RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 IRX5P78411 483 aaPredicted RBP16.7■□□□□ 0.26
CHRNA3-201ENST00000326828 GJB4Q9NTQ9 266 aa16.7■□□□□ 0.26
CHRNA3-201ENST00000326828 HIP1O00291 1037 aa16.7■□□□□ 0.26
CHRNA3-201ENST00000326828 SEC31AO94979 1220 aaKnown RBP16.7■□□□□ 0.26
CHRNA3-201ENST00000326828 CYP21A2P08686 494 aa16.7■□□□□ 0.26
CHRNA3-201ENST00000326828 URI1O94763 535 aaPredicted RBP16.69■□□□□ 0.26
CHRNA3-201ENST00000326828 SFPQP23246 707 aaKnown RBP eCLIP16.69■□□□□ 0.26
CHRNA3-201ENST00000326828 GNL2Q13823 731 aaKnown RBP16.69■□□□□ 0.26
CHRNA3-201ENST00000326828 E4F1Q66K89 784 aaPredicted RBP16.69■□□□□ 0.26
CHRNA3-201ENST00000326828 RIC3Q7Z5B4 369 aa16.69■□□□□ 0.26
CHRNA3-201ENST00000326828 DBF4Q9UBU7 674 aaPredicted RBP16.69■□□□□ 0.26
CHRNA3-201ENST00000326828 KDRP35968 1356 aa16.69■□□□□ 0.26
CHRNA3-201ENST00000326828 GRM8O00222 908 aa16.69■□□□□ 0.26
CHRNA3-201ENST00000326828 HDGFP51858 240 aaKnown RBP16.69■□□□□ 0.26
CHRNA3-201ENST00000326828 NBPF6Q5VWK0 638 aa16.69■□□□□ 0.26
CHRNA3-201ENST00000326828 KCNB2Q92953 911 aa16.69■□□□□ 0.26
CHRNA3-201ENST00000326828 NBPF4Q96M43 638 aa16.69■□□□□ 0.26
CHRNA3-201ENST00000326828 TIGD1Q96MW7 591 aa16.69■□□□□ 0.26
CHRNA3-201ENST00000326828 CLCN6P51797 869 aa16.68■□□□□ 0.26
CHRNA3-201ENST00000326828 NEK11Q8NG66 645 aa16.68■□□□□ 0.26
CHRNA3-201ENST00000326828 STK11IPQ8N1F8 1099 aa16.68■□□□□ 0.26
CHRNA3-201ENST00000326828 PPP1R13BQ96KQ4 1090 aa16.68■□□□□ 0.26
CHRNA3-201ENST00000326828 ZCCHC17Q9NP64 241 aaKnown RBP16.68■□□□□ 0.26
CHRNA3-201ENST00000326828 AMOTL2Q9Y2J4 779 aa16.68■□□□□ 0.26
CHRNA3-201ENST00000326828 LTKP29376 864 aa16.68■□□□□ 0.26
CHRNA3-201ENST00000326828 KAZALD1Q96I82 304 aa16.68■□□□□ 0.26
CHRNA3-201ENST00000326828 GPHNQ9NQX3 736 aaPredicted RBP16.68■□□□□ 0.26
CHRNA3-201ENST00000326828 USP42Q9H9J4 1324 aaKnown RBP16.67■□□□□ 0.26
CHRNA3-201ENST00000326828 C3P01024 1663 aa16.67■□□□□ 0.26
CHRNA3-201ENST00000326828 TAF3Q5VWG9 929 aa16.67■□□□□ 0.26
CHRNA3-201ENST00000326828 MNS1Q8NEH6 495 aa16.67■□□□□ 0.26
CHRNA3-201ENST00000326828 NEUROD6Q96NK8 337 aa16.67■□□□□ 0.26
CHRNA3-201ENST00000326828 ERBB3P21860 1342 aa16.67■□□□□ 0.26
CHRNA3-201ENST00000326828 NEMFO60524 1076 aa16.67■□□□□ 0.26
CHRNA3-201ENST00000326828 NPHP4O75161 1426 aaPredicted RBP16.67■□□□□ 0.26
CHRNA3-201ENST00000326828 NDUFA8P51970 172 aa16.67■□□□□ 0.26
CHRNA3-201ENST00000326828 ARMCX5Q6P1M9 558 aa16.67■□□□□ 0.26
CHRNA3-201ENST00000326828 NBPF11Q86T75 865 aa16.67■□□□□ 0.26
CHRNA3-201ENST00000326828 XRN1Q8IZH2 1706 aaKnown RBP16.67■□□□□ 0.26
CHRNA3-201ENST00000326828 CCDC34Q96HJ3 373 aa16.67■□□□□ 0.26
CHRNA3-201ENST00000326828 ZSCAN16Q9H4T2 348 aaPredicted RBP16.67■□□□□ 0.26
CHRNA3-201ENST00000326828 RIMBP3CA6NJZ7 1639 aa16.67■□□□□ 0.26
CHRNA3-201ENST00000326828 RIMBP3BA6NNM3 1639 aa16.67■□□□□ 0.26
CHRNA3-201ENST00000326828 RIMBP3Q9UFD9 1639 aa16.67■□□□□ 0.26
CHRNA3-201ENST00000326828 FAM160A1Q05DH4 1040 aa16.66■□□□□ 0.26
CHRNA3-201ENST00000326828 STK38Q15208 465 aa16.66■□□□□ 0.26
CHRNA3-201ENST00000326828 EPHA10Q5JZY3 1008 aa16.66■□□□□ 0.26
CHRNA3-201ENST00000326828 KSR2Q6VAB6 950 aa16.66■□□□□ 0.26
CHRNA3-201ENST00000326828 UBXN4Q92575 508 aa16.66■□□□□ 0.26
CHRNA3-201ENST00000326828 CDC25BP30305 580 aa16.66■□□□□ 0.26
CHRNA3-201ENST00000326828 SLC39A6Q13433 755 aa16.66■□□□□ 0.26
CHRNA3-201ENST00000326828 STOX1Q6ZVD7 989 aa16.66■□□□□ 0.26
CHRNA3-201ENST00000326828 NAT10Q9H0A0 1025 aaKnown RBP16.66■□□□□ 0.26
CHRNA3-201ENST00000326828 USP31Q70CQ4 1352 aa16.66■□□□□ 0.26
CHRNA3-201ENST00000326828 ATP1A3P13637 1013 aa16.66■□□□□ 0.26
CHRNA3-201ENST00000326828 ADD1P35611 737 aaKnown RBP16.66■□□□□ 0.26
CHRNA3-201ENST00000326828 CEBPAP49715 358 aaPredicted RBP16.66■□□□□ 0.26
CHRNA3-201ENST00000326828 TFCP2Q12800 502 aa16.66■□□□□ 0.26
CHRNA3-201ENST00000326828 SARM1Q6SZW1 724 aa16.66■□□□□ 0.26
CHRNA3-201ENST00000326828 PCDHA7Q9UN72 937 aa16.66■□□□□ 0.26
CHRNA3-201ENST00000326828 COL15A1P39059 1388 aa16.65■□□□□ 0.26
CHRNA3-201ENST00000326828 BMS1Q14692 1282 aaKnown RBP16.65■□□□□ 0.26
CHRNA3-201ENST00000326828 NSUN7Q8NE18 718 aaKnown RBP16.65■□□□□ 0.26
CHRNA3-201ENST00000326828 ZSWIM4Q9H7M6 989 aa16.65■□□□□ 0.26
CHRNA3-201ENST00000326828 GYS2P54840 703 aa16.65■□□□□ 0.26
CHRNA3-201ENST00000326828 HAND2P61296 217 aa16.65■□□□□ 0.26
CHRNA3-201ENST00000326828 DBNDD2Q9BQY9 259 aa16.65■□□□□ 0.26
CHRNA3-201ENST00000326828 DBNLQ9UJU6 430 aaKnown RBP16.65■□□□□ 0.26
CHRNA3-201ENST00000326828 ITSN1Q15811 1721 aa16.65■□□□□ 0.26
CHRNA3-201ENST00000326828 NEO1Q92859 1461 aa16.65■□□□□ 0.26
CHRNA3-201ENST00000326828 NRKQ7Z2Y5 1582 aa16.65■□□□□ 0.26
CHRNA3-201ENST00000326828 MON2Q7Z3U7 1717 aa16.64■□□□□ 0.26
CHRNA3-201ENST00000326828 HMG20BQ9P0W2 317 aa16.64■□□□□ 0.26
CHRNA3-201ENST00000326828 CTAGE5O15320 804 aa16.64■□□□□ 0.25
CHRNA3-201ENST00000326828 CTDNEP1O95476 244 aa16.64■□□□□ 0.25
CHRNA3-201ENST00000326828 MARCKSP29966 332 aaPredicted RBP16.64■□□□□ 0.25
CHRNA3-201ENST00000326828 HNRNPH2P55795 449 aaKnown RBP16.64■□□□□ 0.25
CHRNA3-201ENST00000326828 MYD88Q99836 296 aa16.64■□□□□ 0.25
CHRNA3-201ENST00000326828 CARD6Q9BX69 1037 aa16.64■□□□□ 0.25
CHRNA3-201ENST00000326828 CLIC4Q9Y696 253 aa16.64■□□□□ 0.25
CHRNA3-201ENST00000326828 KRT32Q14532 448 aa16.64■□□□□ 0.25
CHRNA3-201ENST00000326828 MRPS27Q92552 414 aaKnown RBP16.64■□□□□ 0.25
CHRNA3-201ENST00000326828 UTP14AQ9BVJ6 771 aaKnown RBP16.64■□□□□ 0.25
CHRNA3-201ENST00000326828 CHMP4AQ9BY43 222 aa16.64■□□□□ 0.25
CHRNA3-201ENST00000326828 RCOR1Q9UKL0 485 aa16.64■□□□□ 0.25
CHRNA3-201ENST00000326828 ATP5J2-PTCD1G3V325 749 aa16.63■□□□□ 0.25
CHRNA3-201ENST00000326828 GOLIM4O00461 696 aa16.63■□□□□ 0.25
CHRNA3-201ENST00000326828 PTCD1O75127 700 aaKnown RBP16.63■□□□□ 0.25
CHRNA3-201ENST00000326828 CAVIN2O95810 425 aa16.63■□□□□ 0.25
CHRNA3-201ENST00000326828 PNMA6AP0CW24 399 aaPredicted RBP16.63■□□□□ 0.25
CHRNA3-201ENST00000326828 TMCO3Q6UWJ1 677 aa16.63■□□□□ 0.25
CHRNA3-201ENST00000326828 ZNF396Q96N95 335 aaPredicted RBP16.63■□□□□ 0.25
CHRNA3-201ENST00000326828 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.63■□□□□ 0.25
CHRNA3-201ENST00000326828 SERPINC1P01008 464 aa16.63■□□□□ 0.25
CHRNA3-201ENST00000326828 PDILTQ8N807 584 aa16.63■□□□□ 0.25
CHRNA3-201ENST00000326828 NRDCO43847 1150 aa16.62■□□□□ 0.25
CHRNA3-201ENST00000326828 GSDMDP57764 484 aa16.62■□□□□ 0.25
CHRNA3-201ENST00000326828 MTX1Q13505 466 aa16.62■□□□□ 0.25
CHRNA3-201ENST00000326828 C1orf141Q5JVX7 400 aa16.62■□□□□ 0.25
CHRNA3-201ENST00000326828 TTLL5Q6EMB2 1281 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms