RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 STX1AQ16623 288 aa19.13■□□□□ 0.65
CACFD1-202ENST00000316948 USP54Q70EL1 1684 aa19.13■□□□□ 0.65
CACFD1-202ENST00000316948 HIP1O00291 1037 aa19.13■□□□□ 0.65
CACFD1-202ENST00000316948 FGD1P98174 961 aa19.13■□□□□ 0.65
CACFD1-202ENST00000316948 ESCO1Q5FWF5 840 aa19.13■□□□□ 0.65
CACFD1-202ENST00000316948 SARM1Q6SZW1 724 aa19.13■□□□□ 0.65
CACFD1-202ENST00000316948 CCAR2Q8N163 923 aaKnown RBP19.13■□□□□ 0.65
CACFD1-202ENST00000316948 EDC3Q96F86 508 aaKnown RBP19.13■□□□□ 0.65
CACFD1-202ENST00000316948 ERO1AQ96HE7 468 aa19.13■□□□□ 0.65
CACFD1-202ENST00000316948 LRRC2Q9BYS8 371 aa19.13■□□□□ 0.65
CACFD1-202ENST00000316948 PPFIA3O75145 1194 aa19.12■□□□□ 0.65
CACFD1-202ENST00000316948 CAVIN2O95810 425 aa19.12■□□□□ 0.65
CACFD1-202ENST00000316948 CFAP45Q9UL16 551 aa19.12■□□□□ 0.65
CACFD1-202ENST00000316948 NFAT5O94916 1531 aa19.12■□□□□ 0.65
CACFD1-202ENST00000316948 SLU7O95391 586 aaKnown RBP19.12■□□□□ 0.65
CACFD1-202ENST00000316948 GOLPH3LQ9H4A5 285 aa19.11■□□□□ 0.65
CACFD1-202ENST00000316948 LINS1Q8NG48 757 aa19.11■□□□□ 0.65
CACFD1-202ENST00000316948 GTF3C6Q969F1 213 aa19.11■□□□□ 0.65
CACFD1-202ENST00000316948 GTF2E1P29083 439 aaPredicted RBP19.1■□□□□ 0.65
CACFD1-202ENST00000316948 DHX40Q8IX18 779 aaKnown RBP19.1■□□□□ 0.65
CACFD1-202ENST00000316948 AOPEPQ8N6M6 819 aa19.1■□□□□ 0.65
CACFD1-202ENST00000316948 NPHP4O75161 1426 aaPredicted RBP19.1■□□□□ 0.65
CACFD1-202ENST00000316948 Q6ZUG5 572 aa19.1■□□□□ 0.65
CACFD1-202ENST00000316948 TMEM51Q9NW97 253 aa19.1■□□□□ 0.65
CACFD1-202ENST00000316948 LMO7Q8WWI1 1683 aa19.1■□□□□ 0.65
CACFD1-202ENST00000316948 LMOD2Q6P5Q4 547 aa19.1■□□□□ 0.65
CACFD1-202ENST00000316948 CCDC73Q6ZRK6 1079 aa19.1■□□□□ 0.65
CACFD1-202ENST00000316948 KINO60870 393 aaKnown RBP19.09■□□□□ 0.65
CACFD1-202ENST00000316948 ERCC6LQ2NKX8 1250 aa19.09■□□□□ 0.65
CACFD1-202ENST00000316948 AMOTQ4VCS5 1084 aa19.09■□□□□ 0.65
CACFD1-202ENST00000316948 ZNF446Q9NWS9 450 aa19.09■□□□□ 0.65
CACFD1-202ENST00000316948 CCDC66A2RUB6 948 aa19.09■□□□□ 0.65
CACFD1-202ENST00000316948 KCNH5Q8NCM2 988 aa19.09■□□□□ 0.65
CACFD1-202ENST00000316948 ADGRL3Q9HAR2 1447 aa19.08■□□□□ 0.65
CACFD1-202ENST00000316948 ERBB3P21860 1342 aa19.08■□□□□ 0.65
CACFD1-202ENST00000316948 IGKV5-2P06315 115 aa19.08■□□□□ 0.65
CACFD1-202ENST00000316948 NEK1Q96PY6 1258 aa19.08■□□□□ 0.65
CACFD1-202ENST00000316948 ZSCAN16Q9H4T2 348 aaPredicted RBP19.08■□□□□ 0.65
CACFD1-202ENST00000316948 NDUFB9Q9Y6M9 179 aa19.08■□□□□ 0.65
CACFD1-202ENST00000316948 CHGBP05060 677 aa19.08■□□□□ 0.64
CACFD1-202ENST00000316948 MYL6BP14649 208 aa19.08■□□□□ 0.64
CACFD1-202ENST00000316948 SNW1Q13573 536 aaKnown RBP19.08■□□□□ 0.64
CACFD1-202ENST00000316948 LRRN4CLQ8ND94 238 aa19.08■□□□□ 0.64
CACFD1-202ENST00000316948 HDAC5Q9UQL6 1122 aa19.08■□□□□ 0.64
CACFD1-202ENST00000316948 TAF5LO75529 589 aa19.07■□□□□ 0.64
CACFD1-202ENST00000316948 SLC39A6Q13433 755 aa19.07■□□□□ 0.64
CACFD1-202ENST00000316948 RIC3Q7Z5B4 369 aa19.07■□□□□ 0.64
CACFD1-202ENST00000316948 ANO10Q9NW15 660 aa19.07■□□□□ 0.64
CACFD1-202ENST00000316948 CTAGE5O15320 804 aa19.07■□□□□ 0.64
CACFD1-202ENST00000316948 GUCY1B3Q02153 619 aa19.07■□□□□ 0.64
CACFD1-202ENST00000316948 SYT10Q6XYQ8 523 aa19.07■□□□□ 0.64
CACFD1-202ENST00000316948 CCDC129Q6ZRS4 1044 aa19.07■□□□□ 0.64
CACFD1-202ENST00000316948 ALDH8A1Q9H2A2 487 aaPredicted RBP19.07■□□□□ 0.64
CACFD1-202ENST00000316948 HMG20BQ9P0W2 317 aa19.07■□□□□ 0.64
CACFD1-202ENST00000316948 NAP1L2Q9ULW6 460 aaPredicted RBP19.07■□□□□ 0.64
CACFD1-202ENST00000316948 HEG1Q9ULI3 1381 aa19.07■□□□□ 0.64
CACFD1-202ENST00000316948 GCP02774 474 aa19.06■□□□□ 0.64
CACFD1-202ENST00000316948 ME1P48163 572 aa19.06■□□□□ 0.64
CACFD1-202ENST00000316948 SCRN1Q12765 414 aa19.06■□□□□ 0.64
CACFD1-202ENST00000316948 PDIA6Q15084 440 aa19.06■□□□□ 0.64
CACFD1-202ENST00000316948 EPHA10Q5JZY3 1008 aa19.06■□□□□ 0.64
CACFD1-202ENST00000316948 CEP57L1Q8IYX8 460 aa19.06■□□□□ 0.64
CACFD1-202ENST00000316948 ANKRD24Q8TF21 1146 aa19.06■□□□□ 0.64
CACFD1-202ENST00000316948 DDX21Q9NR30 783 aaKnown RBP eCLIP19.06■□□□□ 0.64
CACFD1-202ENST00000316948 DDX58O95786 925 aaKnown RBP19.06■□□□□ 0.64
CACFD1-202ENST00000316948 ADD1P35611 737 aaKnown RBP19.06■□□□□ 0.64
CACFD1-202ENST00000316948 GORABQ5T7V8 394 aa19.06■□□□□ 0.64
CACFD1-202ENST00000316948 FSIP1Q8NA03 581 aa19.06■□□□□ 0.64
CACFD1-202ENST00000316948 USP28Q96RU2 1077 aa19.06■□□□□ 0.64
CACFD1-202ENST00000316948 FAM53CQ9NYF3 392 aa19.05■□□□□ 0.64
CACFD1-202ENST00000316948 MED23Q9ULK4 1368 aa19.05■□□□□ 0.64
CACFD1-202ENST00000316948 SMC2O95347 1197 aa19.05■□□□□ 0.64
CACFD1-202ENST00000316948 FMNL2Q96PY5 1086 aa19.05■□□□□ 0.64
CACFD1-202ENST00000316948 UTYO14607 1347 aa19.05■□□□□ 0.64
CACFD1-202ENST00000316948 E4F1Q66K89 784 aaPredicted RBP19.04■□□□□ 0.64
CACFD1-202ENST00000316948 SNRKQ9NRH2 765 aa19.04■□□□□ 0.64
CACFD1-202ENST00000316948 RCOR1Q9UKL0 485 aa19.04■□□□□ 0.64
CACFD1-202ENST00000316948 AXIN2Q9Y2T1 843 aa19.04■□□□□ 0.64
CACFD1-202ENST00000316948 CHD2O14647 1828 aaKnown RBP19.04■□□□□ 0.64
CACFD1-202ENST00000316948 VGLL3A8MV65 326 aa19.04■□□□□ 0.64
CACFD1-202ENST00000316948 TIGD1Q96MW7 591 aa19.04■□□□□ 0.64
CACFD1-202ENST00000316948 SDF4Q9BRK5 362 aa19.04■□□□□ 0.64
CACFD1-202ENST00000316948 NOL10Q9BSC4 688 aaKnown RBP19.04■□□□□ 0.64
CACFD1-202ENST00000316948 CDK11BP21127 795 aaKnown RBP19.04■□□□□ 0.64
CACFD1-202ENST00000316948 PIP4K2AP48426 406 aaPredicted RBP19.04■□□□□ 0.64
CACFD1-202ENST00000316948 CCT2P78371 535 aaKnown RBP19.04■□□□□ 0.64
CACFD1-202ENST00000316948 IRX5P78411 483 aaPredicted RBP19.04■□□□□ 0.64
CACFD1-202ENST00000316948 KRT32Q14532 448 aa19.04■□□□□ 0.64
CACFD1-202ENST00000316948 SLFNL1Q499Z3 407 aa19.04■□□□□ 0.64
CACFD1-202ENST00000316948 TMC6Q7Z403 805 aa19.04■□□□□ 0.64
CACFD1-202ENST00000316948 NBPF11Q86T75 865 aa19.04■□□□□ 0.64
CACFD1-202ENST00000316948 ARHGEF25Q86VW2 580 aa19.04■□□□□ 0.64
CACFD1-202ENST00000316948 TRERF1Q96PN7 1200 aa19.04■□□□□ 0.64
CACFD1-202ENST00000316948 SEC62Q99442 399 aaKnown RBP19.04■□□□□ 0.64
CACFD1-202ENST00000316948 GSDMDP57764 484 aa19.03■□□□□ 0.64
CACFD1-202ENST00000316948 PPP1R13BQ96KQ4 1090 aa19.03■□□□□ 0.64
CACFD1-202ENST00000316948 COL15A1P39059 1388 aa19.03■□□□□ 0.64
CACFD1-202ENST00000316948 FAM160A1Q05DH4 1040 aa19.03■□□□□ 0.64
CACFD1-202ENST00000316948 BMS1Q14692 1282 aaKnown RBP19.03■□□□□ 0.64
CACFD1-202ENST00000316948 TSGA10IPQ3SY00 556 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms