RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 ZNF652Q9Y2D9 606 aa20.65■□□□□ 0.9
ATAD3A-201ENST00000339113 MYH3P11055 1940 aa20.65■□□□□ 0.9
ATAD3A-201ENST00000339113 KBTBD3Q8NAB2 608 aa20.64■□□□□ 0.89
ATAD3A-201ENST00000339113 SEC62Q99442 399 aaKnown RBP20.64■□□□□ 0.89
ATAD3A-201ENST00000339113 SRP68Q9UHB9 627 aaKnown RBP20.64■□□□□ 0.89
ATAD3A-201ENST00000339113 GNPATO15228 680 aa20.64■□□□□ 0.89
ATAD3A-201ENST00000339113 PRPF40BQ6NWY9 871 aaKnown RBP20.64■□□□□ 0.89
ATAD3A-201ENST00000339113 MAP4K1Q92918 833 aa20.64■□□□□ 0.89
ATAD3A-201ENST00000339113 MED23Q9ULK4 1368 aa20.64■□□□□ 0.89
ATAD3A-201ENST00000339113 NECTIN1Q15223 517 aa20.63■□□□□ 0.89
ATAD3A-201ENST00000339113 BICDL1Q6ZP65 573 aa20.63■□□□□ 0.89
ATAD3A-201ENST00000339113 SCARF1Q14162 830 aa20.62■□□□□ 0.89
ATAD3A-201ENST00000339113 ATP2B3Q16720 1220 aa20.62■□□□□ 0.89
ATAD3A-201ENST00000339113 GORABQ5T7V8 394 aa20.62■□□□□ 0.89
ATAD3A-201ENST00000339113 USPL1Q5W0Q7 1092 aa20.62■□□□□ 0.89
ATAD3A-201ENST00000339113 TBC1D9BQ66K14 1250 aa20.62■□□□□ 0.89
ATAD3A-201ENST00000339113 RBM8AQ9Y5S9 174 aaKnown RBP20.62■□□□□ 0.89
ATAD3A-201ENST00000339113 HELBQ8NG08 1087 aaPredicted RBP20.62■□□□□ 0.89
ATAD3A-201ENST00000339113 EP400Q96L91 3159 aa20.62■□□□□ 0.89
ATAD3A-201ENST00000339113 ERFEQ4G0M1 354 aa20.61■□□□□ 0.89
ATAD3A-201ENST00000339113 CCDC158Q5M9N0 1113 aa20.61■□□□□ 0.89
ATAD3A-201ENST00000339113 CCDC129Q6ZRS4 1044 aa20.61■□□□□ 0.89
ATAD3A-201ENST00000339113 NOL8Q76FK4 1167 aaKnown RBP20.61■□□□□ 0.89
ATAD3A-201ENST00000339113 BCORQ6W2J9 1755 aa20.61■□□□□ 0.89
ATAD3A-201ENST00000339113 PDE8BO95263 885 aa20.61■□□□□ 0.89
ATAD3A-201ENST00000339113 ADCK5Q3MIX3 580 aa20.61■□□□□ 0.89
ATAD3A-201ENST00000339113 TTC39AQ5SRH9 613 aa20.61■□□□□ 0.89
ATAD3A-201ENST00000339113 KCNB2Q92953 911 aa20.61■□□□□ 0.89
ATAD3A-201ENST00000339113 NARFQ9UHQ1 456 aa20.61■□□□□ 0.89
ATAD3A-201ENST00000339113 GOLGA6L3A6NEY3 463 aa20.6■□□□□ 0.89
ATAD3A-201ENST00000339113 TAF5LO75529 589 aa20.6■□□□□ 0.89
ATAD3A-201ENST00000339113 C3orf67Q6ZVT6 689 aa20.6■□□□□ 0.89
ATAD3A-201ENST00000339113 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.6■□□□□ 0.89
ATAD3A-201ENST00000339113 TMX3Q96JJ7 454 aa20.6■□□□□ 0.89
ATAD3A-201ENST00000339113 SBF2Q86WG5 1849 aa20.6■□□□□ 0.89
ATAD3A-201ENST00000339113 DDX60Q8IY21 1712 aaKnown RBP20.6■□□□□ 0.89
ATAD3A-201ENST00000339113 CPA1P15085 419 aa20.6■□□□□ 0.89
ATAD3A-201ENST00000339113 FKBP4Q02790 459 aaKnown RBP eCLIP20.6■□□□□ 0.89
ATAD3A-201ENST00000339113 ZGPATQ8N5A5 531 aaKnown RBP20.6■□□□□ 0.89
ATAD3A-201ENST00000339113 LRRC4BQ9NT99 713 aa20.6■□□□□ 0.89
ATAD3A-201ENST00000339113 RFX7Q2KHR2 1363 aa20.59■□□□□ 0.89
ATAD3A-201ENST00000339113 SNAP23O00161 211 aa20.59■□□□□ 0.89
ATAD3A-201ENST00000339113 CREB3L3Q68CJ9 461 aa20.59■□□□□ 0.89
ATAD3A-201ENST00000339113 PI16Q6UXB8 463 aa20.59■□□□□ 0.89
ATAD3A-201ENST00000339113 BCL11BQ9C0K0 894 aaPredicted RBP20.59■□□□□ 0.89
ATAD3A-201ENST00000339113 CIZ1Q9ULV3 898 aaPredicted RBP20.59■□□□□ 0.89
ATAD3A-201ENST00000339113 CCDC152Q4G0S7 254 aa20.59■□□□□ 0.89
ATAD3A-201ENST00000339113 ARHGEF1Q92888 912 aaKnown RBP20.59■□□□□ 0.89
ATAD3A-201ENST00000339113 RTCBQ9Y3I0 505 aaKnown RBP20.59■□□□□ 0.89
ATAD3A-201ENST00000339113 XRCC6P12956 609 aaKnown RBP eCLIP20.58■□□□□ 0.89
ATAD3A-201ENST00000339113 KCNJ4P48050 445 aa20.58■□□□□ 0.89
ATAD3A-201ENST00000339113 TAF6LQ9Y6J9 622 aa20.58■□□□□ 0.89
ATAD3A-201ENST00000339113 COL9A3Q14050 684 aaPredicted RBP20.58■□□□□ 0.88
ATAD3A-201ENST00000339113 MCMDC2Q4G0Z9 681 aa20.58■□□□□ 0.88
ATAD3A-201ENST00000339113 TTC14Q96N46 770 aa20.58■□□□□ 0.88
ATAD3A-201ENST00000339113 ISY1Q9ULR0 285 aaKnown RBP20.58■□□□□ 0.88
ATAD3A-201ENST00000339113 SLC27A2O14975 620 aa20.57■□□□□ 0.88
ATAD3A-201ENST00000339113 ZAP70P43403 619 aa20.57■□□□□ 0.88
ATAD3A-201ENST00000339113 MCM2P49736 904 aa20.57■□□□□ 0.88
ATAD3A-201ENST00000339113 MPHOSPH8Q99549 860 aa20.57■□□□□ 0.88
ATAD3A-201ENST00000339113 CASTP20810 708 aaKnown RBP20.56■□□□□ 0.88
ATAD3A-201ENST00000339113 FGFR2P21802 821 aa20.56■□□□□ 0.88
ATAD3A-201ENST00000339113 LRP5O75197 1615 aa20.56■□□□□ 0.88
ATAD3A-201ENST00000339113 COL4A1P02462 1669 aa20.56■□□□□ 0.88
ATAD3A-201ENST00000339113 LY75O60449 1722 aa20.56■□□□□ 0.88
ATAD3A-201ENST00000339113 ZPR1O75312 459 aa20.56■□□□□ 0.88
ATAD3A-201ENST00000339113 RAB3GAP1Q15042 981 aa20.56■□□□□ 0.88
ATAD3A-201ENST00000339113 JAKMIP1Q96N16 626 aaKnown RBP20.56■□□□□ 0.88
ATAD3A-201ENST00000339113 RRAGDQ9NQL2 400 aaPredicted RBP20.56■□□□□ 0.88
ATAD3A-201ENST00000339113 MROH5Q6ZUA9 1318 aa20.56■□□□□ 0.88
ATAD3A-201ENST00000339113 MCAMP43121 646 aa20.55■□□□□ 0.88
ATAD3A-201ENST00000339113 ZMYM1Q5SVZ6 1142 aa20.55■□□□□ 0.88
ATAD3A-201ENST00000339113 FAM196AQ6ZSG2 479 aa20.55■□□□□ 0.88
ATAD3A-201ENST00000339113 TNPO1Q92973 898 aaKnown RBP20.55■□□□□ 0.88
ATAD3A-201ENST00000339113 LARP6Q9BRS8 491 aaKnown RBP20.55■□□□□ 0.88
ATAD3A-201ENST00000339113 RTL9Q8NET4 1388 aa20.55■□□□□ 0.88
ATAD3A-201ENST00000339113 PHF14O94880 888 aa20.55■□□□□ 0.88
ATAD3A-201ENST00000339113 HSP90B1P14625 803 aaKnown RBP20.55■□□□□ 0.88
ATAD3A-201ENST00000339113 RGL2O15211 777 aa20.54■□□□□ 0.88
ATAD3A-201ENST00000339113 RNF113AO15541 343 aaKnown RBP20.54■□□□□ 0.88
ATAD3A-201ENST00000339113 PHKA1P46020 1223 aa20.54■□□□□ 0.88
ATAD3A-201ENST00000339113 KRT27Q7Z3Y8 459 aa20.54■□□□□ 0.88
ATAD3A-201ENST00000339113 SCN7AQ01118 1682 aa20.54■□□□□ 0.88
ATAD3A-201ENST00000339113 DDX11L8A8MPP1 907 aa20.54■□□□□ 0.88
ATAD3A-201ENST00000339113 TRAK2O60296 914 aa20.54■□□□□ 0.88
ATAD3A-201ENST00000339113 AK2P54819 239 aa20.54■□□□□ 0.88
ATAD3A-201ENST00000339113 CUL4AQ13619 759 aa20.54■□□□□ 0.88
ATAD3A-201ENST00000339113 PUM3Q15397 648 aaKnown RBP20.54■□□□□ 0.88
ATAD3A-201ENST00000339113 CCDC24Q8N4L8 307 aa20.54■□□□□ 0.88
ATAD3A-201ENST00000339113 LPIN2Q92539 896 aa20.54■□□□□ 0.88
ATAD3A-201ENST00000339113 SETDB2Q96T68 719 aa20.54■□□□□ 0.88
ATAD3A-201ENST00000339113 ZSWIM6Q9HCJ5 1215 aa20.54■□□□□ 0.88
ATAD3A-201ENST00000339113 ABCC12Q96J65 1359 aa20.53■□□□□ 0.88
ATAD3A-201ENST00000339113 ZKSCAN1P17029 563 aaPredicted RBP20.53■□□□□ 0.88
ATAD3A-201ENST00000339113 IGHMBP2P38935 993 aaKnown RBP20.53■□□□□ 0.88
ATAD3A-201ENST00000339113 VPS53Q5VIR6 699 aa20.53■□□□□ 0.88
ATAD3A-201ENST00000339113 CCDC102BQ68D86 513 aa20.53■□□□□ 0.88
ATAD3A-201ENST00000339113 UBE2Q2Q8WVN8 375 aa20.53■□□□□ 0.88
ATAD3A-201ENST00000339113 HELLSQ9NRZ9 838 aa20.53■□□□□ 0.88
ATAD3A-201ENST00000339113 TAF1LQ8IZX4 1826 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms