RNA–Protein interactions for RNA: ENST00000329629.8

FNDC1-202, Transcript of fibronectin type III domain containing 1, humanhuman

TSL 1 (best)

Gene FNDC1, Length 6,034 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-202ENST00000329629 DAAM2Q86T65 1068 aa16.11■□□□□ 0.17
FNDC1-202ENST00000329629 CEP57Q86XR8 500 aa16.11■□□□□ 0.17
FNDC1-202ENST00000329629 EHMT1Q9H9B1 1298 aa16.11■□□□□ 0.17
FNDC1-202ENST00000329629 UBA7P41226 1012 aa16.11■□□□□ 0.17
FNDC1-202ENST00000329629 CAPN2P17655 700 aa16.1■□□□□ 0.17
FNDC1-202ENST00000329629 USP48Q86UV5 1035 aa16.1■□□□□ 0.17
FNDC1-202ENST00000329629 CDC5LQ99459 802 aaKnown RBP16.1■□□□□ 0.17
FNDC1-202ENST00000329629 TRIM27P14373 513 aa16.1■□□□□ 0.17
FNDC1-202ENST00000329629 AOPEPQ8N6M6 819 aa16.1■□□□□ 0.17
FNDC1-202ENST00000329629 VPS18Q9P253 973 aa16.1■□□□□ 0.17
FNDC1-202ENST00000329629 PPIP5K1Q6PFW1 1433 aa16.1■□□□□ 0.17
FNDC1-202ENST00000329629 MAP3K2Q9Y2U5 619 aa16.1■□□□□ 0.17
FNDC1-202ENST00000329629 ANKRD36BQ8N2N9 1353 aa16.1■□□□□ 0.17
FNDC1-202ENST00000329629 ACTN2P35609 894 aa16.1■□□□□ 0.17
FNDC1-202ENST00000329629 CWC25Q9NXE8 425 aaPredicted RBP16.1■□□□□ 0.17
FNDC1-202ENST00000329629 IQCGQ9H095 443 aaKnown RBP16.1■□□□□ 0.17
FNDC1-202ENST00000329629 LMTK3Q96Q04 1460 aa16.09■□□□□ 0.17
FNDC1-202ENST00000329629 IGHDP01880 384 aa16.09■□□□□ 0.17
FNDC1-202ENST00000329629 SNRPA1P09661 255 aaKnown RBP16.09■□□□□ 0.17
FNDC1-202ENST00000329629 CCDC121Q6ZUS5 278 aa16.09■□□□□ 0.17
FNDC1-202ENST00000329629 TMX3Q96JJ7 454 aa16.09■□□□□ 0.17
FNDC1-202ENST00000329629 CAPZA3Q96KX2 299 aa16.09■□□□□ 0.17
FNDC1-202ENST00000329629 TBC1D32Q96NH3 1257 aa16.09■□□□□ 0.17
FNDC1-202ENST00000329629 OPA1O60313 960 aa16.09■□□□□ 0.17
FNDC1-202ENST00000329629 KRT13P13646 458 aa16.09■□□□□ 0.17
FNDC1-202ENST00000329629 TTC22Q5TAA0 569 aa16.09■□□□□ 0.17
FNDC1-202ENST00000329629 CYLC1P35663 651 aaPredicted RBP16.09■□□□□ 0.17
FNDC1-202ENST00000329629 TBC1D5Q92609 795 aa16.09■□□□□ 0.17
FNDC1-202ENST00000329629 SNRKQ9NRH2 765 aa16.09■□□□□ 0.17
FNDC1-202ENST00000329629 CFAP57Q96MR6 1250 aa16.09■□□□□ 0.17
FNDC1-202ENST00000329629 DNAJC25Q9H1X3 360 aa16.09■□□□□ 0.17
FNDC1-202ENST00000329629 ADAMTS12P58397 1594 aa16.08■□□□□ 0.17
FNDC1-202ENST00000329629 CLCN1P35523 988 aa16.08■□□□□ 0.17
FNDC1-202ENST00000329629 ATP6V1AP38606 617 aa16.08■□□□□ 0.17
FNDC1-202ENST00000329629 KAT14Q9H8E8 782 aa16.08■□□□□ 0.17
FNDC1-202ENST00000329629 SAMM50Q9Y512 469 aa16.08■□□□□ 0.17
FNDC1-202ENST00000329629 NUP153P49790 1475 aaKnown RBP16.08■□□□□ 0.17
FNDC1-202ENST00000329629 TMEM110-MUSTN1A8MSY1 372 aa16.08■□□□□ 0.16
FNDC1-202ENST00000329629 DDB1Q16531 1140 aa16.08■□□□□ 0.16
FNDC1-202ENST00000329629 ABCC10Q5T3U5 1492 aa16.08■□□□□ 0.16
FNDC1-202ENST00000329629 WDR78Q5VTH9 848 aa16.08■□□□□ 0.16
FNDC1-202ENST00000329629 PYM1Q9BRP8 204 aaKnown RBP16.08■□□□□ 0.16
FNDC1-202ENST00000329629 RASAL2Q9UJF2 1139 aa16.08■□□□□ 0.16
FNDC1-202ENST00000329629 SMIM23A6NLE4 172 aa16.08■□□□□ 0.16
FNDC1-202ENST00000329629 XRCC6P12956 609 aaKnown RBP eCLIP16.08■□□□□ 0.16
FNDC1-202ENST00000329629 TTC31Q49AM3 519 aaPredicted RBP16.08■□□□□ 0.16
FNDC1-202ENST00000329629 RMND1Q9NWS8 449 aa16.08■□□□□ 0.16
FNDC1-202ENST00000329629 IGSF3O75054 1194 aa16.08■□□□□ 0.16
FNDC1-202ENST00000329629 MYCNP04198 464 aaPredicted RBP16.08■□□□□ 0.16
FNDC1-202ENST00000329629 SYT1P21579 422 aa16.08■□□□□ 0.16
FNDC1-202ENST00000329629 DNAJC21Q5F1R6 531 aaKnown RBP16.08■□□□□ 0.16
FNDC1-202ENST00000329629 NBPF6Q5VWK0 638 aa16.08■□□□□ 0.16
FNDC1-202ENST00000329629 STXBP4Q6ZWJ1 553 aa16.08■□□□□ 0.16
FNDC1-202ENST00000329629 NBPF5PQ86XG9 351 aaPredicted RBP16.08■□□□□ 0.16
FNDC1-202ENST00000329629 ANKS4BQ8N8V4 417 aa16.08■□□□□ 0.16
FNDC1-202ENST00000329629 GOLGA1Q92805 767 aa16.08■□□□□ 0.16
FNDC1-202ENST00000329629 NBPF4Q96M43 638 aa16.08■□□□□ 0.16
FNDC1-202ENST00000329629 SELENOOQ9BVL4 669 aa16.08■□□□□ 0.16
FNDC1-202ENST00000329629 C19orf44Q9H6X5 657 aa16.08■□□□□ 0.16
FNDC1-202ENST00000329629 BICD1Q96G01 975 aa16.07■□□□□ 0.16
FNDC1-202ENST00000329629 ECHDC1Q9NTX5 307 aa16.07■□□□□ 0.16
FNDC1-202ENST00000329629 CTTNBP2Q8WZ74 1663 aa16.07■□□□□ 0.16
FNDC1-202ENST00000329629 CTAGE9A4FU28 777 aa16.07■□□□□ 0.16
FNDC1-202ENST00000329629 CCDC129Q6ZRS4 1044 aa16.07■□□□□ 0.16
FNDC1-202ENST00000329629 FEZ1Q99689 392 aa16.07■□□□□ 0.16
FNDC1-202ENST00000329629 ZSCAN16Q9H4T2 348 aaPredicted RBP16.07■□□□□ 0.16
FNDC1-202ENST00000329629 TTC12Q9H892 705 aaPredicted RBP16.07■□□□□ 0.16
FNDC1-202ENST00000329629 NCOA7Q8NI08 942 aa16.07■□□□□ 0.16
FNDC1-202ENST00000329629 CTAGE1Q96RT6 745 aa16.07■□□□□ 0.16
FNDC1-202ENST00000329629 KIAA0556O60303 1618 aa16.07■□□□□ 0.16
FNDC1-202ENST00000329629 PABPN1LA6NDY0 278 aaKnown RBP16.07■□□□□ 0.16
FNDC1-202ENST00000329629 GJC1P36383 396 aa16.07■□□□□ 0.16
FNDC1-202ENST00000329629 BMP2KLQ5H9B9 411 aa16.07■□□□□ 0.16
FNDC1-202ENST00000329629 MFSD6Q6ZSS7 791 aa16.07■□□□□ 0.16
FNDC1-202ENST00000329629 LRRC2Q9BYS8 371 aa16.07■□□□□ 0.16
FNDC1-202ENST00000329629 RPRD2Q5VT52 1461 aaKnown RBP16.07■□□□□ 0.16
FNDC1-202ENST00000329629 TRAPPC8Q9Y2L5 1435 aa16.07■□□□□ 0.16
FNDC1-202ENST00000329629 SLU7O95391 586 aaKnown RBP16.07■□□□□ 0.16
FNDC1-202ENST00000329629 KIF5BP33176 963 aa16.07■□□□□ 0.16
FNDC1-202ENST00000329629 FLIIQ13045 1269 aa16.07■□□□□ 0.16
FNDC1-202ENST00000329629 TSPY2A6NKD2 308 aa16.06■□□□□ 0.16
FNDC1-202ENST00000329629 CAVIN2O95810 425 aa16.06■□□□□ 0.16
FNDC1-202ENST00000329629 CCDC63Q8NA47 563 aa16.06■□□□□ 0.16
FNDC1-202ENST00000329629 SREK1Q8WXA9 508 aaKnown RBP16.06■□□□□ 0.16
FNDC1-202ENST00000329629 PTPRCP08575 1304 aa16.06■□□□□ 0.16
FNDC1-202ENST00000329629 ATP5J2-PTCD1G3V325 749 aa16.06■□□□□ 0.16
FNDC1-202ENST00000329629 ARL1P40616 181 aaPredicted RBP16.06■□□□□ 0.16
FNDC1-202ENST00000329629 STAT6P42226 847 aa16.06■□□□□ 0.16
FNDC1-202ENST00000329629 FERMT1Q9BQL6 677 aa16.06■□□□□ 0.16
FNDC1-202ENST00000329629 DISP3Q9P2K9 1392 aa16.06■□□□□ 0.16
FNDC1-202ENST00000329629 TBCAO75347 108 aaKnown RBP16.06■□□□□ 0.16
FNDC1-202ENST00000329629 NAP1L3Q99457 506 aaPredicted RBP16.06■□□□□ 0.16
FNDC1-202ENST00000329629 KARSQ15046 597 aaKnown RBP16.06■□□□□ 0.16
FNDC1-202ENST00000329629 SPAG5Q96R06 1193 aa16.06■□□□□ 0.16
FNDC1-202ENST00000329629 ZEB2O60315 1214 aa16.05■□□□□ 0.16
FNDC1-202ENST00000329629 PHACTR2O75167 634 aa16.05■□□□□ 0.16
FNDC1-202ENST00000329629 DDX12PQ92771 950 aa16.05■□□□□ 0.16
FNDC1-202ENST00000329629 CCDC174Q6PII3 467 aa16.05■□□□□ 0.16
FNDC1-202ENST00000329629 OTUD6BQ8N6M0 293 aa16.05■□□□□ 0.16
FNDC1-202ENST00000329629 CABLES1Q8TDN4 633 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms