RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 AK9Q5TCS8 1911 aa8.74□□□□□ -1.01
CDHR3-201ENST00000317716 PTCD1O75127 700 aaKnown RBP8.74□□□□□ -1.01
CDHR3-201ENST00000317716 TRDNQ13061 729 aa8.74□□□□□ -1.01
CDHR3-201ENST00000317716 FAM227BQ96M60 508 aa8.74□□□□□ -1.01
CDHR3-201ENST00000317716 DRC1Q96MC2 740 aa8.74□□□□□ -1.01
CDHR3-201ENST00000317716 PHAXQ9H814 394 aaKnown RBP8.74□□□□□ -1.01
CDHR3-201ENST00000317716 ARFGAP3Q9NP61 516 aa8.74□□□□□ -1.01
CDHR3-201ENST00000317716 LZTFL1Q9NQ48 299 aa8.74□□□□□ -1.01
CDHR3-201ENST00000317716 KIAA0232Q92628 1395 aa8.74□□□□□ -1.01
CDHR3-201ENST00000317716 EIF4A2Q14240 407 aaKnown RBP8.74□□□□□ -1.01
CDHR3-201ENST00000317716 ADCK5Q3MIX3 580 aa8.74□□□□□ -1.01
CDHR3-201ENST00000317716 DNAJC21Q5F1R6 531 aaKnown RBP8.74□□□□□ -1.01
CDHR3-201ENST00000317716 FBXO38Q6PIJ6 1188 aa8.74□□□□□ -1.01
CDHR3-201ENST00000317716 DDX46Q7L014 1031 aaKnown RBP8.74□□□□□ -1.01
CDHR3-201ENST00000317716 ERO1AQ96HE7 468 aa8.74□□□□□ -1.01
CDHR3-201ENST00000317716 FTOQ9C0B1 505 aaKnown RBP eCLIP8.74□□□□□ -1.01
CDHR3-201ENST00000317716 ECHDC1Q9NTX5 307 aa8.74□□□□□ -1.01
CDHR3-201ENST00000317716 AXIN2Q9Y2T1 843 aa8.74□□□□□ -1.01
CDHR3-201ENST00000317716 IBTKQ9P2D0 1353 aaPredicted RBP8.73□□□□□ -1.01
CDHR3-201ENST00000317716 IPO7O95373 1038 aaKnown RBP8.73□□□□□ -1.01
CDHR3-201ENST00000317716 NMIQ13287 307 aaPredicted RBP8.73□□□□□ -1.01
CDHR3-201ENST00000317716 PPFIBP1Q86W92 1011 aa8.73□□□□□ -1.01
CDHR3-201ENST00000317716 TTC5Q8N0Z6 440 aa8.73□□□□□ -1.01
CDHR3-201ENST00000317716 EDC3Q96F86 508 aaKnown RBP8.73□□□□□ -1.01
CDHR3-201ENST00000317716 GDAP1L1Q96MZ0 367 aa8.73□□□□□ -1.01
CDHR3-201ENST00000317716 FAM107BQ9H098 131 aa8.73□□□□□ -1.01
CDHR3-201ENST00000317716 EPC1Q9H2F5 836 aa8.73□□□□□ -1.01
CDHR3-201ENST00000317716 RASSF4Q9H2L5 321 aa8.73□□□□□ -1.01
CDHR3-201ENST00000317716 USP27XA6NNY8 438 aa8.73□□□□□ -1.01
CDHR3-201ENST00000317716 UBASH3AP57075 661 aa8.73□□□□□ -1.01
CDHR3-201ENST00000317716 ME3Q16798 604 aa8.73□□□□□ -1.01
CDHR3-201ENST00000317716 ACBD3Q9H3P7 528 aa8.73□□□□□ -1.01
CDHR3-201ENST00000317716 NCOA5Q9HCD5 579 aaKnown RBP8.73□□□□□ -1.01
CDHR3-201ENST00000317716 ZCCHC17Q9NP64 241 aaKnown RBP8.73□□□□□ -1.01
CDHR3-201ENST00000317716 HDAC5Q9UQL6 1122 aa8.73□□□□□ -1.01
CDHR3-201ENST00000317716 MTMR6Q9Y217 621 aa8.73□□□□□ -1.01
CDHR3-201ENST00000317716 ARHGAP23Q9P227 1491 aa8.73□□□□□ -1.01
CDHR3-201ENST00000317716 KIF2AO00139 706 aaPredicted RBP8.73□□□□□ -1.01
CDHR3-201ENST00000317716 PTH1RQ03431 593 aa8.73□□□□□ -1.01
CDHR3-201ENST00000317716 KLHDC4Q8TBB5 520 aa8.73□□□□□ -1.01
CDHR3-201ENST00000317716 HINFPQ9BQA5 517 aa8.73□□□□□ -1.01
CDHR3-201ENST00000317716 KCNF1Q9H3M0 494 aa8.73□□□□□ -1.01
CDHR3-201ENST00000317716 SNRKQ9NRH2 765 aa8.73□□□□□ -1.01
CDHR3-201ENST00000317716 RAD50Q92878 1312 aa8.72□□□□□ -1.01
CDHR3-201ENST00000317716 EIF3JO75822 258 aaKnown RBP8.72□□□□□ -1.01
CDHR3-201ENST00000317716 GTF2E1P29083 439 aaPredicted RBP8.72□□□□□ -1.01
CDHR3-201ENST00000317716 OAS2P29728 719 aaKnown RBP8.72□□□□□ -1.01
CDHR3-201ENST00000317716 MNAT1P51948 309 aa8.72□□□□□ -1.01
CDHR3-201ENST00000317716 ATP8B2P98198 1209 aa8.72□□□□□ -1.01
CDHR3-201ENST00000317716 CREB3L3Q68CJ9 461 aa8.72□□□□□ -1.01
CDHR3-201ENST00000317716 CCDC129Q6ZRS4 1044 aa8.72□□□□□ -1.01
CDHR3-201ENST00000317716 Q6ZUG5 572 aa8.72□□□□□ -1.01
CDHR3-201ENST00000317716 LEO1Q8WVC0 666 aaPredicted RBP8.72□□□□□ -1.01
CDHR3-201ENST00000317716 MRVI1Q9Y6F6 885 aa8.72□□□□□ -1.01
CDHR3-201ENST00000317716 PIK3R4Q99570 1358 aa8.72□□□□□ -1.01
CDHR3-201ENST00000317716 C1orf167Q5SNV9 1468 aa8.72□□□□□ -1.01
CDHR3-201ENST00000317716 PTPRCP08575 1304 aa8.72□□□□□ -1.01
CDHR3-201ENST00000317716 ERLIN1O75477 346 aa8.72□□□□□ -1.01
CDHR3-201ENST00000317716 HNRNPH2P55795 449 aaKnown RBP8.72□□□□□ -1.01
CDHR3-201ENST00000317716 EYA1Q99502 592 aa8.72□□□□□ -1.01
CDHR3-201ENST00000317716 PLEKHA4Q9H4M7 779 aa8.72□□□□□ -1.01
CDHR3-201ENST00000317716 SLIT1O75093 1534 aa8.72□□□□□ -1.01
CDHR3-201ENST00000317716 CCP110O43303 1012 aa8.72□□□□□ -1.01
CDHR3-201ENST00000317716 NEMFO60524 1076 aa8.72□□□□□ -1.01
CDHR3-201ENST00000317716 TATP17735 454 aaPredicted RBP8.72□□□□□ -1.01
CDHR3-201ENST00000317716 HOXC9P31274 260 aa8.72□□□□□ -1.01
CDHR3-201ENST00000317716 DDIT3P35638 169 aa8.72□□□□□ -1.01
CDHR3-201ENST00000317716 GSDMDP57764 484 aa8.72□□□□□ -1.01
CDHR3-201ENST00000317716 DHX8Q14562 1220 aaKnown RBP8.72□□□□□ -1.01
CDHR3-201ENST00000317716 NBPF6Q5VWK0 638 aa8.72□□□□□ -1.01
CDHR3-201ENST00000317716 MICALL1Q8N3F8 863 aa8.72□□□□□ -1.01
CDHR3-201ENST00000317716 TXLNBQ8N3L3 684 aa8.72□□□□□ -1.01
CDHR3-201ENST00000317716 SIRT1Q96EB6 747 aa8.72□□□□□ -1.01
CDHR3-201ENST00000317716 C8orf76Q96K31 380 aa8.72□□□□□ -1.01
CDHR3-201ENST00000317716 NBPF4Q96M43 638 aa8.72□□□□□ -1.01
CDHR3-201ENST00000317716 USP21Q9UK80 565 aa8.72□□□□□ -1.01
CDHR3-201ENST00000317716 ADGRB1O14514 1584 aa8.72□□□□□ -1.01
CDHR3-201ENST00000317716 QRICH2Q9H0J4 1663 aa8.72□□□□□ -1.01
CDHR3-201ENST00000317716 APOBRQ0VD83 1088 aa8.71□□□□□ -1.01
CDHR3-201ENST00000317716 PLEKHF1Q96S99 279 aa8.71□□□□□ -1.01
CDHR3-201ENST00000317716 TULP4Q9NRJ4 1543 aa8.71□□□□□ -1.01
CDHR3-201ENST00000317716 FAM135BQ49AJ0 1406 aa8.71□□□□□ -1.01
CDHR3-201ENST00000317716 SRCAPQ6ZRS2 3230 aa8.71□□□□□ -1.01
CDHR3-201ENST00000317716 SGSM2O43147 1006 aa8.71□□□□□ -1.02
CDHR3-201ENST00000317716 DDX58O95786 925 aaKnown RBP8.71□□□□□ -1.02
CDHR3-201ENST00000317716 MATR3P43243 847 aaKnown RBP eCLIP8.71□□□□□ -1.02
CDHR3-201ENST00000317716 IRX5P78411 483 aaPredicted RBP8.71□□□□□ -1.02
CDHR3-201ENST00000317716 TERF2Q15554 542 aa8.71□□□□□ -1.02
CDHR3-201ENST00000317716 GPIHBP1Q8IV16 184 aa8.71□□□□□ -1.02
CDHR3-201ENST00000317716 NEK1Q96PY6 1258 aa8.71□□□□□ -1.02
CDHR3-201ENST00000317716 HOOK1Q9UJC3 728 aaKnown RBP8.71□□□□□ -1.02
CDHR3-201ENST00000317716 ZSCAN12O43309 604 aa8.71□□□□□ -1.02
CDHR3-201ENST00000317716 RDXP35241 583 aaKnown RBP8.71□□□□□ -1.02
CDHR3-201ENST00000317716 LONRF3Q496Y0 759 aa8.71□□□□□ -1.02
CDHR3-201ENST00000317716 KMT5BQ4FZB7 885 aa8.71□□□□□ -1.02
CDHR3-201ENST00000317716 DNAAF4Q8WXU2 420 aa8.71□□□□□ -1.02
CDHR3-201ENST00000317716 ABCC4O15439 1325 aa8.71□□□□□ -1.02
CDHR3-201ENST00000317716 SLC39A6Q13433 755 aa8.7□□□□□ -1.02
CDHR3-201ENST00000317716 ZSCAN26Q16670 478 aa8.7□□□□□ -1.02
CDHR3-201ENST00000317716 CCDC144BQ3MJ40 725 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 685.2 ms