RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 E9PSI1 815 aa25.64■■□□□ 1.7
SYNE2-201ENST00000341472 ATP2B4P23634 1241 aa25.64■■□□□ 1.7
SYNE2-201ENST00000341472 CASP7P55210 303 aa25.64■■□□□ 1.7
SYNE2-201ENST00000341472 BEND3Q5T5X7 828 aa25.64■■□□□ 1.7
SYNE2-201ENST00000341472 CNOT7Q9UIV1 285 aaKnown RBP25.64■■□□□ 1.7
SYNE2-201ENST00000341472 SCN4AP35499 1836 aa25.64■■□□□ 1.7
SYNE2-201ENST00000341472 LAMB2P55268 1798 aa25.64■■□□□ 1.69
SYNE2-201ENST00000341472 TMEM88BA6NKF7 163 aa25.63■■□□□ 1.69
SYNE2-201ENST00000341472 H7C1D1 291 aa25.63■■□□□ 1.69
SYNE2-201ENST00000341472 CCER2I3L3R5 266 aa25.63■■□□□ 1.69
SYNE2-201ENST00000341472 ECE2O60344 883 aa25.63■■□□□ 1.69
SYNE2-201ENST00000341472 XDHP47989 1333 aa25.63■■□□□ 1.69
SYNE2-201ENST00000341472 RTL9Q8NET4 1388 aa25.62■■□□□ 1.69
SYNE2-201ENST00000341472 PSMD14O00487 310 aa25.62■■□□□ 1.69
SYNE2-201ENST00000341472 CSF1RP07333 972 aa25.62■■□□□ 1.69
SYNE2-201ENST00000341472 DPF2Q92785 391 aa25.62■■□□□ 1.69
SYNE2-201ENST00000341472 KCNQ5Q9NR82 932 aa25.62■■□□□ 1.69
SYNE2-201ENST00000341472 MINPP1Q9UNW1 487 aa25.62■■□□□ 1.69
SYNE2-201ENST00000341472 ZBTB12Q9Y330 459 aaPredicted RBP25.62■■□□□ 1.69
SYNE2-201ENST00000341472 IGHMBP2P38935 993 aaKnown RBP25.61■■□□□ 1.69
SYNE2-201ENST00000341472 MKRN1Q9UHC7 482 aaKnown RBP25.61■■□□□ 1.69
SYNE2-201ENST00000341472 TAF1P21675 1872 aa25.6■■□□□ 1.69
SYNE2-201ENST00000341472 ITGA6P23229 1130 aa25.59■■□□□ 1.69
SYNE2-201ENST00000341472 SLFN5Q08AF3 891 aa25.59■■□□□ 1.69
SYNE2-201ENST00000341472 SLC4A10Q6U841 1118 aa25.59■■□□□ 1.69
SYNE2-201ENST00000341472 COL4A1P02462 1669 aa25.58■■□□□ 1.69
SYNE2-201ENST00000341472 DUOX1Q9NRD9 1551 aa25.58■■□□□ 1.69
SYNE2-201ENST00000341472 RPS12P25398 132 aaKnown RBP25.58■■□□□ 1.69
SYNE2-201ENST00000341472 MICALL2Q8IY33 904 aa25.58■■□□□ 1.69
SYNE2-201ENST00000341472 ZC3H15Q8WU90 426 aaKnown RBP25.58■■□□□ 1.69
SYNE2-201ENST00000341472 MPHOSPH8Q99549 860 aa25.58■■□□□ 1.69
SYNE2-201ENST00000341472 HIRAP54198 1017 aaPredicted RBP25.57■■□□□ 1.68
SYNE2-201ENST00000341472 FAM161AQ3B820 660 aa25.57■■□□□ 1.68
SYNE2-201ENST00000341472 PGAP2Q9UHJ9 254 aa25.57■■□□□ 1.68
SYNE2-201ENST00000341472 SHTN1A0MZ66 631 aa25.56■■□□□ 1.68
SYNE2-201ENST00000341472 ANKRD18BA2A2Z9 1011 aa25.56■■□□□ 1.68
SYNE2-201ENST00000341472 ALDH1L1O75891 902 aa25.56■■□□□ 1.68
SYNE2-201ENST00000341472 VIL1P09327 827 aaKnown RBP25.56■■□□□ 1.68
SYNE2-201ENST00000341472 MRPL50Q8N5N7 158 aaKnown RBP25.56■■□□□ 1.68
SYNE2-201ENST00000341472 C9orf78Q9NZ63 289 aaPredicted RBP25.56■■□□□ 1.68
SYNE2-201ENST00000341472 WTIPA6NIX2 430 aaPredicted RBP25.55■■□□□ 1.68
SYNE2-201ENST00000341472 GRM8O00222 908 aa25.55■■□□□ 1.68
SYNE2-201ENST00000341472 CCT4P50991 539 aaKnown RBP25.55■■□□□ 1.68
SYNE2-201ENST00000341472 FOXO4P98177 505 aa25.55■■□□□ 1.68
SYNE2-201ENST00000341472 TRPM4Q8TD43 1214 aa25.55■■□□□ 1.68
SYNE2-201ENST00000341472 SRCIN1Q9C0H9 1055 aa25.55■■□□□ 1.68
SYNE2-201ENST00000341472 ANKRD2Q9GZV1 360 aa25.55■■□□□ 1.68
SYNE2-201ENST00000341472 LEMD3Q9Y2U8 911 aa25.55■■□□□ 1.68
SYNE2-201ENST00000341472 IFIT5Q13325 482 aaKnown RBP25.54■■□□□ 1.68
SYNE2-201ENST00000341472 PODNQ7Z5L7 613 aa25.54■■□□□ 1.68
SYNE2-201ENST00000341472 CDCA7LQ96GN5 454 aa25.54■■□□□ 1.68
SYNE2-201ENST00000341472 TRAF5O00463 557 aa25.53■■□□□ 1.68
SYNE2-201ENST00000341472 FMR1Q06787 632 aaKnown RBP eCLIP25.53■■□□□ 1.68
SYNE2-201ENST00000341472 SAMD7Q7Z3H4 446 aa25.53■■□□□ 1.68
SYNE2-201ENST00000341472 CHMP3Q9Y3E7 222 aa25.53■■□□□ 1.68
SYNE2-201ENST00000341472 LRRC37AA6NMS7 1700 aa25.53■■□□□ 1.68
SYNE2-201ENST00000341472 LTBP1Q14766 1721 aa25.52■■□□□ 1.68
SYNE2-201ENST00000341472 DEFB115Q30KQ5 88 aa25.52■■□□□ 1.68
SYNE2-201ENST00000341472 TBC1D10BQ4KMP7 808 aaPredicted RBP25.52■■□□□ 1.68
SYNE2-201ENST00000341472 RBM26Q5T8P6 1007 aaKnown RBP25.52■■□□□ 1.68
SYNE2-201ENST00000341472 LMBR1LQ6UX01 489 aa25.52■■□□□ 1.68
SYNE2-201ENST00000341472 SSH1Q8WYL5 1049 aa25.52■■□□□ 1.68
SYNE2-201ENST00000341472 ABT1Q9ULW3 272 aaKnown RBP25.52■■□□□ 1.68
SYNE2-201ENST00000341472 CNTNAP1P78357 1384 aa25.52■■□□□ 1.68
SYNE2-201ENST00000341472 CDC37L1Q7L3B6 337 aa25.51■■□□□ 1.67
SYNE2-201ENST00000341472 GLIS2Q9BZE0 524 aaPredicted RBP25.51■■□□□ 1.67
SYNE2-201ENST00000341472 USP17L3A6NCW0 530 aa25.5■■□□□ 1.67
SYNE2-201ENST00000341472 USP17L4A6NCW7 530 aa25.5■■□□□ 1.67
SYNE2-201ENST00000341472 VEGFBP49765 207 aa25.5■■□□□ 1.67
SYNE2-201ENST00000341472 EPHA10Q5JZY3 1008 aa25.5■■□□□ 1.67
SYNE2-201ENST00000341472 CST9Q5W186 159 aa25.5■■□□□ 1.67
SYNE2-201ENST00000341472 RSBN1LQ6PCB5 846 aaPredicted RBP25.5■■□□□ 1.67
SYNE2-201ENST00000341472 USP17L1Q7RTZ2 530 aa25.5■■□□□ 1.67
SYNE2-201ENST00000341472 ADAMTSL1Q8N6G6 1762 aa25.49■■□□□ 1.67
SYNE2-201ENST00000341472 ZNF804BA4D1E1 1349 aa25.49■■□□□ 1.67
SYNE2-201ENST00000341472 RASSF10A6NK89 507 aa25.49■■□□□ 1.67
SYNE2-201ENST00000341472 CCDC57Q2TAC2 916 aa25.49■■□□□ 1.67
SYNE2-201ENST00000341472 TRMT2AQ8IZ69 625 aaKnown RBP25.49■■□□□ 1.67
SYNE2-201ENST00000341472 AGBL3Q8NEM8 1001 aa25.49■■□□□ 1.67
SYNE2-201ENST00000341472 MED23Q9ULK4 1368 aa25.48■■□□□ 1.67
SYNE2-201ENST00000341472 PTPRCP08575 1304 aa25.48■■□□□ 1.67
SYNE2-201ENST00000341472 HSPA1AP0DMV8 641 aaKnown RBP25.48■■□□□ 1.67
SYNE2-201ENST00000341472 HSPA1BP0DMV9 641 aaKnown RBP25.48■■□□□ 1.67
SYNE2-201ENST00000341472 KCNJ4P48050 445 aa25.48■■□□□ 1.67
SYNE2-201ENST00000341472 CHRNDQ07001 517 aa25.48■■□□□ 1.67
SYNE2-201ENST00000341472 USP48Q86UV5 1035 aa25.48■■□□□ 1.67
SYNE2-201ENST00000341472 COA1Q9GZY4 146 aa25.48■■□□□ 1.67
SYNE2-201ENST00000341472 ALDH1L2Q3SY69 923 aa25.47■■□□□ 1.67
SYNE2-201ENST00000341472 TAF7LQ5H9L4 462 aa25.47■■□□□ 1.67
SYNE2-201ENST00000341472 CELF2O95319 508 aaKnown RBP25.46■■□□□ 1.67
SYNE2-201ENST00000341472 EGFRP00533 1210 aa25.46■■□□□ 1.67
SYNE2-201ENST00000341472 TXNRD3Q86VQ6 643 aa25.46■■□□□ 1.67
SYNE2-201ENST00000341472 USP17L8P0C7I0 530 aa25.45■■□□□ 1.66
SYNE2-201ENST00000341472 ZNF280AP59817 542 aaPredicted RBP25.45■■□□□ 1.66
SYNE2-201ENST00000341472 LDHAL6AQ6ZMR3 332 aa25.45■■□□□ 1.66
SYNE2-201ENST00000341472 DCPSQ96C86 337 aaKnown RBP25.45■■□□□ 1.66
SYNE2-201ENST00000341472 GMLQ99445 158 aa25.45■■□□□ 1.66
SYNE2-201ENST00000341472 NBPF7P0C2Y1 421 aaPredicted RBP25.44■■□□□ 1.66
SYNE2-201ENST00000341472 KIF4BQ2VIQ3 1234 aa25.44■■□□□ 1.66
SYNE2-201ENST00000341472 HELBQ8NG08 1087 aaPredicted RBP25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms