RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 CCNL1Q9UK58 526 aaPredicted RBP17.99■□□□□ 0.47
TPM3-205ENST00000328159 TAF1LQ8IZX4 1826 aa17.99■□□□□ 0.47
TPM3-205ENST00000328159 GOLIM4O00461 696 aa17.99■□□□□ 0.47
TPM3-205ENST00000328159 RPS6KA4O75676 772 aa17.99■□□□□ 0.47
TPM3-205ENST00000328159 PRPF40BQ6NWY9 871 aaKnown RBP17.99■□□□□ 0.47
TPM3-205ENST00000328159 UPF3BQ9BZI7 483 aaKnown RBP17.99■□□□□ 0.47
TPM3-205ENST00000328159 RBM8AQ9Y5S9 174 aaKnown RBP17.99■□□□□ 0.47
TPM3-205ENST00000328159 NECTIN1Q15223 517 aa17.98■□□□□ 0.47
TPM3-205ENST00000328159 TTC39AQ5SRH9 613 aa17.98■□□□□ 0.47
TPM3-205ENST00000328159 ZNF589Q86UQ0 364 aaPredicted RBP17.97■□□□□ 0.47
TPM3-205ENST00000328159 VGLL2Q8N8G2 317 aa17.97■□□□□ 0.47
TPM3-205ENST00000328159 TMX3Q96JJ7 454 aa17.97■□□□□ 0.47
TPM3-205ENST00000328159 KCNJ4P48050 445 aa17.96■□□□□ 0.47
TPM3-205ENST00000328159 CCDC152Q4G0S7 254 aa17.96■□□□□ 0.47
TPM3-205ENST00000328159 QTRT2Q9H974 415 aaKnown RBP17.96■□□□□ 0.47
TPM3-205ENST00000328159 RTL9Q8NET4 1388 aa17.96■□□□□ 0.47
TPM3-205ENST00000328159 ABCC12Q96J65 1359 aa17.96■□□□□ 0.47
TPM3-205ENST00000328159 RAB3GAP1Q15042 981 aa17.96■□□□□ 0.47
TPM3-205ENST00000328159 CREB3L3Q68CJ9 461 aa17.96■□□□□ 0.47
TPM3-205ENST00000328159 NARFQ9UHQ1 456 aa17.96■□□□□ 0.47
TPM3-205ENST00000328159 MROH5Q6ZUA9 1318 aa17.96■□□□□ 0.47
TPM3-205ENST00000328159 GNPATO15228 680 aa17.95■□□□□ 0.46
TPM3-205ENST00000328159 TAF5LO75529 589 aa17.95■□□□□ 0.46
TPM3-205ENST00000328159 PDE8BO95263 885 aa17.95■□□□□ 0.46
TPM3-205ENST00000328159 MCMDC2Q4G0Z9 681 aa17.95■□□□□ 0.46
TPM3-205ENST00000328159 BCL2L12Q9HB09 334 aa17.95■□□□□ 0.46
TPM3-205ENST00000328159 CWC22Q9HCG8 908 aaKnown RBP17.95■□□□□ 0.46
TPM3-205ENST00000328159 CHGBP05060 677 aa17.94■□□□□ 0.46
TPM3-205ENST00000328159 ZKSCAN1P17029 563 aaPredicted RBP17.94■□□□□ 0.46
TPM3-205ENST00000328159 SMIM5Q71RC9 77 aa17.94■□□□□ 0.46
TPM3-205ENST00000328159 TM6SF1Q9BZW5 370 aa17.94■□□□□ 0.46
TPM3-205ENST00000328159 SEC31BQ9NQW1 1179 aa17.94■□□□□ 0.46
TPM3-205ENST00000328159 ARAP2Q8WZ64 1704 aa17.94■□□□□ 0.46
TPM3-205ENST00000328159 SLC27A2O14975 620 aa17.94■□□□□ 0.46
TPM3-205ENST00000328159 CUL4AQ13619 759 aa17.94■□□□□ 0.46
TPM3-205ENST00000328159 USPL1Q5W0Q7 1092 aa17.94■□□□□ 0.46
TPM3-205ENST00000328159 TTC14Q96N46 770 aa17.94■□□□□ 0.46
TPM3-205ENST00000328159 BCL11BQ9C0K0 894 aaPredicted RBP17.94■□□□□ 0.46
TPM3-205ENST00000328159 HELLSQ9NRZ9 838 aa17.94■□□□□ 0.46
TPM3-205ENST00000328159 RTCBQ9Y3I0 505 aaKnown RBP17.94■□□□□ 0.46
TPM3-205ENST00000328159 CASZ1Q86V15 1759 aa17.93■□□□□ 0.46
TPM3-205ENST00000328159 C4BP0C0L5 1744 aa17.93■□□□□ 0.46
TPM3-205ENST00000328159 RNF113AO15541 343 aaKnown RBP17.93■□□□□ 0.46
TPM3-205ENST00000328159 CASTP20810 708 aaKnown RBP17.93■□□□□ 0.46
TPM3-205ENST00000328159 MCM4P33991 863 aa17.93■□□□□ 0.46
TPM3-205ENST00000328159 FKBP4Q02790 459 aaKnown RBP eCLIP17.93■□□□□ 0.46
TPM3-205ENST00000328159 ERFEQ4G0M1 354 aa17.93■□□□□ 0.46
TPM3-205ENST00000328159 ZMYM1Q5SVZ6 1142 aa17.93■□□□□ 0.46
TPM3-205ENST00000328159 RNF20Q5VTR2 975 aa17.93■□□□□ 0.46
TPM3-205ENST00000328159 TBC1D9BQ66K14 1250 aa17.93■□□□□ 0.46
TPM3-205ENST00000328159 NOL8Q76FK4 1167 aaKnown RBP17.93■□□□□ 0.46
TPM3-205ENST00000328159 TNPO1Q92973 898 aaKnown RBP17.93■□□□□ 0.46
TPM3-205ENST00000328159 ZNF512BQ96KM6 892 aaPredicted RBP17.93■□□□□ 0.46
TPM3-205ENST00000328159 JAKMIP1Q96N16 626 aaKnown RBP17.93■□□□□ 0.46
TPM3-205ENST00000328159 SEC62Q99442 399 aaKnown RBP17.93■□□□□ 0.46
TPM3-205ENST00000328159 SRP68Q9UHB9 627 aaKnown RBP17.93■□□□□ 0.46
TPM3-205ENST00000328159 AKAP11Q9UKA4 1901 aa17.93■□□□□ 0.46
TPM3-205ENST00000328159 COL24A1Q17RW2 1714 aa17.92■□□□□ 0.46
TPM3-205ENST00000328159 SSFA2P28290 1259 aa17.92■□□□□ 0.46
TPM3-205ENST00000328159 SCARF1Q14162 830 aa17.92■□□□□ 0.46
TPM3-205ENST00000328159 PUM3Q15397 648 aaKnown RBP17.92■□□□□ 0.46
TPM3-205ENST00000328159 BICDL1Q6ZP65 573 aa17.92■□□□□ 0.46
TPM3-205ENST00000328159 CCDC129Q6ZRS4 1044 aa17.92■□□□□ 0.46
TPM3-205ENST00000328159 ZGPATQ8N5A5 531 aaKnown RBP17.92■□□□□ 0.46
TPM3-205ENST00000328159 MPHOSPH8Q99549 860 aa17.92■□□□□ 0.46
TPM3-205ENST00000328159 ZSWIM6Q9HCJ5 1215 aa17.92■□□□□ 0.46
TPM3-205ENST00000328159 BRWD3Q6RI45 1802 aa17.92■□□□□ 0.46
TPM3-205ENST00000328159 ZPR1O75312 459 aa17.91■□□□□ 0.46
TPM3-205ENST00000328159 FGFR2P21802 821 aa17.91■□□□□ 0.46
TPM3-205ENST00000328159 IGHMBP2P38935 993 aaKnown RBP17.91■□□□□ 0.46
TPM3-205ENST00000328159 ADCK5Q3MIX3 580 aa17.91■□□□□ 0.46
TPM3-205ENST00000328159 HELBQ8NG08 1087 aaPredicted RBP17.91■□□□□ 0.46
TPM3-205ENST00000328159 LPIN2Q92539 896 aa17.91■□□□□ 0.46
TPM3-205ENST00000328159 HMG20BQ9P0W2 317 aa17.91■□□□□ 0.46
TPM3-205ENST00000328159 MYH7P12883 1935 aa17.91■□□□□ 0.46
TPM3-205ENST00000328159 AK2P54819 239 aa17.91■□□□□ 0.46
TPM3-205ENST00000328159 LRRFIP1Q32MZ4 808 aaKnown RBP17.91■□□□□ 0.46
TPM3-205ENST00000328159 CYP46A1Q9Y6A2 500 aa17.91■□□□□ 0.46
TPM3-205ENST00000328159 U3KPZ7 1027 aaPredicted RBP17.91■□□□□ 0.46
TPM3-205ENST00000328159 RPAP1Q9BWH6 1393 aaPredicted RBP17.9■□□□□ 0.46
TPM3-205ENST00000328159 C4AP0C0L4 1744 aa17.9■□□□□ 0.46
TPM3-205ENST00000328159 ZAP70P43403 619 aa17.9■□□□□ 0.46
TPM3-205ENST00000328159 NUCB2P80303 420 aa17.9■□□□□ 0.46
TPM3-205ENST00000328159 INTS4Q96HW7 963 aaKnown RBP17.9■□□□□ 0.46
TPM3-205ENST00000328159 SLC5A1P13866 664 aa17.89■□□□□ 0.45
TPM3-205ENST00000328159 CPA1P15085 419 aa17.89■□□□□ 0.45
TPM3-205ENST00000328159 PSMA5P28066 241 aa17.89■□□□□ 0.45
TPM3-205ENST00000328159 SF3B3Q15393 1217 aaKnown RBP17.89■□□□□ 0.45
TPM3-205ENST00000328159 SLFNL1Q499Z3 407 aa17.89■□□□□ 0.45
TPM3-205ENST00000328159 SLC10A5Q5PT55 438 aa17.89■□□□□ 0.45
TPM3-205ENST00000328159 VPS53Q5VIR6 699 aa17.89■□□□□ 0.45
TPM3-205ENST00000328159 ARHGEF1Q92888 912 aaKnown RBP17.89■□□□□ 0.45
TPM3-205ENST00000328159 CDC5LQ99459 802 aaKnown RBP17.89■□□□□ 0.45
TPM3-205ENST00000328159 NYXQ9GZU5 481 aa17.89■□□□□ 0.45
TPM3-205ENST00000328159 PDRG1Q9NUG6 133 aa17.89■□□□□ 0.45
TPM3-205ENST00000328159 ZFYP08048 801 aaPredicted RBP17.89■□□□□ 0.45
TPM3-205ENST00000328159 UQCRFS1P1P0C7P4 283 aa17.89■□□□□ 0.45
TPM3-205ENST00000328159 MCAMP43121 646 aa17.89■□□□□ 0.45
TPM3-205ENST00000328159 TSGA10IPQ3SY00 556 aa17.89■□□□□ 0.45
TPM3-205ENST00000328159 RUFY3Q7L099 469 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms