RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 GTF3C6Q969F1 213 aa12.77□□□□□ -0.37
CCDC172-201ENST00000333254 AGXT2Q9BYV1 514 aa12.77□□□□□ -0.37
CCDC172-201ENST00000333254 COL14A1Q05707 1796 aaKnown RBP12.76□□□□□ -0.37
CCDC172-201ENST00000333254 TPM2P07951 284 aa12.76□□□□□ -0.37
CCDC172-201ENST00000333254 LRRFIP1Q32MZ4 808 aaKnown RBP12.76□□□□□ -0.37
CCDC172-201ENST00000333254 ZMYM1Q5SVZ6 1142 aa12.76□□□□□ -0.37
CCDC172-201ENST00000333254 SCAND2PQ9GZW5 306 aaPredicted RBP12.76□□□□□ -0.37
CCDC172-201ENST00000333254 CICQ96RK0 1608 aaPredicted RBP12.75□□□□□ -0.37
CCDC172-201ENST00000333254 FIBPO43427 364 aa12.75□□□□□ -0.37
CCDC172-201ENST00000333254 DNM1Q05193 864 aaKnown RBP12.75□□□□□ -0.37
CCDC172-201ENST00000333254 TTLL7Q6ZT98 887 aa12.75□□□□□ -0.37
CCDC172-201ENST00000333254 TOM1L2Q6ZVM7 507 aa12.75□□□□□ -0.37
CCDC172-201ENST00000333254 PAG1Q9NWQ8 432 aa12.75□□□□□ -0.37
CCDC172-201ENST00000333254 NWD2Q9ULI1 1742 aa12.75□□□□□ -0.37
CCDC172-201ENST00000333254 AKAP11Q9UKA4 1901 aa12.75□□□□□ -0.37
CCDC172-201ENST00000333254 VPS37CA5D8V6 355 aaPredicted RBP12.74□□□□□ -0.37
CCDC172-201ENST00000333254 NECAB1Q8N987 351 aa12.74□□□□□ -0.37
CCDC172-201ENST00000333254 SMARCC2Q8TAQ2 1214 aa12.74□□□□□ -0.37
CCDC172-201ENST00000333254 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.74□□□□□ -0.37
CCDC172-201ENST00000333254 LRP5O75197 1615 aa12.74□□□□□ -0.37
CCDC172-201ENST00000333254 CDHR2Q9BYE9 1310 aa12.74□□□□□ -0.37
CCDC172-201ENST00000333254 NUP98P52948 1817 aa12.74□□□□□ -0.37
CCDC172-201ENST00000333254 CYP21A2P08686 494 aa12.73□□□□□ -0.37
CCDC172-201ENST00000333254 RGS22Q8NE09 1264 aa12.73□□□□□ -0.37
CCDC172-201ENST00000333254 EDC3Q96F86 508 aaKnown RBP12.73□□□□□ -0.37
CCDC172-201ENST00000333254 NAP1L5Q96NT1 182 aaPredicted RBP12.73□□□□□ -0.37
CCDC172-201ENST00000333254 LARP6Q9BRS8 491 aaKnown RBP12.73□□□□□ -0.37
CCDC172-201ENST00000333254 ZSCAN16Q9H4T2 348 aaPredicted RBP12.73□□□□□ -0.37
CCDC172-201ENST00000333254 COL22A1Q8NFW1 1626 aaPredicted RBP12.73□□□□□ -0.37
CCDC172-201ENST00000333254 DISP2A7MBM2 1401 aa12.73□□□□□ -0.37
CCDC172-201ENST00000333254 PFKFB2O60825 505 aa12.73□□□□□ -0.37
CCDC172-201ENST00000333254 PCCAP05165 728 aaPredicted RBP12.73□□□□□ -0.37
CCDC172-201ENST00000333254 ZFYP08048 801 aaPredicted RBP12.73□□□□□ -0.37
CCDC172-201ENST00000333254 PIP4K2AP48426 406 aaPredicted RBP12.73□□□□□ -0.37
CCDC172-201ENST00000333254 HMGN5P82970 282 aaKnown RBP12.73□□□□□ -0.37
CCDC172-201ENST00000333254 TCIRG1Q13488 830 aa12.73□□□□□ -0.37
CCDC172-201ENST00000333254 ATL3Q6DD88 541 aa12.73□□□□□ -0.37
CCDC172-201ENST00000333254 RBM43Q6ZSC3 357 aaKnown RBP12.73□□□□□ -0.37
CCDC172-201ENST00000333254 CDC37L1Q7L3B6 337 aa12.73□□□□□ -0.37
CCDC172-201ENST00000333254 DHX32Q7L7V1 743 aaKnown RBP12.73□□□□□ -0.37
CCDC172-201ENST00000333254 TTC6Q86TZ1 520 aa12.73□□□□□ -0.37
CCDC172-201ENST00000333254 DNAJC2Q99543 621 aaKnown RBP12.73□□□□□ -0.37
CCDC172-201ENST00000333254 AKAP2Q9Y2D5 859 aa12.73□□□□□ -0.37
CCDC172-201ENST00000333254 KIF3AQ9Y496 699 aa12.73□□□□□ -0.37
CCDC172-201ENST00000333254 TAF6LQ9Y6J9 622 aa12.73□□□□□ -0.37
CCDC172-201ENST00000333254 RNF214Q8ND24 703 aa12.72□□□□□ -0.37
CCDC172-201ENST00000333254 DDX19AQ9NUU7 478 aaKnown RBP12.72□□□□□ -0.37
CCDC172-201ENST00000333254 RNF113AO15541 343 aaKnown RBP12.71□□□□□ -0.37
CCDC172-201ENST00000333254 CSF1RP07333 972 aa12.71□□□□□ -0.37
CCDC172-201ENST00000333254 EVCP57679 992 aa12.71□□□□□ -0.37
CCDC172-201ENST00000333254 EXOSC10Q01780 885 aaKnown RBP12.71□□□□□ -0.37
CCDC172-201ENST00000333254 FOXD4L6Q3SYB3 417 aaPredicted RBP12.71□□□□□ -0.37
CCDC172-201ENST00000333254 NAA16Q6N069 864 aaPredicted RBP12.71□□□□□ -0.37
CCDC172-201ENST00000333254 FOXD4L3Q6VB84 417 aaPredicted RBP12.71□□□□□ -0.37
CCDC172-201ENST00000333254 DDX46Q7L014 1031 aaKnown RBP12.71□□□□□ -0.37
CCDC172-201ENST00000333254 JARID2Q92833 1246 aaPredicted RBP12.71□□□□□ -0.37
CCDC172-201ENST00000333254 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.71□□□□□ -0.37
CCDC172-201ENST00000333254 SLAIN2Q9P270 581 aa12.71□□□□□ -0.37
CCDC172-201ENST00000333254 DOCK2Q92608 1830 aa12.71□□□□□ -0.37
CCDC172-201ENST00000333254 ATRNO75882 1429 aa12.71□□□□□ -0.37
CCDC172-201ENST00000333254 LAMB2P55268 1798 aa12.71□□□□□ -0.38
CCDC172-201ENST00000333254 RREB1Q92766 1687 aa12.71□□□□□ -0.38
CCDC172-201ENST00000333254 A0A1B0GUL7 405 aa12.7□□□□□ -0.38
CCDC172-201ENST00000333254 A1BGP04217 495 aa12.7□□□□□ -0.38
CCDC172-201ENST00000333254 IFIT1P09914 478 aaKnown RBP12.7□□□□□ -0.38
CCDC172-201ENST00000333254 CCDC192P0DO97 292 aa12.7□□□□□ -0.38
CCDC172-201ENST00000333254 RESTQ13127 1097 aa12.7□□□□□ -0.38
CCDC172-201ENST00000333254 COL9A3Q14050 684 aaPredicted RBP12.7□□□□□ -0.38
CCDC172-201ENST00000333254 Q6ZUG5 572 aa12.7□□□□□ -0.38
CCDC172-201ENST00000333254 CAVIN2O95810 425 aa12.7□□□□□ -0.38
CCDC172-201ENST00000333254 TPM3P06753 285 aa12.7□□□□□ -0.38
CCDC172-201ENST00000333254 HSP90AB3PQ58FF7 597 aa12.7□□□□□ -0.38
CCDC172-201ENST00000333254 STOX1Q6ZVD7 989 aa12.7□□□□□ -0.38
CCDC172-201ENST00000333254 ZNF274Q96GC6 653 aaPredicted RBP12.7□□□□□ -0.38
CCDC172-201ENST00000333254 ZNF512BQ96KM6 892 aaPredicted RBP12.7□□□□□ -0.38
CCDC172-201ENST00000333254 TMOD3Q9NYL9 352 aa12.7□□□□□ -0.38
CCDC172-201ENST00000333254 CEP126Q9P2H0 1117 aa12.7□□□□□ -0.38
CCDC172-201ENST00000333254 USP25Q9UHP3 1055 aa12.7□□□□□ -0.38
CCDC172-201ENST00000333254 RIC1Q4ADV7 1423 aa12.7□□□□□ -0.38
CCDC172-201ENST00000333254 MAST3O60307 1309 aa12.69□□□□□ -0.38
CCDC172-201ENST00000333254 WDR19Q8NEZ3 1342 aa12.69□□□□□ -0.38
CCDC172-201ENST00000333254 SALL1Q9NSC2 1324 aa12.69□□□□□ -0.38
CCDC172-201ENST00000333254 GOLIM4O00461 696 aa12.69□□□□□ -0.38
CCDC172-201ENST00000333254 KDM4AO75164 1064 aa12.69□□□□□ -0.38
CCDC172-201ENST00000333254 MAP3K11Q16584 847 aa12.69□□□□□ -0.38
CCDC172-201ENST00000333254 CCDC57Q2TAC2 916 aa12.69□□□□□ -0.38
CCDC172-201ENST00000333254 CCDC129Q6ZRS4 1044 aa12.69□□□□□ -0.38
CCDC172-201ENST00000333254 DDX54Q8TDD1 881 aaKnown RBP12.69□□□□□ -0.38
CCDC172-201ENST00000333254 LEO1Q8WVC0 666 aaPredicted RBP12.69□□□□□ -0.38
CCDC172-201ENST00000333254 NEUROD6Q96NK8 337 aa12.69□□□□□ -0.38
CCDC172-201ENST00000333254 SEC62Q99442 399 aaKnown RBP12.69□□□□□ -0.38
CCDC172-201ENST00000333254 NUP62CLQ9H1M0 184 aa12.69□□□□□ -0.38
CCDC172-201ENST00000333254 RNF216Q9NWF9 866 aaPredicted RBP12.69□□□□□ -0.38
CCDC172-201ENST00000333254 CTNNA3Q9UI47 895 aa12.69□□□□□ -0.38
CCDC172-201ENST00000333254 CFAP45Q9UL16 551 aa12.69□□□□□ -0.38
CCDC172-201ENST00000333254 CHMP3Q9Y3E7 222 aa12.69□□□□□ -0.38
CCDC172-201ENST00000333254 C4AP0C0L4 1744 aa12.69□□□□□ -0.38
CCDC172-201ENST00000333254 C4BP0C0L5 1744 aa12.69□□□□□ -0.38
CCDC172-201ENST00000333254 CHD4Q14839 1912 aa12.68□□□□□ -0.38
CCDC172-201ENST00000333254 HSPD1P10809 573 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms