RNA–Protein interactions for RNA: ENST00000341807.8

COL22A1-202, Transcript of collagen type XXII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL22A1, Length 3,584 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1-202ENST00000341807 USP42Q9H9J4 1324 aaKnown RBP15.5■□□□□ 0.07
COL22A1-202ENST00000341807 CPLX1O14810 134 aa15.5■□□□□ 0.07
COL22A1-202ENST00000341807 GNL2Q13823 731 aaKnown RBP15.5■□□□□ 0.07
COL22A1-202ENST00000341807 ISM2Q6H9L7 571 aa15.5■□□□□ 0.07
COL22A1-202ENST00000341807 GTF3C6Q969F1 213 aa15.5■□□□□ 0.07
COL22A1-202ENST00000341807 ZNF594Q96JF6 807 aaPredicted RBP15.5■□□□□ 0.07
COL22A1-202ENST00000341807 DIP2AQ14689 1571 aa15.5■□□□□ 0.07
COL22A1-202ENST00000341807 SETD1AO15047 1707 aaKnown RBP15.49■□□□□ 0.07
COL22A1-202ENST00000341807 PTPDC1A2A3K4 754 aa15.49■□□□□ 0.07
COL22A1-202ENST00000341807 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.49■□□□□ 0.07
COL22A1-202ENST00000341807 V9GYY5 206 aaPredicted RBP15.49■□□□□ 0.07
COL22A1-202ENST00000341807 ZNF75DP51815 510 aa15.49■□□□□ 0.07
COL22A1-202ENST00000341807 CCDC94Q9BW85 323 aaPredicted RBP15.49■□□□□ 0.07
COL22A1-202ENST00000341807 IFIT1P09914 478 aaKnown RBP15.49■□□□□ 0.07
COL22A1-202ENST00000341807 STK38Q15208 465 aa15.49■□□□□ 0.07
COL22A1-202ENST00000341807 CCDC112Q8NEF3 446 aa15.49■□□□□ 0.07
COL22A1-202ENST00000341807 SNRPA1P09661 255 aaKnown RBP15.48■□□□□ 0.07
COL22A1-202ENST00000341807 SCRN1Q12765 414 aa15.48■□□□□ 0.07
COL22A1-202ENST00000341807 PXDNLA1KZ92 1463 aa15.48■□□□□ 0.07
COL22A1-202ENST00000341807 SMC2O95347 1197 aa15.48■□□□□ 0.07
COL22A1-202ENST00000341807 APPP05067 770 aa15.48■□□□□ 0.07
COL22A1-202ENST00000341807 STK11IPQ8N1F8 1099 aa15.48■□□□□ 0.07
COL22A1-202ENST00000341807 U2AF2P26368 475 aaKnown RBP eCLIP15.47■□□□□ 0.07
COL22A1-202ENST00000341807 TTLL5Q6EMB2 1281 aa15.47■□□□□ 0.07
COL22A1-202ENST00000341807 ATP5JP18859 108 aa15.47■□□□□ 0.07
COL22A1-202ENST00000341807 PTPN12Q05209 780 aaKnown RBP15.47■□□□□ 0.07
COL22A1-202ENST00000341807 ARID5BQ14865 1188 aa15.47■□□□□ 0.07
COL22A1-202ENST00000341807 IL17RAQ96F46 866 aa15.47■□□□□ 0.07
COL22A1-202ENST00000341807 SLC52A2Q9HAB3 445 aa15.47■□□□□ 0.07
COL22A1-202ENST00000341807 ZNF396Q96N95 335 aaPredicted RBP15.47■□□□□ 0.07
COL22A1-202ENST00000341807 USP28Q96RU2 1077 aa15.46■□□□□ 0.07
COL22A1-202ENST00000341807 DHX32Q7L7V1 743 aaKnown RBP15.46■□□□□ 0.07
COL22A1-202ENST00000341807 IFNL2Q8IZJ0 200 aa15.46■□□□□ 0.07
COL22A1-202ENST00000341807 PAG1Q9NWQ8 432 aa15.46■□□□□ 0.07
COL22A1-202ENST00000341807 A0A0G2JLW4 131 aa15.46■□□□□ 0.06
COL22A1-202ENST00000341807 PDIA4P13667 645 aaKnown RBP15.46■□□□□ 0.06
COL22A1-202ENST00000341807 ZSCAN25Q6NSZ9 544 aa15.46■□□□□ 0.06
COL22A1-202ENST00000341807 AOPEPQ8N6M6 819 aa15.46■□□□□ 0.06
COL22A1-202ENST00000341807 SYTL4Q96C24 671 aaPredicted RBP15.46■□□□□ 0.06
COL22A1-202ENST00000341807 ZSCAN16Q9H4T2 348 aaPredicted RBP15.46■□□□□ 0.06
COL22A1-202ENST00000341807 A0A1B0GVL5 298 aa15.45■□□□□ 0.06
COL22A1-202ENST00000341807 NAA30Q147X3 362 aaPredicted RBP15.45■□□□□ 0.06
COL22A1-202ENST00000341807 C11orf57Q6ZUT1 292 aaPredicted RBP15.45■□□□□ 0.06
COL22A1-202ENST00000341807 ZNF710Q8N1W2 664 aa15.45■□□□□ 0.06
COL22A1-202ENST00000341807 CACTINQ8WUQ7 758 aaKnown RBP15.45■□□□□ 0.06
COL22A1-202ENST00000341807 GPHNQ9NQX3 736 aaPredicted RBP15.45■□□□□ 0.06
COL22A1-202ENST00000341807 PDIA6Q15084 440 aa15.45■□□□□ 0.06
COL22A1-202ENST00000341807 SYNE3Q6ZMZ3 975 aa15.45■□□□□ 0.06
COL22A1-202ENST00000341807 RALYLQ86SE5 291 aaKnown RBP15.45■□□□□ 0.06
COL22A1-202ENST00000341807 ELP1O95163 1332 aa15.44■□□□□ 0.06
COL22A1-202ENST00000341807 SKILP12757 684 aa15.44■□□□□ 0.06
COL22A1-202ENST00000341807 RESTQ13127 1097 aa15.44■□□□□ 0.06
COL22A1-202ENST00000341807 CEP57L1Q8IYX8 460 aa15.44■□□□□ 0.06
COL22A1-202ENST00000341807 SPTLC3Q9NUV7 552 aa15.44■□□□□ 0.06
COL22A1-202ENST00000341807 CEP126Q9P2H0 1117 aa15.44■□□□□ 0.06
COL22A1-202ENST00000341807 STX1AQ16623 288 aa15.44■□□□□ 0.06
COL22A1-202ENST00000341807 TTC39AQ5SRH9 613 aa15.44■□□□□ 0.06
COL22A1-202ENST00000341807 KBTBD3Q8NAB2 608 aa15.44■□□□□ 0.06
COL22A1-202ENST00000341807 COPRSQ9NQ92 184 aa15.44■□□□□ 0.06
COL22A1-202ENST00000341807 PXDNQ92626 1479 aa15.43■□□□□ 0.06
COL22A1-202ENST00000341807 STOX1Q6ZVD7 989 aa15.43■□□□□ 0.06
COL22A1-202ENST00000341807 TOMM22Q9NS69 142 aa15.43■□□□□ 0.06
COL22A1-202ENST00000341807 A1BGP04217 495 aa15.43■□□□□ 0.06
COL22A1-202ENST00000341807 CCDC144BQ3MJ40 725 aa15.43■□□□□ 0.06
COL22A1-202ENST00000341807 LRRC24Q50LG9 513 aa15.43■□□□□ 0.06
COL22A1-202ENST00000341807 TTLL7Q6ZT98 887 aa15.43■□□□□ 0.06
COL22A1-202ENST00000341807 CCDC144CPQ8IYA2 1237 aa15.43■□□□□ 0.06
COL22A1-202ENST00000341807 KCNB2Q92953 911 aa15.43■□□□□ 0.06
COL22A1-202ENST00000341807 PTPN14Q15678 1187 aa15.42■□□□□ 0.06
COL22A1-202ENST00000341807 C8orf76Q96K31 380 aa15.42■□□□□ 0.06
COL22A1-202ENST00000341807 ANO10Q9NW15 660 aa15.42■□□□□ 0.06
COL22A1-202ENST00000341807 ANKARQ7Z5J8 1434 aa15.42■□□□□ 0.06
COL22A1-202ENST00000341807 GOLGA8BA8MQT2 603 aa15.42■□□□□ 0.06
COL22A1-202ENST00000341807 PHKG2P15735 406 aa15.42■□□□□ 0.06
COL22A1-202ENST00000341807 GJB4Q9NTQ9 266 aa15.42■□□□□ 0.06
COL22A1-202ENST00000341807 ATF3P18847 181 aa15.42■□□□□ 0.06
COL22A1-202ENST00000341807 CEP135Q66GS9 1140 aa15.42■□□□□ 0.06
COL22A1-202ENST00000341807 NSUN7Q8NE18 718 aaKnown RBP15.42■□□□□ 0.06
COL22A1-202ENST00000341807 HAUS7Q99871 368 aa15.42■□□□□ 0.06
COL22A1-202ENST00000341807 CCDC69A6NI79 296 aa15.41■□□□□ 0.06
COL22A1-202ENST00000341807 HMGB1P09429 215 aaKnown RBP15.41■□□□□ 0.06
COL22A1-202ENST00000341807 RXRAP19793 462 aa15.41■□□□□ 0.06
COL22A1-202ENST00000341807 ATP2B3Q16720 1220 aa15.41■□□□□ 0.06
COL22A1-202ENST00000341807 CCDC57Q2TAC2 916 aa15.41■□□□□ 0.06
COL22A1-202ENST00000341807 HOMER1Q86YM7 354 aa15.41■□□□□ 0.06
COL22A1-202ENST00000341807 ORC3Q9UBD5 711 aaPredicted RBP15.41■□□□□ 0.06
COL22A1-202ENST00000341807 RGPD8O14715 1765 aaPredicted RBP15.41■□□□□ 0.06
COL22A1-202ENST00000341807 KLF18A0A0U1RQI7 1052 aa15.41■□□□□ 0.06
COL22A1-202ENST00000341807 E7EWF7 191 aa15.41■□□□□ 0.06
COL22A1-202ENST00000341807 NAT10Q9H0A0 1025 aaKnown RBP15.41■□□□□ 0.06
COL22A1-202ENST00000341807 CWC25Q9NXE8 425 aaPredicted RBP15.41■□□□□ 0.06
COL22A1-202ENST00000341807 NRDCO43847 1150 aa15.41■□□□□ 0.06
COL22A1-202ENST00000341807 MARCKSP29966 332 aaPredicted RBP15.41■□□□□ 0.06
COL22A1-202ENST00000341807 CCDC158Q5M9N0 1113 aa15.41■□□□□ 0.06
COL22A1-202ENST00000341807 PUS3Q9BZE2 481 aaKnown RBP15.41■□□□□ 0.06
COL22A1-202ENST00000341807 MED23Q9ULK4 1368 aa15.4■□□□□ 0.06
COL22A1-202ENST00000341807 A0A1B0GUL7 405 aa15.4■□□□□ 0.06
COL22A1-202ENST00000341807 ATP2B1P20020 1258 aa15.4■□□□□ 0.06
COL22A1-202ENST00000341807 ZNF771Q7L3S4 317 aaPredicted RBP15.4■□□□□ 0.06
COL22A1-202ENST00000341807 TDRD7Q8NHU6 1098 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms