RNA–Protein interactions for RNA: ENST00000333877.8

NELFA-201, Transcript of negative elongation factor complex member A, humanhuman

TSL 2

Gene NELFA, Length 2,228 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-201ENST00000333877 KCNB2Q92953 911 aa22.34■■□□□ 1.17
NELFA-201ENST00000333877 SEPT12Q8IYM1 358 aa22.33■■□□□ 1.17
NELFA-201ENST00000333877 CCNL1Q9UK58 526 aaPredicted RBP22.33■■□□□ 1.17
NELFA-201ENST00000333877 DDX60Q8IY21 1712 aaKnown RBP22.33■■□□□ 1.17
NELFA-201ENST00000333877 RC3H1Q5TC82 1133 aaKnown RBP22.33■■□□□ 1.16
NELFA-201ENST00000333877 SMIM5Q71RC9 77 aa22.33■■□□□ 1.16
NELFA-201ENST00000333877 CREB3L3Q68CJ9 461 aa22.32■■□□□ 1.16
NELFA-201ENST00000333877 ZGPATQ8N5A5 531 aaKnown RBP22.32■■□□□ 1.16
NELFA-201ENST00000333877 VGLL2Q8N8G2 317 aa22.32■■□□□ 1.16
NELFA-201ENST00000333877 TNPO1Q92973 898 aaKnown RBP22.32■■□□□ 1.16
NELFA-201ENST00000333877 TAF5LO75529 589 aa22.31■■□□□ 1.16
NELFA-201ENST00000333877 HSP90B1P14625 803 aaKnown RBP22.31■■□□□ 1.16
NELFA-201ENST00000333877 MCM4P33991 863 aa22.31■■□□□ 1.16
NELFA-201ENST00000333877 SEC62Q99442 399 aaKnown RBP22.31■■□□□ 1.16
NELFA-201ENST00000333877 CWC22Q9HCG8 908 aaKnown RBP22.31■■□□□ 1.16
NELFA-201ENST00000333877 SBF2Q86WG5 1849 aa22.31■■□□□ 1.16
NELFA-201ENST00000333877 ZKSCAN1P17029 563 aaPredicted RBP22.31■■□□□ 1.16
NELFA-201ENST00000333877 MCMDC2Q4G0Z9 681 aa22.31■■□□□ 1.16
NELFA-201ENST00000333877 SPEF2Q9C093 1822 aa22.31■■□□□ 1.16
NELFA-201ENST00000333877 RPS6KA4O75676 772 aa22.3■■□□□ 1.16
NELFA-201ENST00000333877 PDE8BO95263 885 aa22.3■■□□□ 1.16
NELFA-201ENST00000333877 CASTP20810 708 aaKnown RBP22.3■■□□□ 1.16
NELFA-201ENST00000333877 FKBP4Q02790 459 aaKnown RBP eCLIP22.3■■□□□ 1.16
NELFA-201ENST00000333877 CCDC152Q4G0S7 254 aa22.3■■□□□ 1.16
NELFA-201ENST00000333877 LAMB2P55268 1798 aa22.3■■□□□ 1.16
NELFA-201ENST00000333877 ADCK5Q3MIX3 580 aa22.3■■□□□ 1.16
NELFA-201ENST00000333877 CCDC129Q6ZRS4 1044 aa22.3■■□□□ 1.16
NELFA-201ENST00000333877 TICAM2Q86XR7 235 aa22.3■■□□□ 1.16
NELFA-201ENST00000333877 JAKMIP1Q96N16 626 aaKnown RBP22.3■■□□□ 1.16
NELFA-201ENST00000333877 TTC14Q96N46 770 aa22.3■■□□□ 1.16
NELFA-201ENST00000333877 SEC31BQ9NQW1 1179 aa22.3■■□□□ 1.16
NELFA-201ENST00000333877 LRP5O75197 1615 aa22.3■■□□□ 1.16
NELFA-201ENST00000333877 SLC27A2O14975 620 aa22.29■■□□□ 1.16
NELFA-201ENST00000333877 GNPATO15228 680 aa22.29■■□□□ 1.16
NELFA-201ENST00000333877 QTRT2Q9H974 415 aaKnown RBP22.29■■□□□ 1.16
NELFA-201ENST00000333877 CPA1P15085 419 aa22.29■■□□□ 1.16
NELFA-201ENST00000333877 TM6SF1Q9BZW5 370 aa22.29■■□□□ 1.16
NELFA-201ENST00000333877 MROH5Q6ZUA9 1318 aa22.28■■□□□ 1.16
NELFA-201ENST00000333877 SCN7AQ01118 1682 aa22.28■■□□□ 1.16
NELFA-201ENST00000333877 CUL4AQ13619 759 aa22.28■■□□□ 1.16
NELFA-201ENST00000333877 SCARF1Q14162 830 aa22.28■■□□□ 1.16
NELFA-201ENST00000333877 RNF20Q5VTR2 975 aa22.28■■□□□ 1.16
NELFA-201ENST00000333877 LY75O60449 1722 aa22.28■■□□□ 1.16
NELFA-201ENST00000333877 SSFA2P28290 1259 aa22.27■■□□□ 1.16
NELFA-201ENST00000333877 SLFNL1Q499Z3 407 aa22.27■■□□□ 1.16
NELFA-201ENST00000333877 BICDL1Q6ZP65 573 aa22.27■■□□□ 1.16
NELFA-201ENST00000333877 MPHOSPH8Q99549 860 aa22.27■■□□□ 1.16
NELFA-201ENST00000333877 HELLSQ9NRZ9 838 aa22.27■■□□□ 1.16
NELFA-201ENST00000333877 NARFQ9UHQ1 456 aa22.27■■□□□ 1.16
NELFA-201ENST00000333877 ABCC12Q96J65 1359 aa22.27■■□□□ 1.16
NELFA-201ENST00000333877 AK2P54819 239 aa22.27■■□□□ 1.16
NELFA-201ENST00000333877 USPL1Q5W0Q7 1092 aa22.27■■□□□ 1.16
NELFA-201ENST00000333877 HELBQ8NG08 1087 aaPredicted RBP22.27■■□□□ 1.16
NELFA-201ENST00000333877 BCL2L12Q9HB09 334 aa22.27■■□□□ 1.16
NELFA-201ENST00000333877 ZSWIM6Q9HCJ5 1215 aa22.27■■□□□ 1.16
NELFA-201ENST00000333877 RTL9Q8NET4 1388 aa22.26■■□□□ 1.15
NELFA-201ENST00000333877 RGL2O15211 777 aa22.26■■□□□ 1.15
NELFA-201ENST00000333877 RNF113AO15541 343 aaKnown RBP22.26■■□□□ 1.15
NELFA-201ENST00000333877 ERFEQ4G0M1 354 aa22.26■■□□□ 1.15
NELFA-201ENST00000333877 ZMYM1Q5SVZ6 1142 aa22.26■■□□□ 1.15
NELFA-201ENST00000333877 TBC1D9BQ66K14 1250 aa22.26■■□□□ 1.15
NELFA-201ENST00000333877 CYP46A1Q9Y6A2 500 aa22.26■■□□□ 1.15
NELFA-201ENST00000333877 DEKP35659 375 aaKnown RBP22.26■■□□□ 1.15
NELFA-201ENST00000333877 NUCB2P80303 420 aa22.26■■□□□ 1.15
NELFA-201ENST00000333877 PUM3Q15397 648 aaKnown RBP22.26■■□□□ 1.15
NELFA-201ENST00000333877 SRP68Q9UHB9 627 aaKnown RBP22.26■■□□□ 1.15
NELFA-201ENST00000333877 RTCBQ9Y3I0 505 aaKnown RBP22.26■■□□□ 1.15
NELFA-201ENST00000333877 TAF1LQ8IZX4 1826 aa22.25■■□□□ 1.15
NELFA-201ENST00000333877 ZAP70P43403 619 aa22.25■■□□□ 1.15
NELFA-201ENST00000333877 ZPR1O75312 459 aa22.25■■□□□ 1.15
NELFA-201ENST00000333877 RUFY3Q7L099 469 aa22.25■■□□□ 1.15
NELFA-201ENST00000333877 INTS4Q96HW7 963 aaKnown RBP22.25■■□□□ 1.15
NELFA-201ENST00000333877 PDRG1Q9NUG6 133 aa22.25■■□□□ 1.15
NELFA-201ENST00000333877 IGHMBP2P38935 993 aaKnown RBP22.24■■□□□ 1.15
NELFA-201ENST00000333877 PI16Q6UXB8 463 aa22.24■■□□□ 1.15
NELFA-201ENST00000333877 LPIN2Q92539 896 aa22.24■■□□□ 1.15
NELFA-201ENST00000333877 GBP4Q96PP9 640 aa22.24■■□□□ 1.15
NELFA-201ENST00000333877 HMG20BQ9P0W2 317 aa22.24■■□□□ 1.15
NELFA-201ENST00000333877 FGFR2P21802 821 aa22.23■■□□□ 1.15
NELFA-201ENST00000333877 MCAMP43121 646 aa22.23■■□□□ 1.15
NELFA-201ENST00000333877 VPS53Q5VIR6 699 aa22.23■■□□□ 1.15
NELFA-201ENST00000333877 BCL11BQ9C0K0 894 aaPredicted RBP22.23■■□□□ 1.15
NELFA-201ENST00000333877 U3KPZ7 1027 aaPredicted RBP22.23■■□□□ 1.15
NELFA-201ENST00000333877 RPAP1Q9BWH6 1393 aaPredicted RBP22.23■■□□□ 1.15
NELFA-201ENST00000333877 PSMA5P28066 241 aa22.23■■□□□ 1.15
NELFA-201ENST00000333877 PKP1Q13835 747 aa22.23■■□□□ 1.15
NELFA-201ENST00000333877 LRRFIP1Q32MZ4 808 aaKnown RBP22.23■■□□□ 1.15
NELFA-201ENST00000333877 AMIGO3Q86WK7 504 aa22.23■■□□□ 1.15
NELFA-201ENST00000333877 ZNF512BQ96KM6 892 aaPredicted RBP22.23■■□□□ 1.15
NELFA-201ENST00000333877 LARP6Q9BRS8 491 aaKnown RBP22.23■■□□□ 1.15
NELFA-201ENST00000333877 LIMCH1Q9UPQ0 1083 aa22.23■■□□□ 1.15
NELFA-201ENST00000333877 TAF6LQ9Y6J9 622 aa22.23■■□□□ 1.15
NELFA-201ENST00000333877 GTF2E1P29083 439 aaPredicted RBP22.22■■□□□ 1.15
NELFA-201ENST00000333877 CYP2E1P05181 493 aaPredicted RBP22.22■■□□□ 1.15
NELFA-201ENST00000333877 TSGA10IPQ3SY00 556 aa22.22■■□□□ 1.15
NELFA-201ENST00000333877 CCDC102BQ68D86 513 aa22.22■■□□□ 1.15
NELFA-201ENST00000333877 ARHGEF1Q92888 912 aaKnown RBP22.22■■□□□ 1.15
NELFA-201ENST00000333877 AKAP11Q9UKA4 1901 aa22.21■■□□□ 1.15
NELFA-201ENST00000333877 DDX11L8A8MPP1 907 aa22.21■■□□□ 1.15
NELFA-201ENST00000333877 MAST3O60307 1309 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms