RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 LLPHQ9BRT6 129 aaKnown RBP17.12■□□□□ 0.33
SSBP3-201ENST00000326956 TRMT1Q9NXH9 659 aaKnown RBP17.12■□□□□ 0.33
SSBP3-201ENST00000326956 USP16Q9Y5T5 823 aa17.12■□□□□ 0.33
SSBP3-201ENST00000326956 KIF13AQ9H1H9 1805 aa17.11■□□□□ 0.33
SSBP3-201ENST00000326956 UTYO14607 1347 aa17.11■□□□□ 0.33
SSBP3-201ENST00000326956 HMGB1P09429 215 aaKnown RBP17.11■□□□□ 0.33
SSBP3-201ENST00000326956 MYL6BP14649 208 aa17.11■□□□□ 0.33
SSBP3-201ENST00000326956 SCRN1Q12765 414 aa17.11■□□□□ 0.33
SSBP3-201ENST00000326956 MCMDC2Q4G0Z9 681 aa17.11■□□□□ 0.33
SSBP3-201ENST00000326956 THEMISQ8N1K5 641 aaPredicted RBP17.11■□□□□ 0.33
SSBP3-201ENST00000326956 SDF4Q9BRK5 362 aa17.11■□□□□ 0.33
SSBP3-201ENST00000326956 ARID5BQ14865 1188 aa17.1■□□□□ 0.33
SSBP3-201ENST00000326956 NAA16Q6N069 864 aaPredicted RBP17.1■□□□□ 0.33
SSBP3-201ENST00000326956 FSIP1Q8NA03 581 aa17.1■□□□□ 0.33
SSBP3-201ENST00000326956 KIF18AQ8NI77 898 aa17.1■□□□□ 0.33
SSBP3-201ENST00000326956 MYD88Q99836 296 aa17.1■□□□□ 0.33
SSBP3-201ENST00000326956 RCOR1Q9UKL0 485 aa17.1■□□□□ 0.33
SSBP3-201ENST00000326956 CCDC9Q9Y3X0 531 aaKnown RBP17.1■□□□□ 0.33
SSBP3-201ENST00000326956 NDUFB9Q9Y6M9 179 aa17.1■□□□□ 0.33
SSBP3-201ENST00000326956 MED1Q15648 1581 aaPredicted RBP17.1■□□□□ 0.33
SSBP3-201ENST00000326956 NRDCO43847 1150 aa17.1■□□□□ 0.33
SSBP3-201ENST00000326956 CYP21A2P08686 494 aa17.1■□□□□ 0.33
SSBP3-201ENST00000326956 KDM3BQ7LBC6 1761 aa17.1■□□□□ 0.33
SSBP3-201ENST00000326956 PTPDC1A2A3K4 754 aa17.09■□□□□ 0.33
SSBP3-201ENST00000326956 RBM6P78332 1123 aaKnown RBP17.09■□□□□ 0.33
SSBP3-201ENST00000326956 CCT2P78371 535 aaKnown RBP17.09■□□□□ 0.33
SSBP3-201ENST00000326956 FAM160A1Q05DH4 1040 aa17.09■□□□□ 0.33
SSBP3-201ENST00000326956 AOPEPQ8N6M6 819 aa17.09■□□□□ 0.33
SSBP3-201ENST00000326956 ZNF397Q8NF99 534 aaPredicted RBP17.09■□□□□ 0.33
SSBP3-201ENST00000326956 SEC62Q99442 399 aaKnown RBP17.09■□□□□ 0.33
SSBP3-201ENST00000326956 DBNLQ9UJU6 430 aaKnown RBP17.09■□□□□ 0.33
SSBP3-201ENST00000326956 PFKFB2O60825 505 aa17.09■□□□□ 0.33
SSBP3-201ENST00000326956 IGKV5-2P06315 115 aa17.09■□□□□ 0.33
SSBP3-201ENST00000326956 GSDMDP57764 484 aa17.09■□□□□ 0.33
SSBP3-201ENST00000326956 TFCP2Q12800 502 aa17.09■□□□□ 0.33
SSBP3-201ENST00000326956 TNNI3KQ59H18 835 aa17.09■□□□□ 0.33
SSBP3-201ENST00000326956 FTOQ9C0B1 505 aaKnown RBP eCLIP17.09■□□□□ 0.33
SSBP3-201ENST00000326956 DDX41Q9UJV9 622 aaKnown RBP17.09■□□□□ 0.33
SSBP3-201ENST00000326956 FPGT-TNNI3KV9GXZ4 949 aa17.09■□□□□ 0.33
SSBP3-201ENST00000326956 SLIT1O75093 1534 aa17.08■□□□□ 0.33
SSBP3-201ENST00000326956 USP27XA6NNY8 438 aa17.08■□□□□ 0.33
SSBP3-201ENST00000326956 KIF2AO00139 706 aaPredicted RBP17.08■□□□□ 0.33
SSBP3-201ENST00000326956 GABPB1Q06547 395 aaPredicted RBP17.08■□□□□ 0.33
SSBP3-201ENST00000326956 GCKRQ14397 625 aa17.08■□□□□ 0.33
SSBP3-201ENST00000326956 SF3A1Q15459 793 aaKnown RBP17.08■□□□□ 0.33
SSBP3-201ENST00000326956 ATL3Q6DD88 541 aa17.08■□□□□ 0.33
SSBP3-201ENST00000326956 LMOD2Q6P5Q4 547 aa17.08■□□□□ 0.33
SSBP3-201ENST00000326956 DDX46Q7L014 1031 aaKnown RBP17.08■□□□□ 0.33
SSBP3-201ENST00000326956 DHX32Q7L7V1 743 aaKnown RBP17.08■□□□□ 0.33
SSBP3-201ENST00000326956 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.08■□□□□ 0.33
SSBP3-201ENST00000326956 ZNF215Q9UL58 517 aaPredicted RBP17.08■□□□□ 0.33
SSBP3-201ENST00000326956 V9GYY5 206 aaPredicted RBP17.08■□□□□ 0.33
SSBP3-201ENST00000326956 JCADQ9P266 1359 aa17.08■□□□□ 0.32
SSBP3-201ENST00000326956 NEURL1BA8MQ27 555 aa17.08■□□□□ 0.32
SSBP3-201ENST00000326956 GUCY1B3Q02153 619 aa17.08■□□□□ 0.32
SSBP3-201ENST00000326956 APOBRQ0VD83 1088 aa17.08■□□□□ 0.32
SSBP3-201ENST00000326956 SMARCC2Q8TAQ2 1214 aa17.08■□□□□ 0.32
SSBP3-201ENST00000326956 CHMP4CQ96CF2 233 aa17.08■□□□□ 0.32
SSBP3-201ENST00000326956 USP28Q96RU2 1077 aa17.08■□□□□ 0.32
SSBP3-201ENST00000326956 NSUN7Q8NE18 718 aaKnown RBP17.07■□□□□ 0.32
SSBP3-201ENST00000326956 GOLPH3LQ9H4A5 285 aa17.07■□□□□ 0.32
SSBP3-201ENST00000326956 NCAPD2Q15021 1401 aa17.07■□□□□ 0.32
SSBP3-201ENST00000326956 XAGE3Q8WTP9 111 aa17.07■□□□□ 0.32
SSBP3-201ENST00000326956 A0A087WWV3 80 aa17.07■□□□□ 0.32
SSBP3-201ENST00000326956 TPM4P67936 248 aa17.07■□□□□ 0.32
SSBP3-201ENST00000326956 EPHA10Q5JZY3 1008 aa17.07■□□□□ 0.32
SSBP3-201ENST00000326956 KRT222Q8N1A0 295 aa17.07■□□□□ 0.32
SSBP3-201ENST00000326956 ERO1AQ96HE7 468 aa17.07■□□□□ 0.32
SSBP3-201ENST00000326956 COPRSQ9NQ92 184 aa17.07■□□□□ 0.32
SSBP3-201ENST00000326956 PPFIA3O75145 1194 aa17.06■□□□□ 0.32
SSBP3-201ENST00000326956 COPS6Q7L5N1 327 aa17.06■□□□□ 0.32
SSBP3-201ENST00000326956 SMC2O95347 1197 aa17.06■□□□□ 0.32
SSBP3-201ENST00000326956 ESCO1Q5FWF5 840 aa17.06■□□□□ 0.32
SSBP3-201ENST00000326956 CCAR2Q8N163 923 aaKnown RBP17.06■□□□□ 0.32
SSBP3-201ENST00000326956 MRPS27Q92552 414 aaKnown RBP17.06■□□□□ 0.32
SSBP3-201ENST00000326956 DBNDD2Q9BQY9 259 aa17.06■□□□□ 0.32
SSBP3-201ENST00000326956 SLU7O95391 586 aaKnown RBP17.05■□□□□ 0.32
SSBP3-201ENST00000326956 ADD1P35611 737 aaKnown RBP17.05■□□□□ 0.32
SSBP3-201ENST00000326956 NYAP1Q6ZVC0 841 aa17.05■□□□□ 0.32
SSBP3-201ENST00000326956 DHX40Q8IX18 779 aaKnown RBP17.05■□□□□ 0.32
SSBP3-201ENST00000326956 METTL22Q9BUU2 404 aaPredicted RBP17.05■□□□□ 0.32
SSBP3-201ENST00000326956 MORC2Q9Y6X9 1032 aaPredicted RBP17.05■□□□□ 0.32
SSBP3-201ENST00000326956 LTN1O94822 1766 aa17.05■□□□□ 0.32
SSBP3-201ENST00000326956 ERCC4Q92889 916 aaPredicted RBP17.05■□□□□ 0.32
SSBP3-201ENST00000326956 NEUROD6Q96NK8 337 aa17.05■□□□□ 0.32
SSBP3-201ENST00000326956 ZNF609O15014 1411 aa17.05■□□□□ 0.32
SSBP3-201ENST00000326956 NPHP1O15259 732 aa17.04■□□□□ 0.32
SSBP3-201ENST00000326956 CCZ1BP86790 482 aa17.04■□□□□ 0.32
SSBP3-201ENST00000326956 CCZ1P86791 482 aaPredicted RBP17.04■□□□□ 0.32
SSBP3-201ENST00000326956 SLC39A6Q13433 755 aa17.04■□□□□ 0.32
SSBP3-201ENST00000326956 SNW1Q13573 536 aaKnown RBP17.04■□□□□ 0.32
SSBP3-201ENST00000326956 ANKRD24Q8TF21 1146 aa17.04■□□□□ 0.32
SSBP3-201ENST00000326956 HAUS7Q99871 368 aa17.04■□□□□ 0.32
SSBP3-201ENST00000326956 COL15A1P39059 1388 aa17.04■□□□□ 0.32
SSBP3-201ENST00000326956 CHGBP05060 677 aa17.04■□□□□ 0.32
SSBP3-201ENST00000326956 STK38Q15208 465 aa17.04■□□□□ 0.32
SSBP3-201ENST00000326956 UBE3BQ7Z3V4 1068 aa17.04■□□□□ 0.32
SSBP3-201ENST00000326956 NCOA5Q9HCD5 579 aaKnown RBP17.04■□□□□ 0.32
SSBP3-201ENST00000326956 RFX7Q2KHR2 1363 aa17.04■□□□□ 0.32
SSBP3-201ENST00000326956 ELF2Q15723 593 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms