RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 MRPS27Q92552 414 aaKnown RBP10.08□□□□□ -0.8
COL6A5-202ENST00000312481 SMARCC1Q92922 1105 aaPredicted RBP10.08□□□□□ -0.8
COL6A5-202ENST00000312481 MLECQ14165 292 aa10.08□□□□□ -0.8
COL6A5-202ENST00000312481 ARMC9Q7Z3E5 817 aa10.08□□□□□ -0.8
COL6A5-202ENST00000312481 LZTS2Q9BRK4 669 aa10.08□□□□□ -0.8
COL6A5-202ENST00000312481 PLCG2P16885 1265 aa10.08□□□□□ -0.8
COL6A5-202ENST00000312481 MYRIPQ8NFW9 859 aa10.08□□□□□ -0.8
COL6A5-202ENST00000312481 KIF4AO95239 1232 aa10.08□□□□□ -0.8
COL6A5-202ENST00000312481 SLC5A1P13866 664 aa10.08□□□□□ -0.8
COL6A5-202ENST00000312481 CDC25BP30305 580 aa10.08□□□□□ -0.8
COL6A5-202ENST00000312481 PPM1EQ8WY54 764 aa10.08□□□□□ -0.8
COL6A5-202ENST00000312481 TTF2Q9UNY4 1162 aaKnown RBP10.08□□□□□ -0.8
COL6A5-202ENST00000312481 LDHCP07864 332 aa10.08□□□□□ -0.8
COL6A5-202ENST00000312481 SSRP1Q08945 709 aaKnown RBP10.08□□□□□ -0.8
COL6A5-202ENST00000312481 TRIML1Q8N9V2 468 aa10.08□□□□□ -0.8
COL6A5-202ENST00000312481 CALML4Q96GE6 196 aa10.08□□□□□ -0.8
COL6A5-202ENST00000312481 STRN4Q9NRL3 753 aa10.08□□□□□ -0.8
COL6A5-202ENST00000312481 MAP3K5Q99683 1374 aa10.08□□□□□ -0.8
COL6A5-202ENST00000312481 PER1O15534 1290 aaPredicted RBP10.08□□□□□ -0.8
COL6A5-202ENST00000312481 NUTM1Q86Y26 1132 aa10.08□□□□□ -0.8
COL6A5-202ENST00000312481 MED4Q9NPJ6 270 aa10.08□□□□□ -0.8
COL6A5-202ENST00000312481 CNNM1Q9NRU3 951 aa10.08□□□□□ -0.8
COL6A5-202ENST00000312481 TXNDC2Q86VQ3 553 aa10.07□□□□□ -0.8
COL6A5-202ENST00000312481 NAPBQ9H115 298 aa10.07□□□□□ -0.8
COL6A5-202ENST00000312481 PNMA2Q9UL42 364 aa10.07□□□□□ -0.8
COL6A5-202ENST00000312481 VAV2P52735 878 aa10.07□□□□□ -0.8
COL6A5-202ENST00000312481 CNNM3Q8NE01 707 aa10.07□□□□□ -0.8
COL6A5-202ENST00000312481 SLC12A7Q9Y666 1083 aa10.07□□□□□ -0.8
COL6A5-202ENST00000312481 ELL2O00472 640 aaPredicted RBP10.07□□□□□ -0.8
COL6A5-202ENST00000312481 APBA1Q02410 837 aa10.07□□□□□ -0.8
COL6A5-202ENST00000312481 WDR78Q5VTH9 848 aa10.07□□□□□ -0.8
COL6A5-202ENST00000312481 MYL1P05976 194 aa10.07□□□□□ -0.8
COL6A5-202ENST00000312481 ARID4AP29374 1257 aaPredicted RBP10.07□□□□□ -0.8
COL6A5-202ENST00000312481 GLI2P10070 1586 aa10.07□□□□□ -0.8
COL6A5-202ENST00000312481 PDE1AP54750 535 aa10.07□□□□□ -0.8
COL6A5-202ENST00000312481 TRIM37O94972 964 aa10.07□□□□□ -0.8
COL6A5-202ENST00000312481 PPP1R9BQ96SB3 815 aa10.07□□□□□ -0.8
COL6A5-202ENST00000312481 CHD4Q14839 1912 aa10.07□□□□□ -0.8
COL6A5-202ENST00000312481 HMGB3O15347 200 aaKnown RBP10.07□□□□□ -0.8
COL6A5-202ENST00000312481 KRT18P05783 430 aaKnown RBP10.07□□□□□ -0.8
COL6A5-202ENST00000312481 IL15P40933 162 aaPredicted RBP10.07□□□□□ -0.8
COL6A5-202ENST00000312481 DYDC1Q8WWB3 177 aa10.07□□□□□ -0.8
COL6A5-202ENST00000312481 F13A1P00488 732 aa10.06□□□□□ -0.8
COL6A5-202ENST00000312481 HSPA4P34932 840 aa10.06□□□□□ -0.8
COL6A5-202ENST00000312481 CAVIN4Q5BKX8 364 aa10.06□□□□□ -0.8
COL6A5-202ENST00000312481 MROH2AA6NES4 1674 aa10.06□□□□□ -0.8
COL6A5-202ENST00000312481 MYH9P35579 1960 aaKnown RBP10.06□□□□□ -0.8
COL6A5-202ENST00000312481 ZNF213O14771 459 aa10.06□□□□□ -0.8
COL6A5-202ENST00000312481 CABP4P57796 275 aa10.06□□□□□ -0.8
COL6A5-202ENST00000312481 LRRC45Q96CN5 670 aa10.06□□□□□ -0.8
COL6A5-202ENST00000312481 TNRQ92752 1358 aa10.06□□□□□ -0.8
COL6A5-202ENST00000312481 PSMA7O14818 248 aa10.06□□□□□ -0.8
COL6A5-202ENST00000312481 IFIT5Q13325 482 aaKnown RBP10.06□□□□□ -0.8
COL6A5-202ENST00000312481 CEP83Q9Y592 693 aa10.06□□□□□ -0.8
COL6A5-202ENST00000312481 TDO2P48775 406 aa10.06□□□□□ -0.8
COL6A5-202ENST00000312481 ATP8B2P98198 1209 aa10.06□□□□□ -0.8
COL6A5-202ENST00000312481 CCDC77Q9BR77 488 aa10.06□□□□□ -0.8
COL6A5-202ENST00000312481 FEZ2Q9UHY8 353 aaPredicted RBP10.06□□□□□ -0.8
COL6A5-202ENST00000312481 DNAJC21Q5F1R6 531 aaKnown RBP10.06□□□□□ -0.8
COL6A5-202ENST00000312481 GBP6Q6ZN66 633 aa10.06□□□□□ -0.8
COL6A5-202ENST00000312481 CCDC102AQ96A19 550 aa10.06□□□□□ -0.8
COL6A5-202ENST00000312481 IFT74Q96LB3 600 aa10.06□□□□□ -0.8
COL6A5-202ENST00000312481 NEK1Q96PY6 1258 aa10.06□□□□□ -0.8
COL6A5-202ENST00000312481 MYH15Q9Y2K3 1946 aa10.06□□□□□ -0.8
COL6A5-202ENST00000312481 BAG3O95817 575 aa10.06□□□□□ -0.8
COL6A5-202ENST00000312481 RILPL1Q5EBL4 403 aa10.06□□□□□ -0.8
COL6A5-202ENST00000312481 CCDC155Q8N6L0 562 aa10.06□□□□□ -0.8
COL6A5-202ENST00000312481 SPC24Q8NBT2 197 aa10.06□□□□□ -0.8
COL6A5-202ENST00000312481 UTP14AQ9BVJ6 771 aaKnown RBP10.06□□□□□ -0.8
COL6A5-202ENST00000312481 HELLSQ9NRZ9 838 aa10.06□□□□□ -0.8
COL6A5-202ENST00000312481 RGS12O14924 1447 aa10.06□□□□□ -0.8
COL6A5-202ENST00000312481 PLEKHG2Q9H7P9 1386 aa10.06□□□□□ -0.8
COL6A5-202ENST00000312481 EBAG9O00559 213 aa10.05□□□□□ -0.8
COL6A5-202ENST00000312481 KIF4BQ2VIQ3 1234 aa10.05□□□□□ -0.8
COL6A5-202ENST00000312481 CFAP58Q5T655 872 aa10.05□□□□□ -0.8
COL6A5-202ENST00000312481 CHD2O14647 1828 aaKnown RBP10.05□□□□□ -0.8
COL6A5-202ENST00000312481 ATP2A1O14983 1001 aa10.05□□□□□ -0.8
COL6A5-202ENST00000312481 XRCC6P12956 609 aaKnown RBP eCLIP10.05□□□□□ -0.8
COL6A5-202ENST00000312481 ABCD1P33897 745 aa10.05□□□□□ -0.8
COL6A5-202ENST00000312481 FAM69CQ0P6D2 419 aa10.05□□□□□ -0.8
COL6A5-202ENST00000312481 FOXD4L5Q5VV16 416 aaPredicted RBP10.05□□□□□ -0.8
COL6A5-202ENST00000312481 CWC27Q6UX04 472 aaKnown RBP10.05□□□□□ -0.8
COL6A5-202ENST00000312481 CLEC17AQ6ZS10 378 aa10.05□□□□□ -0.8
COL6A5-202ENST00000312481 FOXD4L4Q8WXT5 416 aaPredicted RBP10.05□□□□□ -0.8
COL6A5-202ENST00000312481 HSF2BPO75031 334 aa10.05□□□□□ -0.8
COL6A5-202ENST00000312481 SLMAPQ14BN4 828 aa10.05□□□□□ -0.8
COL6A5-202ENST00000312481 DLC1Q96QB1 1528 aa10.05□□□□□ -0.8
COL6A5-202ENST00000312481 SYKP43405 635 aa10.05□□□□□ -0.8
COL6A5-202ENST00000312481 TSR2Q969E8 191 aaKnown RBP10.05□□□□□ -0.8
COL6A5-202ENST00000312481 KDM4AO75164 1064 aa10.05□□□□□ -0.8
COL6A5-202ENST00000312481 FAM160A1Q05DH4 1040 aa10.05□□□□□ -0.8
COL6A5-202ENST00000312481 LINS1Q8NG48 757 aa10.05□□□□□ -0.8
COL6A5-202ENST00000312481 MPHOSPH6Q99547 160 aaKnown RBP10.05□□□□□ -0.8
COL6A5-202ENST00000312481 PPP1R2P3Q6NXS1 205 aa10.05□□□□□ -0.8
COL6A5-202ENST00000312481 PXDNLA1KZ92 1463 aa10.05□□□□□ -0.8
COL6A5-202ENST00000312481 BRD3Q15059 726 aa10.05□□□□□ -0.8
COL6A5-202ENST00000312481 MCMDC2Q4G0Z9 681 aa10.05□□□□□ -0.8
COL6A5-202ENST00000312481 NBPF11Q86T75 865 aa10.05□□□□□ -0.8
COL6A5-202ENST00000312481 TMX3Q96JJ7 454 aa10.05□□□□□ -0.8
COL6A5-202ENST00000312481 CTAGE15A4D2H0 777 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms