PCDHB13-201ENST00000341948 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.4■□□□□ 0.38
PCDHB13-201ENST00000341948 MYO6Q9UM54 1294 aa17.4■□□□□ 0.38
PCDHB13-201ENST00000341948 CTAGE5O15320 804 aa17.4■□□□□ 0.38
PCDHB13-201ENST00000341948 NBPF7P0C2Y1 421 aaPredicted RBP17.4■□□□□ 0.38
PCDHB13-201ENST00000341948 ANAPC15P60006 121 aa17.4■□□□□ 0.38
PCDHB13-201ENST00000341948 UBA5Q9GZZ9 404 aa17.4■□□□□ 0.38
PCDHB13-201ENST00000341948 SETQ01105 290 aaPredicted RBP17.4■□□□□ 0.38
PCDHB13-201ENST00000341948 NOM1Q5C9Z4 860 aaKnown RBP17.4■□□□□ 0.38
PCDHB13-201ENST00000341948 DDX19AQ9NUU7 478 aaKnown RBP17.4■□□□□ 0.38
PCDHB13-201ENST00000341948 PRDM15P57071 1507 aaPredicted RBP17.39■□□□□ 0.38
PCDHB13-201ENST00000341948 VSIG10Q8N0Z9 540 aa17.39■□□□□ 0.37
PCDHB13-201ENST00000341948 LARGE2Q8N3Y3 721 aa17.39■□□□□ 0.37
PCDHB13-201ENST00000341948 NECAB1Q8N987 351 aa17.39■□□□□ 0.37
PCDHB13-201ENST00000341948 SUCLG2Q96I99 432 aa17.39■□□□□ 0.37
PCDHB13-201ENST00000341948 TMX3Q96JJ7 454 aa17.39■□□□□ 0.37
PCDHB13-201ENST00000341948 GDPD2Q9HCC8 539 aa17.39■□□□□ 0.37
PCDHB13-201ENST00000341948 TAF5LO75529 589 aa17.39■□□□□ 0.37
PCDHB13-201ENST00000341948 GNAQP50148 359 aa17.39■□□□□ 0.37
PCDHB13-201ENST00000341948 TCIRG1Q13488 830 aa17.39■□□□□ 0.37
PCDHB13-201ENST00000341948 RTN1Q16799 776 aa17.39■□□□□ 0.37
PCDHB13-201ENST00000341948 SMC5Q8IY18 1101 aa17.39■□□□□ 0.37
PCDHB13-201ENST00000341948 TCP11L1Q9NUJ3 509 aa17.39■□□□□ 0.37
PCDHB13-201ENST00000341948 KDM6BO15054 1643 aa17.39■□□□□ 0.37
PCDHB13-201ENST00000341948 RDXP35241 583 aaKnown RBP17.39■□□□□ 0.37
PCDHB13-201ENST00000341948 ZNF772Q68DY9 489 aaPredicted RBP17.39■□□□□ 0.37
PCDHB13-201ENST00000341948 MSL1Q68DK7 614 aa17.39■□□□□ 0.37
PCDHB13-201ENST00000341948 KRI1Q8N9T8 703 aaKnown RBP17.39■□□□□ 0.37
PCDHB13-201ENST00000341948 DBNDD2Q9BQY9 259 aa17.39■□□□□ 0.37
PCDHB13-201ENST00000341948 TRAF1Q13077 416 aa17.38■□□□□ 0.37
PCDHB13-201ENST00000341948 KLHL10Q6JEL2 608 aa17.38■□□□□ 0.37
PCDHB13-201ENST00000341948 FAM177A1Q8N128 213 aaPredicted RBP17.38■□□□□ 0.37
PCDHB13-201ENST00000341948 PPP1R12BO60237 982 aaPredicted RBP17.38■□□□□ 0.37
PCDHB13-201ENST00000341948 RXRBP28702 533 aa17.38■□□□□ 0.37
PCDHB13-201ENST00000341948 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.38■□□□□ 0.37
PCDHB13-201ENST00000341948 SAMM50Q9Y512 469 aa17.38■□□□□ 0.37
PCDHB13-201ENST00000341948 FAM135BQ49AJ0 1406 aa17.38■□□□□ 0.37
PCDHB13-201ENST00000341948 LOC102724428A0A0B4J2F2 783 aa17.38■□□□□ 0.37
PCDHB13-201ENST00000341948 EIF5P55010 431 aaKnown RBP17.38■□□□□ 0.37
PCDHB13-201ENST00000341948 SIK1P57059 783 aa17.38■□□□□ 0.37
PCDHB13-201ENST00000341948 TNNI3KQ59H18 835 aa17.38■□□□□ 0.37
PCDHB13-201ENST00000341948 FAM182BQ5T319 152 aa17.38■□□□□ 0.37
PCDHB13-201ENST00000341948 ZSCAN30Q86W11 494 aa17.38■□□□□ 0.37
PCDHB13-201ENST00000341948 FPGT-TNNI3KV9GXZ4 949 aa17.38■□□□□ 0.37
PCDHB13-201ENST00000341948 FSIP1Q8NA03 581 aa17.38■□□□□ 0.37
PCDHB13-201ENST00000341948 PRC1O43663 620 aa17.37■□□□□ 0.37
PCDHB13-201ENST00000341948 FLAD1Q8NFF5 587 aa17.37■□□□□ 0.37
PCDHB13-201ENST00000341948 ABCC3O15438 1527 aa17.37■□□□□ 0.37
PCDHB13-201ENST00000341948 TNNI2P48788 182 aa17.37■□□□□ 0.37
PCDHB13-201ENST00000341948 TTC6Q86TZ1 520 aa17.37■□□□□ 0.37
PCDHB13-201ENST00000341948 TEX11Q8IYF3 940 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms