RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 LRRC37AA6NMS7 1700 aa17.45■□□□□ 0.38
SYCN-201ENST00000318438 VIL1P09327 827 aaKnown RBP17.45■□□□□ 0.38
SYCN-201ENST00000318438 GPSM2P81274 684 aa17.45■□□□□ 0.38
SYCN-201ENST00000318438 SREBF2Q12772 1141 aa17.45■□□□□ 0.38
SYCN-201ENST00000318438 THUMPD2Q9BTF0 503 aaKnown RBP17.45■□□□□ 0.38
SYCN-201ENST00000318438 CFHR5Q9BXR6 569 aa17.45■□□□□ 0.38
SYCN-201ENST00000318438 COL6A3P12111 3177 aa17.45■□□□□ 0.38
SYCN-201ENST00000318438 EIF4A1P60842 406 aaKnown RBP17.44■□□□□ 0.38
SYCN-201ENST00000318438 TTLL12Q14166 644 aaPredicted RBP17.44■□□□□ 0.38
SYCN-201ENST00000318438 TMC4Q7Z404 712 aa17.44■□□□□ 0.38
SYCN-201ENST00000318438 SLC17A8Q8NDX2 589 aa17.44■□□□□ 0.38
SYCN-201ENST00000318438 ZNF428Q96B54 188 aa17.44■□□□□ 0.38
SYCN-201ENST00000318438 ANKRD36CQ5JPF3 1778 aa17.43■□□□□ 0.38
SYCN-201ENST00000318438 CEP290O15078 2479 aa17.43■□□□□ 0.38
SYCN-201ENST00000318438 KIAA0100Q14667 2235 aaKnown RBP17.43■□□□□ 0.38
SYCN-201ENST00000318438 ZNF280AP59817 542 aaPredicted RBP17.43■□□□□ 0.38
SYCN-201ENST00000318438 NLRP10Q86W26 655 aa17.43■□□□□ 0.38
SYCN-201ENST00000318438 HTATSF1O43719 755 aaKnown RBP17.42■□□□□ 0.38
SYCN-201ENST00000318438 LRP10Q7Z4F1 713 aa17.42■□□□□ 0.38
SYCN-201ENST00000318438 CELF1Q92879 486 aaKnown RBP17.42■□□□□ 0.38
SYCN-201ENST00000318438 TRMT112Q9UI30 125 aaKnown RBP17.42■□□□□ 0.38
SYCN-201ENST00000318438 SCN9AQ15858 1988 aa17.41■□□□□ 0.38
SYCN-201ENST00000318438 CUL9Q8IWT3 2517 aa17.41■□□□□ 0.38
SYCN-201ENST00000318438 H0YGN5 161 aa17.41■□□□□ 0.38
SYCN-201ENST00000318438 EYA3Q99504 573 aa17.41■□□□□ 0.38
SYCN-201ENST00000318438 COL4A1P02462 1669 aa17.41■□□□□ 0.38
SYCN-201ENST00000318438 PITPNM2Q9BZ72 1349 aa17.41■□□□□ 0.38
SYCN-201ENST00000318438 RBBP6Q7Z6E9 1792 aaKnown RBP17.4■□□□□ 0.38
SYCN-201ENST00000318438 U2AF1L5P0DN76 240 aaPredicted RBP17.4■□□□□ 0.38
SYCN-201ENST00000318438 U2AF1Q01081 240 aaKnown RBP eCLIP17.4■□□□□ 0.38
SYCN-201ENST00000318438 TBC1D16Q8TBP0 767 aa17.4■□□□□ 0.38
SYCN-201ENST00000318438 OTUD5Q96G74 571 aa17.4■□□□□ 0.38
SYCN-201ENST00000318438 MYOZ2Q9NPC6 264 aa17.4■□□□□ 0.38
SYCN-201ENST00000318438 PTPN22Q9Y2R2 807 aa17.4■□□□□ 0.38
SYCN-201ENST00000318438 DLG5Q8TDM6 1919 aa17.4■□□□□ 0.38
SYCN-201ENST00000318438 SH3TC1Q8TE82 1336 aa17.4■□□□□ 0.38
SYCN-201ENST00000318438 DDX60Q8IY21 1712 aaKnown RBP17.39■□□□□ 0.37
SYCN-201ENST00000318438 KDM3BQ7LBC6 1761 aa17.39■□□□□ 0.37
SYCN-201ENST00000318438 ANXA1P04083 346 aa17.39■□□□□ 0.37
SYCN-201ENST00000318438 PTPN12Q05209 780 aaKnown RBP17.39■□□□□ 0.37
SYCN-201ENST00000318438 PDIA6Q15084 440 aa17.39■□□□□ 0.37
SYCN-201ENST00000318438 PROSER3Q2NL68 480 aa17.39■□□□□ 0.37
SYCN-201ENST00000318438 RSBN1LQ6PCB5 846 aaPredicted RBP17.39■□□□□ 0.37
SYCN-201ENST00000318438 ARMC5Q96C12 935 aa17.39■□□□□ 0.37
SYCN-201ENST00000318438 PRKG1Q13976 671 aa17.38■□□□□ 0.37
SYCN-201ENST00000318438 CHRDL2Q6WN34 429 aa17.38■□□□□ 0.37
SYCN-201ENST00000318438 AGBL3Q8NEM8 1001 aa17.38■□□□□ 0.37
SYCN-201ENST00000318438 PNISRQ8TF01 805 aaKnown RBP17.38■□□□□ 0.37
SYCN-201ENST00000318438 ZC3H12CQ9C0D7 883 aaKnown RBP17.38■□□□□ 0.37
SYCN-201ENST00000318438 ERBB4Q15303 1308 aa17.38■□□□□ 0.37
SYCN-201ENST00000318438 G3V3G9 751 aa17.37■□□□□ 0.37
SYCN-201ENST00000318438 ALDH1A1P00352 501 aa17.37■□□□□ 0.37
SYCN-201ENST00000318438 USP17L8P0C7I0 530 aa17.37■□□□□ 0.37
SYCN-201ENST00000318438 TCIRG1Q13488 830 aa17.37■□□□□ 0.37
SYCN-201ENST00000318438 NBPF9Q3BBW0 867 aa17.37■□□□□ 0.37
SYCN-201ENST00000318438 DCAF8Q5TAQ9 597 aa17.37■□□□□ 0.37
SYCN-201ENST00000318438 SPRYD7Q5W111 196 aa17.37■□□□□ 0.37
SYCN-201ENST00000318438 CD99L2Q8TCZ2 262 aa17.37■□□□□ 0.37
SYCN-201ENST00000318438 CFAP53Q96M91 514 aa17.37■□□□□ 0.37
SYCN-201ENST00000318438 GMLQ99445 158 aa17.37■□□□□ 0.37
SYCN-201ENST00000318438 IFNL1Q8IU54 200 aa17.36■□□□□ 0.37
SYCN-201ENST00000318438 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.36■□□□□ 0.37
SYCN-201ENST00000318438 NUDCQ9Y266 331 aa17.36■□□□□ 0.37
SYCN-201ENST00000318438 ZNF609O15014 1411 aa17.36■□□□□ 0.37
SYCN-201ENST00000318438 EIF2S2P20042 333 aaKnown RBP17.35■□□□□ 0.37
SYCN-201ENST00000318438 NF2P35240 595 aa17.35■□□□□ 0.37
SYCN-201ENST00000318438 AIMP1Q12904 312 aaKnown RBP17.35■□□□□ 0.37
SYCN-201ENST00000318438 HSP90AB3PQ58FF7 597 aa17.35■□□□□ 0.37
SYCN-201ENST00000318438 TMEM106CQ9BVX2 250 aa17.35■□□□□ 0.37
SYCN-201ENST00000318438 UFL1O94874 794 aa17.34■□□□□ 0.37
SYCN-201ENST00000318438 PPP2R1AP30153 589 aa17.34■□□□□ 0.37
SYCN-201ENST00000318438 CAP1Q01518 475 aa17.34■□□□□ 0.37
SYCN-201ENST00000318438 ERO1AQ96HE7 468 aa17.34■□□□□ 0.37
SYCN-201ENST00000318438 EFCC1Q9HA90 598 aa17.34■□□□□ 0.37
SYCN-201ENST00000318438 RBM27Q9P2N5 1060 aaKnown RBP17.34■□□□□ 0.37
SYCN-201ENST00000318438 FZD1Q9UP38 647 aa17.34■□□□□ 0.37
SYCN-201ENST00000318438 IGF2BP3O00425 579 aaKnown RBP eCLIP17.33■□□□□ 0.36
SYCN-201ENST00000318438 COPS6Q7L5N1 327 aa17.33■□□□□ 0.36
SYCN-201ENST00000318438 ARMC9Q7Z3E5 817 aa17.33■□□□□ 0.36
SYCN-201ENST00000318438 XAGE3Q8WTP9 111 aa17.33■□□□□ 0.36
SYCN-201ENST00000318438 ZNF333Q96JL9 665 aa17.33■□□□□ 0.36
SYCN-201ENST00000318438 MANSC4A6NHS7 340 aaPredicted RBP17.32■□□□□ 0.36
SYCN-201ENST00000318438 ZEB1P37275 1124 aaPredicted RBP17.32■□□□□ 0.36
SYCN-201ENST00000318438 SF3B3Q15393 1217 aaKnown RBP17.32■□□□□ 0.36
SYCN-201ENST00000318438 LDLRAD1Q5T700 205 aa17.32■□□□□ 0.36
SYCN-201ENST00000318438 NECTIN2Q92692 538 aa17.32■□□□□ 0.36
SYCN-201ENST00000318438 FAM89AQ96GI7 184 aa17.32■□□□□ 0.36
SYCN-201ENST00000318438 MYCP01106 439 aaPredicted RBP17.31■□□□□ 0.36
SYCN-201ENST00000318438 PODXL2Q9NZ53 605 aa17.31■□□□□ 0.36
SYCN-201ENST00000318438 ANKIB1Q9P2G1 1089 aa17.31■□□□□ 0.36
SYCN-201ENST00000318438 ANGEL1Q9UNK9 670 aaKnown RBP17.31■□□□□ 0.36
SYCN-201ENST00000318438 LAMA3Q16787 3333 aa17.31■□□□□ 0.36
SYCN-201ENST00000318438 USP17L3A6NCW0 530 aa17.3■□□□□ 0.36
SYCN-201ENST00000318438 USP17L4A6NCW7 530 aa17.3■□□□□ 0.36
SYCN-201ENST00000318438 INHBEP58166 350 aa17.3■□□□□ 0.36
SYCN-201ENST00000318438 RPS8P62241 208 aaKnown RBP17.3■□□□□ 0.36
SYCN-201ENST00000318438 CRHR2Q13324 411 aa17.3■□□□□ 0.36
SYCN-201ENST00000318438 SLC4A8Q2Y0W8 1093 aa17.3■□□□□ 0.36
SYCN-201ENST00000318438 RTL5Q5HYW3 569 aaPredicted RBP17.3■□□□□ 0.36
SYCN-201ENST00000318438 USP17L1Q7RTZ2 530 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms