RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 RNF113AO15541 343 aaKnown RBP15.83■□□□□ 0.13
SPAST-201ENST00000315285 CCDC152Q4G0S7 254 aa15.83■□□□□ 0.13
SPAST-201ENST00000315285 IP6K1Q92551 441 aa15.83■□□□□ 0.13
SPAST-201ENST00000315285 RNMTO43148 476 aaKnown RBP15.83■□□□□ 0.12
SPAST-201ENST00000315285 APOBRQ0VD83 1088 aa15.83■□□□□ 0.12
SPAST-201ENST00000315285 TDRD12Q587J7 1177 aaKnown RBP15.83■□□□□ 0.12
SPAST-201ENST00000315285 DDX21Q9NR30 783 aaKnown RBP eCLIP15.83■□□□□ 0.12
SPAST-201ENST00000315285 GCP02774 474 aa15.83■□□□□ 0.12
SPAST-201ENST00000315285 PTPDC1A2A3K4 754 aa15.82■□□□□ 0.12
SPAST-201ENST00000315285 N4BP3O15049 544 aa15.82■□□□□ 0.12
SPAST-201ENST00000315285 LDHCP07864 332 aa15.82■□□□□ 0.12
SPAST-201ENST00000315285 PAFAH1B1P43034 410 aa15.82■□□□□ 0.12
SPAST-201ENST00000315285 AMPD3Q01432 767 aa15.82■□□□□ 0.12
SPAST-201ENST00000315285 CHST3Q7LGC8 479 aa15.82■□□□□ 0.12
SPAST-201ENST00000315285 SLF2Q8IX21 1173 aa15.82■□□□□ 0.12
SPAST-201ENST00000315285 ESR2Q92731 530 aa15.82■□□□□ 0.12
SPAST-201ENST00000315285 BABAM1Q9NWV8 329 aa15.82■□□□□ 0.12
SPAST-201ENST00000315285 RTL1A6NKG5 1358 aa15.82■□□□□ 0.12
SPAST-201ENST00000315285 KIF20AO95235 890 aa15.82■□□□□ 0.12
SPAST-201ENST00000315285 NEFHP12036 1026 aa15.82■□□□□ 0.12
SPAST-201ENST00000315285 IDEP14735 1019 aa15.82■□□□□ 0.12
SPAST-201ENST00000315285 CALML4Q96GE6 196 aa15.82■□□□□ 0.12
SPAST-201ENST00000315285 BMP15O95972 392 aa15.82■□□□□ 0.12
SPAST-201ENST00000315285 VPS36Q86VN1 386 aa15.82■□□□□ 0.12
SPAST-201ENST00000315285 TAX1BP1Q86VP1 789 aa15.82■□□□□ 0.12
SPAST-201ENST00000315285 UBA5Q9GZZ9 404 aa15.82■□□□□ 0.12
SPAST-201ENST00000315285 SLC4A4Q9Y6R1 1079 aa15.82■□□□□ 0.12
SPAST-201ENST00000315285 ADGBQ8N7X0 1667 aa15.82■□□□□ 0.12
SPAST-201ENST00000315285 SPDYE4A6NLX3 237 aa15.82■□□□□ 0.12
SPAST-201ENST00000315285 CYP7A1P22680 504 aa15.82■□□□□ 0.12
SPAST-201ENST00000315285 SBNO1A3KN83 1393 aa15.82■□□□□ 0.12
SPAST-201ENST00000315285 POTEB2H3BUK9 544 aa15.82■□□□□ 0.12
SPAST-201ENST00000315285 ENOX2Q16206 610 aaKnown RBP15.82■□□□□ 0.12
SPAST-201ENST00000315285 TAF3Q5VWG9 929 aa15.82■□□□□ 0.12
SPAST-201ENST00000315285 BAG3O95817 575 aa15.81■□□□□ 0.12
SPAST-201ENST00000315285 RPGRQ92834 1020 aaKnown RBP15.81■□□□□ 0.12
SPAST-201ENST00000315285 CRNKL1Q9BZJ0 848 aaKnown RBP15.81■□□□□ 0.12
SPAST-201ENST00000315285 HSP90AA4PQ58FG1 418 aa15.81■□□□□ 0.12
SPAST-201ENST00000315285 AOX1Q06278 1338 aa15.81■□□□□ 0.12
SPAST-201ENST00000315285 RBSNQ9H1K0 784 aa15.81■□□□□ 0.12
SPAST-201ENST00000315285 AFMP43652 599 aa15.81■□□□□ 0.12
SPAST-201ENST00000315285 DNA2P51530 1060 aa15.8■□□□□ 0.12
SPAST-201ENST00000315285 BMS1Q14692 1282 aaKnown RBP15.8■□□□□ 0.12
SPAST-201ENST00000315285 NBPF7P0C2Y1 421 aaPredicted RBP15.8■□□□□ 0.12
SPAST-201ENST00000315285 KCNA6P17658 529 aa15.8■□□□□ 0.12
SPAST-201ENST00000315285 SPTY2D1Q68D10 685 aaPredicted RBP15.8■□□□□ 0.12
SPAST-201ENST00000315285 LUZP1Q86V48 1076 aa15.8■□□□□ 0.12
SPAST-201ENST00000315285 DCAF5Q96JK2 942 aa15.8■□□□□ 0.12
SPAST-201ENST00000315285 IQSEC3Q9UPP2 1182 aaPredicted RBP15.8■□□□□ 0.12
SPAST-201ENST00000315285 ZMYM3Q14202 1370 aa15.8■□□□□ 0.12
SPAST-201ENST00000315285 HOXB7P09629 217 aa15.8■□□□□ 0.12
SPAST-201ENST00000315285 LMOD1P29536 600 aaPredicted RBP15.8■□□□□ 0.12
SPAST-201ENST00000315285 VAT1LQ9HCJ6 419 aa15.8■□□□□ 0.12
SPAST-201ENST00000315285 PNMA6EA0A0J9YXQ4 647 aa15.8■□□□□ 0.12
SPAST-201ENST00000315285 SGSM2O43147 1006 aa15.8■□□□□ 0.12
SPAST-201ENST00000315285 IFIT1BQ5T764 474 aaKnown RBP15.8■□□□□ 0.12
SPAST-201ENST00000315285 FAM114A1Q8IWE2 563 aa15.8■□□□□ 0.12
SPAST-201ENST00000315285 ZSWIM4Q9H7M6 989 aa15.8■□□□□ 0.12
SPAST-201ENST00000315285 PTGS1P23219 599 aa15.79■□□□□ 0.12
SPAST-201ENST00000315285 DNAI1Q9UI46 699 aa15.79■□□□□ 0.12
SPAST-201ENST00000315285 SEPT7Q16181 437 aaKnown RBP15.79■□□□□ 0.12
SPAST-201ENST00000315285 SLC4A8Q2Y0W8 1093 aa15.79■□□□□ 0.12
SPAST-201ENST00000315285 RMND1Q9NWS8 449 aa15.79■□□□□ 0.12
SPAST-201ENST00000315285 STX8Q9UNK0 236 aa15.79■□□□□ 0.12
SPAST-201ENST00000315285 SNX14Q9Y5W7 946 aa15.79■□□□□ 0.12
SPAST-201ENST00000315285 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.79■□□□□ 0.12
SPAST-201ENST00000315285 TRIM47Q96LD4 638 aa15.79■□□□□ 0.12
SPAST-201ENST00000315285 RRAGBQ5VZM2 374 aa15.79■□□□□ 0.12
SPAST-201ENST00000315285 TBX22Q9Y458 520 aa15.79■□□□□ 0.12
SPAST-201ENST00000315285 MAGI2Q86UL8 1455 aa15.78■□□□□ 0.12
SPAST-201ENST00000315285 USP19O94966 1318 aa15.78■□□□□ 0.12
SPAST-201ENST00000315285 WWC2Q6AWC2 1192 aa15.78■□□□□ 0.12
SPAST-201ENST00000315285 CCDC40Q4G0X9 1142 aa15.78■□□□□ 0.12
SPAST-201ENST00000315285 CABLES1Q8TDN4 633 aa15.78■□□□□ 0.12
SPAST-201ENST00000315285 ALS2CR12Q96Q35 445 aa15.78■□□□□ 0.12
SPAST-201ENST00000315285 CTAGE1Q96RT6 745 aa15.78■□□□□ 0.12
SPAST-201ENST00000315285 GOLGA6L7A0A1B0GV03 622 aa15.78■□□□□ 0.12
SPAST-201ENST00000315285 C6orf229H3BNL8 230 aa15.78■□□□□ 0.12
SPAST-201ENST00000315285 ANKRD18AQ8IVF6 992 aa15.78■□□□□ 0.12
SPAST-201ENST00000315285 PPP1R1BQ9UD71 204 aaPredicted RBP15.78■□□□□ 0.12
SPAST-201ENST00000315285 RPS6KB1P23443 525 aa15.78■□□□□ 0.12
SPAST-201ENST00000315285 HMGB2P26583 209 aaKnown RBP15.78■□□□□ 0.12
SPAST-201ENST00000315285 TNIP1Q15025 636 aa15.78■□□□□ 0.12
SPAST-201ENST00000315285 SHTN1A0MZ66 631 aa15.77■□□□□ 0.12
SPAST-201ENST00000315285 BRAPQ7Z569 592 aa15.77■□□□□ 0.12
SPAST-201ENST00000315285 SPAG1Q07617 926 aa15.77■□□□□ 0.12
SPAST-201ENST00000315285 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.77■□□□□ 0.12
SPAST-201ENST00000315285 KDM5AP29375 1690 aaKnown RBP15.77■□□□□ 0.11
SPAST-201ENST00000315285 ABCC4O15439 1325 aa15.77■□□□□ 0.11
SPAST-201ENST00000315285 KDM6BO15054 1643 aa15.77■□□□□ 0.11
SPAST-201ENST00000315285 TRIM75PA6NK02 468 aa15.77■□□□□ 0.11
SPAST-201ENST00000315285 SLC27A2O14975 620 aa15.77■□□□□ 0.11
SPAST-201ENST00000315285 SBNO2Q9Y2G9 1366 aa15.77■□□□□ 0.11
SPAST-201ENST00000315285 ARHGEF5Q12774 1597 aa15.77■□□□□ 0.11
SPAST-201ENST00000315285 ZNF445P59923 1031 aa15.76■□□□□ 0.11
SPAST-201ENST00000315285 CUL5Q93034 780 aa15.76■□□□□ 0.11
SPAST-201ENST00000315285 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.76■□□□□ 0.11
SPAST-201ENST00000315285 PLXNC1O60486 1568 aa15.76■□□□□ 0.11
SPAST-201ENST00000315285 CCDC178Q5BJE1 867 aa15.76■□□□□ 0.11
SPAST-201ENST00000315285 CNKSR2Q8WXI2 1034 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms