RNA–Protein interactions for RNA: ENST00000309052.8

LCLAT1-201, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene LCLAT1, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-201ENST00000309052 CCDC144CPQ8IYA2 1237 aa10.3□□□□□ -0.76
LCLAT1-201ENST00000309052 PIBF1Q8WXW3 757 aa10.3□□□□□ -0.76
LCLAT1-201ENST00000309052 CELF1Q92879 486 aaKnown RBP10.29□□□□□ -0.76
LCLAT1-201ENST00000309052 RAD21O60216 631 aa10.29□□□□□ -0.76
LCLAT1-201ENST00000309052 CEBPZQ03701 1054 aaKnown RBP10.29□□□□□ -0.76
LCLAT1-201ENST00000309052 ATG9AQ7Z3C6 839 aa10.29□□□□□ -0.76
LCLAT1-201ENST00000309052 VSIG10Q8N0Z9 540 aa10.29□□□□□ -0.76
LCLAT1-201ENST00000309052 AKAP2Q9Y2D5 859 aa10.29□□□□□ -0.76
LCLAT1-201ENST00000309052 RGPD1P0DJD0 1748 aa10.29□□□□□ -0.76
LCLAT1-201ENST00000309052 BLOC1S2Q6QNY1 142 aa10.29□□□□□ -0.76
LCLAT1-201ENST00000309052 BCL9O00512 1426 aa10.28□□□□□ -0.76
LCLAT1-201ENST00000309052 GUCY1B3Q02153 619 aa10.28□□□□□ -0.76
LCLAT1-201ENST00000309052 CNBD1Q8NA66 436 aa10.28□□□□□ -0.76
LCLAT1-201ENST00000309052 RPGRQ92834 1020 aaKnown RBP10.28□□□□□ -0.76
LCLAT1-201ENST00000309052 TMX3Q96JJ7 454 aa10.28□□□□□ -0.76
LCLAT1-201ENST00000309052 PDRG1Q9NUG6 133 aa10.28□□□□□ -0.76
LCLAT1-201ENST00000309052 CYP46A1Q9Y6A2 500 aa10.28□□□□□ -0.76
LCLAT1-201ENST00000309052 A0A0G2JLW4 131 aa10.28□□□□□ -0.76
LCLAT1-201ENST00000309052 RXRAP19793 462 aa10.28□□□□□ -0.76
LCLAT1-201ENST00000309052 RNF20Q5VTR2 975 aa10.28□□□□□ -0.76
LCLAT1-201ENST00000309052 ERBB4Q15303 1308 aa10.28□□□□□ -0.76
LCLAT1-201ENST00000309052 RFX5P48382 616 aaPredicted RBP10.28□□□□□ -0.76
LCLAT1-201ENST00000309052 COL9A3Q14050 684 aaPredicted RBP10.28□□□□□ -0.76
LCLAT1-201ENST00000309052 AIDAQ96BJ3 306 aa10.28□□□□□ -0.76
LCLAT1-201ENST00000309052 LRRC4BQ9NT99 713 aa10.28□□□□□ -0.76
LCLAT1-201ENST00000309052 TTC41PQ6P2S7 1318 aa10.27□□□□□ -0.76
LCLAT1-201ENST00000309052 TRPM3Q9HCF6 1732 aaPredicted RBP10.27□□□□□ -0.76
LCLAT1-201ENST00000309052 GOLGA6L22H0YM25 854 aa10.27□□□□□ -0.76
LCLAT1-201ENST00000309052 PLCB2Q00722 1185 aa10.27□□□□□ -0.76
LCLAT1-201ENST00000309052 MTX1Q13505 466 aa10.27□□□□□ -0.76
LCLAT1-201ENST00000309052 CDC5LQ99459 802 aaKnown RBP10.27□□□□□ -0.76
LCLAT1-201ENST00000309052 SMC3Q9UQE7 1217 aa10.27□□□□□ -0.76
LCLAT1-201ENST00000309052 COL15A1P39059 1388 aa10.27□□□□□ -0.77
LCLAT1-201ENST00000309052 CAMTA2O94983 1202 aa10.27□□□□□ -0.77
LCLAT1-201ENST00000309052 SLC5A1P13866 664 aa10.27□□□□□ -0.77
LCLAT1-201ENST00000309052 DEFB132Q7Z7B7 95 aa10.27□□□□□ -0.77
LCLAT1-201ENST00000309052 MAGEB6Q8N7X4 407 aa10.27□□□□□ -0.77
LCLAT1-201ENST00000309052 RBM25P49756 843 aaKnown RBP10.27□□□□□ -0.77
LCLAT1-201ENST00000309052 EN1Q05925 392 aaPredicted RBP10.27□□□□□ -0.77
LCLAT1-201ENST00000309052 SF3B2Q13435 895 aaKnown RBP10.27□□□□□ -0.77
LCLAT1-201ENST00000309052 CCDC102BQ68D86 513 aa10.27□□□□□ -0.77
LCLAT1-201ENST00000309052 STAP2Q9UGK3 403 aa10.27□□□□□ -0.77
LCLAT1-201ENST00000309052 CHRNDQ07001 517 aa10.27□□□□□ -0.77
LCLAT1-201ENST00000309052 KIF2CQ99661 725 aa10.27□□□□□ -0.77
LCLAT1-201ENST00000309052 RXRBP28702 533 aa10.26□□□□□ -0.77
LCLAT1-201ENST00000309052 AK2P54819 239 aa10.26□□□□□ -0.77
LCLAT1-201ENST00000309052 RALYLQ86SE5 291 aaKnown RBP10.26□□□□□ -0.77
LCLAT1-201ENST00000309052 INCENPQ9NQS7 918 aa10.26□□□□□ -0.77
LCLAT1-201ENST00000309052 SNX14Q9Y5W7 946 aa10.26□□□□□ -0.77
LCLAT1-201ENST00000309052 DDX49Q9Y6V7 483 aaKnown RBP10.26□□□□□ -0.77
LCLAT1-201ENST00000309052 PDE8BO95263 885 aa10.26□□□□□ -0.77
LCLAT1-201ENST00000309052 TDO2P48775 406 aa10.26□□□□□ -0.77
LCLAT1-201ENST00000309052 CREB3L3Q68CJ9 461 aa10.26□□□□□ -0.77
LCLAT1-201ENST00000309052 SAMD1Q6SPF0 538 aaPredicted RBP10.26□□□□□ -0.77
LCLAT1-201ENST00000309052 OLFM4Q6UX06 510 aa10.26□□□□□ -0.77
LCLAT1-201ENST00000309052 BARGINQ6ZT62 677 aa10.26□□□□□ -0.77
LCLAT1-201ENST00000309052 BRF1Q92994 677 aa10.26□□□□□ -0.77
LCLAT1-201ENST00000309052 OSBPL3Q9H4L5 887 aa10.26□□□□□ -0.77
LCLAT1-201ENST00000309052 ALS2Q96Q42 1657 aa10.26□□□□□ -0.77
LCLAT1-201ENST00000309052 CASP7P55210 303 aa10.26□□□□□ -0.77
LCLAT1-201ENST00000309052 FNBP4Q8N3X1 1017 aaPredicted RBP10.26□□□□□ -0.77
LCLAT1-201ENST00000309052 ZKSCAN3Q9BRR0 538 aa10.26□□□□□ -0.77
LCLAT1-201ENST00000309052 PRPF40AO75400 957 aaKnown RBP10.26□□□□□ -0.77
LCLAT1-201ENST00000309052 TXNRD1Q16881 649 aa10.26□□□□□ -0.77
LCLAT1-201ENST00000309052 TNPO1Q92973 898 aaKnown RBP10.26□□□□□ -0.77
LCLAT1-201ENST00000309052 CCDC171Q6TFL3 1326 aa10.26□□□□□ -0.77
LCLAT1-201ENST00000309052 PRDM1O75626 825 aa10.25□□□□□ -0.77
LCLAT1-201ENST00000309052 FAM173BQ6P4H8 233 aa10.25□□□□□ -0.77
LCLAT1-201ENST00000309052 NFXL1Q6ZNB6 911 aa10.25□□□□□ -0.77
LCLAT1-201ENST00000309052 MARF1Q9Y4F3 1742 aaKnown RBP10.25□□□□□ -0.77
LCLAT1-201ENST00000309052 FIBPO43427 364 aa10.25□□□□□ -0.77
LCLAT1-201ENST00000309052 RPS8P62241 208 aaKnown RBP10.25□□□□□ -0.77
LCLAT1-201ENST00000309052 MCMDC2Q4G0Z9 681 aa10.25□□□□□ -0.77
LCLAT1-201ENST00000309052 CAVIN4Q5BKX8 364 aa10.25□□□□□ -0.77
LCLAT1-201ENST00000309052 TMX4Q9H1E5 349 aaPredicted RBP10.25□□□□□ -0.77
LCLAT1-201ENST00000309052 ATP5JP18859 108 aa10.25□□□□□ -0.77
LCLAT1-201ENST00000309052 KBTBD3Q8NAB2 608 aa10.25□□□□□ -0.77
LCLAT1-201ENST00000309052 TRDNQ13061 729 aa10.25□□□□□ -0.77
LCLAT1-201ENST00000309052 NFIXQ14938 502 aa10.25□□□□□ -0.77
LCLAT1-201ENST00000309052 RABL6Q3YEC7 729 aaPredicted RBP10.25□□□□□ -0.77
LCLAT1-201ENST00000309052 ARMT1Q9H993 441 aa10.25□□□□□ -0.77
LCLAT1-201ENST00000309052 GPHNQ9NQX3 736 aaPredicted RBP10.25□□□□□ -0.77
LCLAT1-201ENST00000309052 ATP2B1P20020 1258 aa10.24□□□□□ -0.77
LCLAT1-201ENST00000309052 MCAMP43121 646 aa10.24□□□□□ -0.77
LCLAT1-201ENST00000309052 GBP4Q96PP9 640 aa10.24□□□□□ -0.77
LCLAT1-201ENST00000309052 KLRK1P26718 216 aa10.24□□□□□ -0.77
LCLAT1-201ENST00000309052 PARP10Q53GL7 1025 aa10.24□□□□□ -0.77
LCLAT1-201ENST00000309052 FAM184AQ8NB25 1140 aa10.24□□□□□ -0.77
LCLAT1-201ENST00000309052 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.24□□□□□ -0.77
LCLAT1-201ENST00000309052 PUS7LQ9H0K6 701 aaKnown RBP10.24□□□□□ -0.77
LCLAT1-201ENST00000309052 SPATA31A6Q5VVP1 1343 aa10.24□□□□□ -0.77
LCLAT1-201ENST00000309052 XIRP1Q702N8 1843 aaKnown RBP10.24□□□□□ -0.77
LCLAT1-201ENST00000309052 RPS6KA4O75676 772 aa10.24□□□□□ -0.77
LCLAT1-201ENST00000309052 CYP7A1P22680 504 aa10.24□□□□□ -0.77
LCLAT1-201ENST00000309052 OSBP2Q969R2 916 aa10.24□□□□□ -0.77
LCLAT1-201ENST00000309052 NCOA5Q9HCD5 579 aaKnown RBP10.24□□□□□ -0.77
LCLAT1-201ENST00000309052 HIP1O00291 1037 aa10.24□□□□□ -0.77
LCLAT1-201ENST00000309052 SDR42E1Q8WUS8 393 aa10.23□□□□□ -0.77
LCLAT1-201ENST00000309052 PUM3Q15397 648 aaKnown RBP10.23□□□□□ -0.77
LCLAT1-201ENST00000309052 ZNF34Q8IZ26 560 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms