RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 PHAXQ9H814 394 aaKnown RBP9.91□□□□□ -0.82
USF3-201ENST00000316407 NLRP6P59044 892 aa9.91□□□□□ -0.82
USF3-201ENST00000316407 PPP1R7Q15435 360 aa9.91□□□□□ -0.82
USF3-201ENST00000316407 TBC1D5Q92609 795 aa9.91□□□□□ -0.82
USF3-201ENST00000316407 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.91□□□□□ -0.82
USF3-201ENST00000316407 CACNA2D3Q8IZS8 1091 aa9.91□□□□□ -0.82
USF3-201ENST00000316407 HSPA1LP34931 641 aa9.91□□□□□ -0.82
USF3-201ENST00000316407 UTP14CQ5TAP6 766 aaKnown RBP9.91□□□□□ -0.82
USF3-201ENST00000316407 IRX5P78411 483 aaPredicted RBP9.9□□□□□ -0.82
USF3-201ENST00000316407 GABPB1Q06547 395 aaPredicted RBP9.9□□□□□ -0.82
USF3-201ENST00000316407 TMEM266Q2M3C6 531 aa9.9□□□□□ -0.82
USF3-201ENST00000316407 CTCFLQ8NI51 663 aaPredicted RBP9.9□□□□□ -0.82
USF3-201ENST00000316407 RIPOR2Q9Y4F9 1068 aa9.9□□□□□ -0.82
USF3-201ENST00000316407 CASQ2O14958 399 aaPredicted RBP9.9□□□□□ -0.82
USF3-201ENST00000316407 IFI16Q16666 785 aaKnown RBP9.9□□□□□ -0.82
USF3-201ENST00000316407 TTC19Q6DKK2 380 aaPredicted RBP9.9□□□□□ -0.82
USF3-201ENST00000316407 EEF2P13639 858 aaKnown RBP9.9□□□□□ -0.82
USF3-201ENST00000316407 MGARPQ8TDB4 240 aa9.9□□□□□ -0.82
USF3-201ENST00000316407 PSMB7Q99436 277 aa9.9□□□□□ -0.82
USF3-201ENST00000316407 TRIM4Q9C037 500 aa9.9□□□□□ -0.82
USF3-201ENST00000316407 BAIAP2L1Q9UHR4 511 aa9.9□□□□□ -0.82
USF3-201ENST00000316407 TSPYL2Q9H2G4 693 aaPredicted RBP9.9□□□□□ -0.82
USF3-201ENST00000316407 CAPN7Q9Y6W3 813 aa9.9□□□□□ -0.82
USF3-201ENST00000316407 PPFIBP2Q8ND30 876 aa9.9□□□□□ -0.82
USF3-201ENST00000316407 MRFAP1L1Q96HT8 127 aa9.9□□□□□ -0.82
USF3-201ENST00000316407 SLC26A6Q9BXS9 759 aa9.9□□□□□ -0.82
USF3-201ENST00000316407 GLRX3O76003 335 aaKnown RBP9.9□□□□□ -0.83
USF3-201ENST00000316407 CYLC1P35663 651 aaPredicted RBP9.9□□□□□ -0.83
USF3-201ENST00000316407 LIG3P49916 1009 aa9.9□□□□□ -0.83
USF3-201ENST00000316407 STX17P56962 302 aa9.9□□□□□ -0.83
USF3-201ENST00000316407 MUM1Q2TAK8 710 aa9.9□□□□□ -0.83
USF3-201ENST00000316407 CCDC8Q9H0W5 538 aaPredicted RBP9.9□□□□□ -0.83
USF3-201ENST00000316407 ZGPATQ8N5A5 531 aaKnown RBP9.9□□□□□ -0.83
USF3-201ENST00000316407 GAS2L2Q8NHY3 880 aa9.9□□□□□ -0.83
USF3-201ENST00000316407 PFDN1O60925 122 aa9.89□□□□□ -0.83
USF3-201ENST00000316407 PPP1R1BQ9UD71 204 aaPredicted RBP9.89□□□□□ -0.83
USF3-201ENST00000316407 CCDC38Q502W7 563 aa9.89□□□□□ -0.83
USF3-201ENST00000316407 CXorf38Q8TB03 319 aa9.89□□□□□ -0.83
USF3-201ENST00000316407 SLC12A5Q9H2X9 1139 aa9.89□□□□□ -0.83
USF3-201ENST00000316407 GPIHBP1Q8IV16 184 aa9.89□□□□□ -0.83
USF3-201ENST00000316407 CTAGE1Q96RT6 745 aa9.89□□□□□ -0.83
USF3-201ENST00000316407 KIF1BPQ96EK5 621 aa9.89□□□□□ -0.83
USF3-201ENST00000316407 ACTN2P35609 894 aa9.89□□□□□ -0.83
USF3-201ENST00000316407 ATP6V1AP38606 617 aa9.89□□□□□ -0.83
USF3-201ENST00000316407 PLCB3Q01970 1234 aa9.89□□□□□ -0.83
USF3-201ENST00000316407 TRIM31Q9BZY9 425 aa9.89□□□□□ -0.83
USF3-201ENST00000316407 GOLGA6BA6NDN3 693 aa9.89□□□□□ -0.83
USF3-201ENST00000316407 NLRP5P59047 1200 aa9.89□□□□□ -0.83
USF3-201ENST00000316407 CCDC174Q6PII3 467 aa9.89□□□□□ -0.83
USF3-201ENST00000316407 XAB2Q9HCS7 855 aaKnown RBP9.89□□□□□ -0.83
USF3-201ENST00000316407 CCDC196A0A1B0GTZ2 297 aa9.89□□□□□ -0.83
USF3-201ENST00000316407 METAP2P50579 478 aaKnown RBP eCLIP9.89□□□□□ -0.83
USF3-201ENST00000316407 DMTNQ08495 405 aa9.89□□□□□ -0.83
USF3-201ENST00000316407 MKRN1Q9UHC7 482 aaKnown RBP9.89□□□□□ -0.83
USF3-201ENST00000316407 A0A087WZG4 1122 aa9.89□□□□□ -0.83
USF3-201ENST00000316407 IFIT3O14879 490 aaKnown RBP9.89□□□□□ -0.83
USF3-201ENST00000316407 CALML4Q96GE6 196 aa9.89□□□□□ -0.83
USF3-201ENST00000316407 NUF2Q9BZD4 464 aa9.89□□□□□ -0.83
USF3-201ENST00000316407 RBM28Q9NW13 759 aaKnown RBP9.89□□□□□ -0.83
USF3-201ENST00000316407 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.88□□□□□ -0.83
USF3-201ENST00000316407 CETN3O15182 167 aa9.88□□□□□ -0.83
USF3-201ENST00000316407 KIF5AQ12840 1032 aa9.88□□□□□ -0.83
USF3-201ENST00000316407 PPANQ9NQ55 473 aaKnown RBP9.88□□□□□ -0.83
USF3-201ENST00000316407 SPAG5Q96R06 1193 aa9.88□□□□□ -0.83
USF3-201ENST00000316407 ERICH3Q5RHP9 1530 aa9.88□□□□□ -0.83
USF3-201ENST00000316407 CCDC122Q5T0U0 273 aa9.88□□□□□ -0.83
USF3-201ENST00000316407 ARHGAP5Q13017 1502 aa9.88□□□□□ -0.83
USF3-201ENST00000316407 TTC22Q5TAA0 569 aa9.88□□□□□ -0.83
USF3-201ENST00000316407 PIK3R5Q8WYR1 880 aa9.88□□□□□ -0.83
USF3-201ENST00000316407 RNF10Q8N5U6 811 aaKnown RBP9.88□□□□□ -0.83
USF3-201ENST00000316407 RBSNQ9H1K0 784 aa9.88□□□□□ -0.83
USF3-201ENST00000316407 OPHN1O60890 802 aa9.88□□□□□ -0.83
USF3-201ENST00000316407 CETN1Q12798 172 aa9.88□□□□□ -0.83
USF3-201ENST00000316407 PRR16Q569H4 304 aa9.88□□□□□ -0.83
USF3-201ENST00000316407 WDR78Q5VTH9 848 aa9.88□□□□□ -0.83
USF3-201ENST00000316407 FMNL3Q8IVF7 1028 aa9.88□□□□□ -0.83
USF3-201ENST00000316407 TCP11L1Q9NUJ3 509 aa9.88□□□□□ -0.83
USF3-201ENST00000316407 NKIRAS1Q9NYS0 192 aa9.88□□□□□ -0.83
USF3-201ENST00000316407 ALDH3A1P30838 453 aa9.88□□□□□ -0.83
USF3-201ENST00000316407 USP16Q9Y5T5 823 aa9.88□□□□□ -0.83
USF3-201ENST00000316407 CABP4P57796 275 aa9.88□□□□□ -0.83
USF3-201ENST00000316407 NSD3Q9BZ95 1437 aa9.88□□□□□ -0.83
USF3-201ENST00000316407 ATICP31939 592 aa9.88□□□□□ -0.83
USF3-201ENST00000316407 PPP2R5AQ15172 486 aa9.88□□□□□ -0.83
USF3-201ENST00000316407 TMEM67Q5HYA8 995 aa9.88□□□□□ -0.83
USF3-201ENST00000316407 METTL24Q5JXM2 366 aa9.87□□□□□ -0.83
USF3-201ENST00000316407 FYB2Q5VWT5 728 aa9.87□□□□□ -0.83
USF3-201ENST00000316407 ZNF530Q6P9A1 599 aaPredicted RBP9.87□□□□□ -0.83
USF3-201ENST00000316407 BAG1Q99933 345 aaPredicted RBP9.87□□□□□ -0.83
USF3-201ENST00000316407 SH2D4BQ5SQS7 431 aa9.87□□□□□ -0.83
USF3-201ENST00000316407 ANKRD30BQ9BXX2 1392 aa9.87□□□□□ -0.83
USF3-201ENST00000316407 DPH6Q7L8W6 267 aa9.87□□□□□ -0.83
USF3-201ENST00000316407 MRPS27Q92552 414 aaKnown RBP9.87□□□□□ -0.83
USF3-201ENST00000316407 FRMD4BQ9Y2L6 1034 aa9.87□□□□□ -0.83
USF3-201ENST00000316407 FYCO1Q9BQS8 1478 aa9.87□□□□□ -0.83
USF3-201ENST00000316407 ATP1A2P50993 1020 aa9.87□□□□□ -0.83
USF3-201ENST00000316407 PPP4R3AQ6IN85 833 aa9.87□□□□□ -0.83
USF3-201ENST00000316407 CFTRP13569 1480 aa9.87□□□□□ -0.83
USF3-201ENST00000316407 PDE6BP35913 854 aa9.87□□□□□ -0.83
USF3-201ENST00000316407 UBA7P41226 1012 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms