RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 ORC3Q9UBD5 711 aaPredicted RBP19.14■□□□□ 0.65
SMCHD1-201ENST00000320876 CFAP157Q5JU67 520 aa19.14■□□□□ 0.65
SMCHD1-201ENST00000320876 CACNA2D3Q8IZS8 1091 aa19.14■□□□□ 0.65
SMCHD1-201ENST00000320876 EIF2AK4Q9P2K8 1649 aaKnown RBP19.14■□□□□ 0.65
SMCHD1-201ENST00000320876 MRPS27Q92552 414 aaKnown RBP19.14■□□□□ 0.65
SMCHD1-201ENST00000320876 NBPF7P0C2Y1 421 aaPredicted RBP19.13■□□□□ 0.65
SMCHD1-201ENST00000320876 SF3B2Q13435 895 aaKnown RBP19.13■□□□□ 0.65
SMCHD1-201ENST00000320876 C20orf194Q5TEA3 1177 aa19.13■□□□□ 0.65
SMCHD1-201ENST00000320876 USP48Q86UV5 1035 aa19.13■□□□□ 0.65
SMCHD1-201ENST00000320876 C10orf67Q8IYJ2 551 aa19.13■□□□□ 0.65
SMCHD1-201ENST00000320876 ECHDC1Q9NTX5 307 aa19.13■□□□□ 0.65
SMCHD1-201ENST00000320876 RAD54L2Q9Y4B4 1467 aa19.13■□□□□ 0.65
SMCHD1-201ENST00000320876 ZPR1O75312 459 aa19.13■□□□□ 0.65
SMCHD1-201ENST00000320876 GMNNO75496 209 aa19.13■□□□□ 0.65
SMCHD1-201ENST00000320876 SMAP1Q8IYB5 467 aaPredicted RBP19.13■□□□□ 0.65
SMCHD1-201ENST00000320876 MCM10Q7L590 875 aa19.13■□□□□ 0.65
SMCHD1-201ENST00000320876 POTEDQ86YR6 584 aa19.13■□□□□ 0.65
SMCHD1-201ENST00000320876 VCX3BQ9H321 246 aa19.13■□□□□ 0.65
SMCHD1-201ENST00000320876 AOPEPQ8N6M6 819 aa19.13■□□□□ 0.65
SMCHD1-201ENST00000320876 PPFIBP2Q8ND30 876 aa19.13■□□□□ 0.65
SMCHD1-201ENST00000320876 AMOTQ4VCS5 1084 aa19.13■□□□□ 0.65
SMCHD1-201ENST00000320876 RPUSD2Q8IZ73 545 aaKnown RBP19.13■□□□□ 0.65
SMCHD1-201ENST00000320876 MPHOSPH6Q99547 160 aaKnown RBP19.13■□□□□ 0.65
SMCHD1-201ENST00000320876 SLC52A1Q9NWF4 448 aa19.13■□□□□ 0.65
SMCHD1-201ENST00000320876 LUC7L2Q9Y383 392 aaKnown RBP19.12■□□□□ 0.65
SMCHD1-201ENST00000320876 XRCC6P12956 609 aaKnown RBP eCLIP19.12■□□□□ 0.65
SMCHD1-201ENST00000320876 TXNDC16Q9P2K2 825 aa19.12■□□□□ 0.65
SMCHD1-201ENST00000320876 CAPZA3Q96KX2 299 aa19.12■□□□□ 0.65
SMCHD1-201ENST00000320876 SEC62Q99442 399 aaKnown RBP19.12■□□□□ 0.65
SMCHD1-201ENST00000320876 MIS18AQ9NYP9 233 aa19.12■□□□□ 0.65
SMCHD1-201ENST00000320876 IGF1RP08069 1367 aa19.12■□□□□ 0.65
SMCHD1-201ENST00000320876 PTGS1P23219 599 aa19.12■□□□□ 0.65
SMCHD1-201ENST00000320876 KRT23Q9C075 422 aa19.11■□□□□ 0.65
SMCHD1-201ENST00000320876 LMNTD2Q8IXW0 634 aa19.11■□□□□ 0.65
SMCHD1-201ENST00000320876 TNNC1P63316 161 aa19.11■□□□□ 0.65
SMCHD1-201ENST00000320876 KRBA2Q6ZNG9 492 aa19.11■□□□□ 0.65
SMCHD1-201ENST00000320876 KCNH5Q8NCM2 988 aa19.11■□□□□ 0.65
SMCHD1-201ENST00000320876 NDC80O14777 642 aa19.11■□□□□ 0.65
SMCHD1-201ENST00000320876 PANK2Q9BZ23 570 aa19.11■□□□□ 0.65
SMCHD1-201ENST00000320876 INTS8Q75QN2 995 aaKnown RBP19.11■□□□□ 0.65
SMCHD1-201ENST00000320876 CCDC186Q7Z3E2 898 aa19.11■□□□□ 0.65
SMCHD1-201ENST00000320876 AFAP1L1Q8TED9 768 aa19.11■□□□□ 0.65
SMCHD1-201ENST00000320876 MYD88Q99836 296 aa19.11■□□□□ 0.65
SMCHD1-201ENST00000320876 NSD2O96028 1365 aa19.11■□□□□ 0.65
SMCHD1-201ENST00000320876 TYRO3Q06418 890 aa19.11■□□□□ 0.65
SMCHD1-201ENST00000320876 CCDC42Q96M95 316 aa19.1■□□□□ 0.65
SMCHD1-201ENST00000320876 BUB1BO60566 1050 aaPredicted RBP19.1■□□□□ 0.65
SMCHD1-201ENST00000320876 BAG3O95817 575 aa19.1■□□□□ 0.65
SMCHD1-201ENST00000320876 SARNPP82979 210 aaKnown RBP19.1■□□□□ 0.65
SMCHD1-201ENST00000320876 NUCB1Q02818 461 aa19.1■□□□□ 0.65
SMCHD1-201ENST00000320876 UBXN1Q04323 297 aa19.1■□□□□ 0.65
SMCHD1-201ENST00000320876 TMX3Q96JJ7 454 aa19.1■□□□□ 0.65
SMCHD1-201ENST00000320876 FAM184BQ9ULE4 1060 aa19.1■□□□□ 0.65
SMCHD1-201ENST00000320876 SETD1BQ9UPS6 1966 aaKnown RBP19.1■□□□□ 0.65
SMCHD1-201ENST00000320876 AFMP43652 599 aa19.1■□□□□ 0.65
SMCHD1-201ENST00000320876 CEP120Q8N960 986 aa19.1■□□□□ 0.65
SMCHD1-201ENST00000320876 UTP14AQ9BVJ6 771 aaKnown RBP19.1■□□□□ 0.65
SMCHD1-201ENST00000320876 PPP1R7Q15435 360 aa19.1■□□□□ 0.65
SMCHD1-201ENST00000320876 CNNM2Q9H8M5 875 aa19.1■□□□□ 0.65
SMCHD1-201ENST00000320876 TMTC2Q8N394 836 aa19.09■□□□□ 0.65
SMCHD1-201ENST00000320876 CNGA4Q8IV77 575 aa19.09■□□□□ 0.65
SMCHD1-201ENST00000320876 IFT81Q8WYA0 676 aa19.09■□□□□ 0.65
SMCHD1-201ENST00000320876 MMRN2Q9H8L6 949 aa19.09■□□□□ 0.65
SMCHD1-201ENST00000320876 ERCC6LQ2NKX8 1250 aa19.09■□□□□ 0.65
SMCHD1-201ENST00000320876 TSNAXIP1Q2TAA8 658 aa19.09■□□□□ 0.65
SMCHD1-201ENST00000320876 FYB2Q5VWT5 728 aa19.09■□□□□ 0.65
SMCHD1-201ENST00000320876 LARP6Q9BRS8 491 aaKnown RBP19.09■□□□□ 0.65
SMCHD1-201ENST00000320876 CCDC8Q9H0W5 538 aaPredicted RBP19.09■□□□□ 0.65
SMCHD1-201ENST00000320876 WDHD1O75717 1129 aaPredicted RBP19.09■□□□□ 0.65
SMCHD1-201ENST00000320876 TMOD3Q9NYL9 352 aa19.09■□□□□ 0.65
SMCHD1-201ENST00000320876 PIK3R4Q99570 1358 aa19.09■□□□□ 0.65
SMCHD1-201ENST00000320876 UBLCP1Q8WVY7 318 aaPredicted RBP19.08■□□□□ 0.65
SMCHD1-201ENST00000320876 NKIRAS1Q9NYS0 192 aa19.08■□□□□ 0.65
SMCHD1-201ENST00000320876 GUCA1BQ9UMX6 200 aa19.08■□□□□ 0.65
SMCHD1-201ENST00000320876 CHMP4BP1P59074 171 aa19.08■□□□□ 0.65
SMCHD1-201ENST00000320876 NBPF8Q3BBV2 869 aa19.08■□□□□ 0.65
SMCHD1-201ENST00000320876 DBF4Q9UBU7 674 aaPredicted RBP19.08■□□□□ 0.65
SMCHD1-201ENST00000320876 GRIN2BQ13224 1484 aa19.08■□□□□ 0.65
SMCHD1-201ENST00000320876 GPR161Q8N6U8 529 aaKnown RBP19.08■□□□□ 0.65
SMCHD1-201ENST00000320876 NEK11Q8NG66 645 aa19.08■□□□□ 0.65
SMCHD1-201ENST00000320876 FAM69CQ0P6D2 419 aa19.08■□□□□ 0.64
SMCHD1-201ENST00000320876 PROSER2Q86WR7 435 aaPredicted RBP19.08■□□□□ 0.64
SMCHD1-201ENST00000320876 TSPY2A6NKD2 308 aa19.08■□□□□ 0.64
SMCHD1-201ENST00000320876 TMEM87AQ8NBN3 555 aa19.08■□□□□ 0.64
SMCHD1-201ENST00000320876 PRDM11Q9NQV5 511 aa19.08■□□□□ 0.64
SMCHD1-201ENST00000320876 IMPG2Q9BZV3 1241 aa19.08■□□□□ 0.64
SMCHD1-201ENST00000320876 PCK1P35558 622 aa19.08■□□□□ 0.64
SMCHD1-201ENST00000320876 CEP85LQ5SZL2 805 aa19.08■□□□□ 0.64
SMCHD1-201ENST00000320876 PHF23Q9BUL5 403 aaPredicted RBP19.08■□□□□ 0.64
SMCHD1-201ENST00000320876 SNX16P57768 344 aa19.07■□□□□ 0.64
SMCHD1-201ENST00000320876 WTAPQ15007 396 aa19.07■□□□□ 0.64
SMCHD1-201ENST00000320876 FEZ2Q9UHY8 353 aaPredicted RBP19.07■□□□□ 0.64
SMCHD1-201ENST00000320876 TUBB2AQ13885 445 aa19.07■□□□□ 0.64
SMCHD1-201ENST00000320876 SNX21Q969T3 373 aa19.07■□□□□ 0.64
SMCHD1-201ENST00000320876 TUBB2BQ9BVA1 445 aa19.07■□□□□ 0.64
SMCHD1-201ENST00000320876 KCNK9Q9NPC2 374 aa19.07■□□□□ 0.64
SMCHD1-201ENST00000320876 RHOXF2BP0C7M4 288 aa19.07■□□□□ 0.64
SMCHD1-201ENST00000320876 BICDL1Q6ZP65 573 aa19.07■□□□□ 0.64
SMCHD1-201ENST00000320876 RHOXF2Q9BQY4 288 aa19.07■□□□□ 0.64
SMCHD1-201ENST00000320876 EEF2P13639 858 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms