RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 ME3Q16798 604 aa12.12□□□□□ -0.47
RBFOX1-202ENST00000340209 TTLL11Q8NHH1 800 aa12.12□□□□□ -0.47
RBFOX1-202ENST00000340209 CNPY2Q9Y2B0 182 aa12.12□□□□□ -0.47
RBFOX1-202ENST00000340209 UBN2Q6ZU65 1347 aa12.12□□□□□ -0.47
RBFOX1-202ENST00000340209 GNPATO15228 680 aa12.12□□□□□ -0.47
RBFOX1-202ENST00000340209 PSMA5P28066 241 aa12.12□□□□□ -0.47
RBFOX1-202ENST00000340209 RRP12Q5JTH9 1297 aaKnown RBP12.12□□□□□ -0.47
RBFOX1-202ENST00000340209 KBTBD3Q8NAB2 608 aa12.12□□□□□ -0.47
RBFOX1-202ENST00000340209 TPCN1Q9ULQ1 816 aa12.12□□□□□ -0.47
RBFOX1-202ENST00000340209 PHKA1P46020 1223 aa12.11□□□□□ -0.47
RBFOX1-202ENST00000340209 L1TD1Q5T7N2 865 aaKnown RBP12.11□□□□□ -0.47
RBFOX1-202ENST00000340209 AEBP2Q6ZN18 517 aaPredicted RBP12.11□□□□□ -0.47
RBFOX1-202ENST00000340209 VPS37DQ86XT2 251 aa12.11□□□□□ -0.47
RBFOX1-202ENST00000340209 HAUS7Q99871 368 aa12.11□□□□□ -0.47
RBFOX1-202ENST00000340209 NSFL1CQ9UNZ2 370 aaKnown RBP12.11□□□□□ -0.47
RBFOX1-202ENST00000340209 PALLDQ8WX93 1383 aa12.11□□□□□ -0.47
RBFOX1-202ENST00000340209 SYCE3A1L190 88 aa12.11□□□□□ -0.47
RBFOX1-202ENST00000340209 LARP1BQ659C4 914 aaKnown RBP12.11□□□□□ -0.47
RBFOX1-202ENST00000340209 Q6ZUG5 572 aa12.11□□□□□ -0.47
RBFOX1-202ENST00000340209 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.11□□□□□ -0.47
RBFOX1-202ENST00000340209 DDIT3P35638 169 aa12.11□□□□□ -0.47
RBFOX1-202ENST00000340209 SLC9C2Q5TAH2 1124 aa12.11□□□□□ -0.47
RBFOX1-202ENST00000340209 UTP14AQ9BVJ6 771 aaKnown RBP12.11□□□□□ -0.47
RBFOX1-202ENST00000340209 NEK1Q96PY6 1258 aa12.11□□□□□ -0.47
RBFOX1-202ENST00000340209 NCOA5Q9HCD5 579 aaKnown RBP12.11□□□□□ -0.47
RBFOX1-202ENST00000340209 AKAP2Q9Y2D5 859 aa12.11□□□□□ -0.47
RBFOX1-202ENST00000340209 ROBO1Q9Y6N7 1651 aa12.1□□□□□ -0.47
RBFOX1-202ENST00000340209 SH3TC1Q8TE82 1336 aa12.1□□□□□ -0.47
RBFOX1-202ENST00000340209 M0R2C6 588 aa12.1□□□□□ -0.47
RBFOX1-202ENST00000340209 JAK2O60674 1132 aa12.1□□□□□ -0.47
RBFOX1-202ENST00000340209 XRCC6P12956 609 aaKnown RBP eCLIP12.1□□□□□ -0.47
RBFOX1-202ENST00000340209 SYT1P21579 422 aa12.1□□□□□ -0.47
RBFOX1-202ENST00000340209 GAS2L3Q86XJ1 694 aa12.1□□□□□ -0.47
RBFOX1-202ENST00000340209 FAM184AQ8NB25 1140 aa12.1□□□□□ -0.47
RBFOX1-202ENST00000340209 GPHNQ9NQX3 736 aaPredicted RBP12.1□□□□□ -0.47
RBFOX1-202ENST00000340209 WTIPA6NIX2 430 aaPredicted RBP12.1□□□□□ -0.47
RBFOX1-202ENST00000340209 H3BQV1 296 aa12.1□□□□□ -0.47
RBFOX1-202ENST00000340209 GADD45BO75293 160 aaPredicted RBP12.1□□□□□ -0.47
RBFOX1-202ENST00000340209 CYP21A2P08686 494 aa12.1□□□□□ -0.47
RBFOX1-202ENST00000340209 APOBRQ0VD83 1088 aa12.1□□□□□ -0.47
RBFOX1-202ENST00000340209 IFFO2Q5TF58 517 aa12.1□□□□□ -0.47
RBFOX1-202ENST00000340209 CCDC144CPQ8IYA2 1237 aa12.1□□□□□ -0.47
RBFOX1-202ENST00000340209 MAP4K1Q92918 833 aa12.1□□□□□ -0.47
RBFOX1-202ENST00000340209 TFIP11Q9UBB9 837 aaKnown RBP12.1□□□□□ -0.47
RBFOX1-202ENST00000340209 AFDNP55196 1824 aaKnown RBP12.1□□□□□ -0.47
RBFOX1-202ENST00000340209 RXRAP19793 462 aa12.1□□□□□ -0.47
RBFOX1-202ENST00000340209 MIGA1Q8NAN2 632 aa12.1□□□□□ -0.47
RBFOX1-202ENST00000340209 ZNF609O15014 1411 aa12.09□□□□□ -0.47
RBFOX1-202ENST00000340209 EP400Q96L91 3159 aa12.09□□□□□ -0.47
RBFOX1-202ENST00000340209 STX6O43752 255 aa12.09□□□□□ -0.47
RBFOX1-202ENST00000340209 IGHMBP2P38935 993 aaKnown RBP12.09□□□□□ -0.47
RBFOX1-202ENST00000340209 NECTIN1Q15223 517 aa12.09□□□□□ -0.47
RBFOX1-202ENST00000340209 PDE8AO60658 829 aa12.09□□□□□ -0.47
RBFOX1-202ENST00000340209 CHAF1AQ13111 956 aaPredicted RBP12.09□□□□□ -0.47
RBFOX1-202ENST00000340209 OSBP2Q969R2 916 aa12.09□□□□□ -0.47
RBFOX1-202ENST00000340209 RNF113AO15541 343 aaKnown RBP12.09□□□□□ -0.47
RBFOX1-202ENST00000340209 ANP32BQ92688 251 aaKnown RBP12.09□□□□□ -0.47
RBFOX1-202ENST00000340209 GRPEL1Q9HAV7 217 aa12.09□□□□□ -0.47
RBFOX1-202ENST00000340209 BCL9O00512 1426 aa12.09□□□□□ -0.47
RBFOX1-202ENST00000340209 WDR33Q9C0J8 1336 aaKnown RBP12.09□□□□□ -0.47
RBFOX1-202ENST00000340209 USP42Q9H9J4 1324 aaKnown RBP12.09□□□□□ -0.47
RBFOX1-202ENST00000340209 IL6STP40189 918 aaPredicted RBP12.08□□□□□ -0.48
RBFOX1-202ENST00000340209 DNM1Q05193 864 aaKnown RBP12.08□□□□□ -0.48
RBFOX1-202ENST00000340209 MAST3O60307 1309 aa12.08□□□□□ -0.48
RBFOX1-202ENST00000340209 BCAMP50895 628 aa12.08□□□□□ -0.48
RBFOX1-202ENST00000340209 SKOR2Q2VWA4 1001 aaPredicted RBP12.08□□□□□ -0.48
RBFOX1-202ENST00000340209 VSIG10Q8N0Z9 540 aa12.08□□□□□ -0.48
RBFOX1-202ENST00000340209 GOLGA6L4A6NEF3 574 aa12.08□□□□□ -0.48
RBFOX1-202ENST00000340209 USPL1Q5W0Q7 1092 aa12.08□□□□□ -0.48
RBFOX1-202ENST00000340209 RALYLQ86SE5 291 aaKnown RBP12.08□□□□□ -0.48
RBFOX1-202ENST00000340209 PUS7LQ9H0K6 701 aaKnown RBP12.08□□□□□ -0.48
RBFOX1-202ENST00000340209 CCNL1Q9UK58 526 aaPredicted RBP12.08□□□□□ -0.48
RBFOX1-202ENST00000340209 KCPQ6ZWJ8 1503 aa12.08□□□□□ -0.48
RBFOX1-202ENST00000340209 MCAMP43121 646 aa12.07□□□□□ -0.48
RBFOX1-202ENST00000340209 TRIM44Q96DX7 344 aaPredicted RBP12.07□□□□□ -0.48
RBFOX1-202ENST00000340209 LMBRD1Q9NUN5 540 aa12.07□□□□□ -0.48
RBFOX1-202ENST00000340209 LRP2BPQ9P2M1 347 aa12.07□□□□□ -0.48
RBFOX1-202ENST00000340209 ZPR1O75312 459 aa12.07□□□□□ -0.48
RBFOX1-202ENST00000340209 RPS6KB1P23443 525 aa12.07□□□□□ -0.48
RBFOX1-202ENST00000340209 ERFEQ4G0M1 354 aa12.07□□□□□ -0.48
RBFOX1-202ENST00000340209 INTS5Q6P9B9 1019 aaKnown RBP12.07□□□□□ -0.48
RBFOX1-202ENST00000340209 USP48Q86UV5 1035 aa12.07□□□□□ -0.48
RBFOX1-202ENST00000340209 FBXW7Q969H0 707 aa12.07□□□□□ -0.48
RBFOX1-202ENST00000340209 U3KPZ7 1027 aaPredicted RBP12.07□□□□□ -0.48
RBFOX1-202ENST00000340209 NBPF5PQ86XG9 351 aaPredicted RBP12.07□□□□□ -0.48
RBFOX1-202ENST00000340209 CCDC82Q8N4S0 544 aa12.07□□□□□ -0.48
RBFOX1-202ENST00000340209 TTC14Q96N46 770 aa12.07□□□□□ -0.48
RBFOX1-202ENST00000340209 SPATA31A5Q5VU36 1347 aa12.07□□□□□ -0.48
RBFOX1-202ENST00000340209 SPATA31A7Q8IWB4 1347 aa12.07□□□□□ -0.48
RBFOX1-202ENST00000340209 HSPD1P10809 573 aaKnown RBP12.06□□□□□ -0.48
RBFOX1-202ENST00000340209 LINC00116Q8NCU8 138 aa12.06□□□□□ -0.48
RBFOX1-202ENST00000340209 GPT2Q8TD30 523 aa12.06□□□□□ -0.48
RBFOX1-202ENST00000340209 AIDAQ96BJ3 306 aa12.06□□□□□ -0.48
RBFOX1-202ENST00000340209 ZSWIM6Q9HCJ5 1215 aa12.06□□□□□ -0.48
RBFOX1-202ENST00000340209 INCENPQ9NQS7 918 aa12.06□□□□□ -0.48
RBFOX1-202ENST00000340209 RAI14Q9P0K7 980 aa12.06□□□□□ -0.48
RBFOX1-202ENST00000340209 COL15A1P39059 1388 aa12.06□□□□□ -0.48
RBFOX1-202ENST00000340209 CCDC102BQ68D86 513 aa12.06□□□□□ -0.48
RBFOX1-202ENST00000340209 MAGEB6Q8N7X4 407 aa12.06□□□□□ -0.48
RBFOX1-202ENST00000340209 GPAA1O43292 621 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms