RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 CDC37L1Q7L3B6 337 aa12.55□□□□□ -0.4
MUC4-201ENST00000308466 NUTM2AQ8IVF1 878 aaPredicted RBP12.55□□□□□ -0.4
MUC4-201ENST00000308466 CCDC82Q8N4S0 544 aa12.55□□□□□ -0.4
MUC4-201ENST00000308466 HMGB1P09429 215 aaKnown RBP12.55□□□□□ -0.4
MUC4-201ENST00000308466 ZNF589Q86UQ0 364 aaPredicted RBP12.55□□□□□ -0.4
MUC4-201ENST00000308466 ZSWIM6Q9HCJ5 1215 aa12.55□□□□□ -0.4
MUC4-201ENST00000308466 ZKSCAN5Q9Y2L8 839 aa12.55□□□□□ -0.4
MUC4-201ENST00000308466 ZNF213O14771 459 aa12.54□□□□□ -0.4
MUC4-201ENST00000308466 FILIP1Q7Z7B0 1213 aa12.54□□□□□ -0.4
MUC4-201ENST00000308466 HELBQ8NG08 1087 aaPredicted RBP12.54□□□□□ -0.4
MUC4-201ENST00000308466 PATL2C9JE40 543 aaKnown RBP12.54□□□□□ -0.4
MUC4-201ENST00000308466 ADAMTS2O95450 1211 aa12.54□□□□□ -0.4
MUC4-201ENST00000308466 CCDC144CPQ8IYA2 1237 aa12.54□□□□□ -0.4
MUC4-201ENST00000308466 MAP4K1Q92918 833 aa12.54□□□□□ -0.4
MUC4-201ENST00000308466 TM6SF1Q9BZW5 370 aa12.54□□□□□ -0.4
MUC4-201ENST00000308466 NCOA5Q9HCD5 579 aaKnown RBP12.54□□□□□ -0.4
MUC4-201ENST00000308466 MTMR6Q9Y217 621 aa12.54□□□□□ -0.4
MUC4-201ENST00000308466 TMEM94Q12767 1356 aa12.53□□□□□ -0.4
MUC4-201ENST00000308466 CYP27B1O15528 508 aa12.53□□□□□ -0.4
MUC4-201ENST00000308466 EPB41L2O43491 1005 aaKnown RBP12.53□□□□□ -0.4
MUC4-201ENST00000308466 ATP5JP18859 108 aa12.53□□□□□ -0.4
MUC4-201ENST00000308466 CCDC94Q9BW85 323 aaPredicted RBP12.53□□□□□ -0.4
MUC4-201ENST00000308466 ERICH2A1L162 156 aa12.53□□□□□ -0.4
MUC4-201ENST00000308466 GOLGA8BA8MQT2 603 aa12.53□□□□□ -0.4
MUC4-201ENST00000308466 EYA2O00167 538 aa12.53□□□□□ -0.4
MUC4-201ENST00000308466 CYP2E1P05181 493 aaPredicted RBP12.53□□□□□ -0.4
MUC4-201ENST00000308466 AIDAQ96BJ3 306 aa12.53□□□□□ -0.4
MUC4-201ENST00000308466 C8orf76Q96K31 380 aa12.53□□□□□ -0.4
MUC4-201ENST00000308466 ABCF2Q9UG63 623 aa12.53□□□□□ -0.4
MUC4-201ENST00000308466 NRKQ7Z2Y5 1582 aa12.53□□□□□ -0.4
MUC4-201ENST00000308466 ZNF165P49910 485 aa12.53□□□□□ -0.4
MUC4-201ENST00000308466 HMGN5P82970 282 aaKnown RBP12.53□□□□□ -0.4
MUC4-201ENST00000308466 NPHP4O75161 1426 aaPredicted RBP12.53□□□□□ -0.4
MUC4-201ENST00000308466 ANKRD18BA2A2Z9 1011 aa12.52□□□□□ -0.4
MUC4-201ENST00000308466 DMTNQ08495 405 aa12.52□□□□□ -0.4
MUC4-201ENST00000308466 SLFNL1Q499Z3 407 aa12.52□□□□□ -0.4
MUC4-201ENST00000308466 LRRC24Q50LG9 513 aa12.52□□□□□ -0.4
MUC4-201ENST00000308466 KBTBD3Q8NAB2 608 aa12.52□□□□□ -0.4
MUC4-201ENST00000308466 PPP1R9BQ96SB3 815 aa12.52□□□□□ -0.4
MUC4-201ENST00000308466 ATP2B3Q16720 1220 aa12.52□□□□□ -0.41
MUC4-201ENST00000308466 DHX32Q7L7V1 743 aaKnown RBP12.52□□□□□ -0.41
MUC4-201ENST00000308466 DIP2AQ14689 1571 aa12.52□□□□□ -0.41
MUC4-201ENST00000308466 PTPN12Q05209 780 aaKnown RBP12.52□□□□□ -0.41
MUC4-201ENST00000308466 SAFBQ15424 915 aaKnown RBP eCLIP12.52□□□□□ -0.41
MUC4-201ENST00000308466 BICDL1Q6ZP65 573 aa12.52□□□□□ -0.41
MUC4-201ENST00000308466 DNAJC10Q8IXB1 793 aa12.52□□□□□ -0.41
MUC4-201ENST00000308466 COPRSQ9NQ92 184 aa12.52□□□□□ -0.41
MUC4-201ENST00000308466 ORC3Q9UBD5 711 aaPredicted RBP12.52□□□□□ -0.41
MUC4-201ENST00000308466 ITSN1Q15811 1721 aa12.52□□□□□ -0.41
MUC4-201ENST00000308466 KLF18A0A0U1RQI7 1052 aa12.51□□□□□ -0.41
MUC4-201ENST00000308466 EXOC5O00471 708 aa12.51□□□□□ -0.41
MUC4-201ENST00000308466 DYNC1I1O14576 645 aa12.51□□□□□ -0.41
MUC4-201ENST00000308466 TAF5LO75529 589 aa12.51□□□□□ -0.41
MUC4-201ENST00000308466 MTX1Q13505 466 aa12.51□□□□□ -0.41
MUC4-201ENST00000308466 NECTIN1Q15223 517 aa12.51□□□□□ -0.41
MUC4-201ENST00000308466 ANO6Q4KMQ2 910 aa12.51□□□□□ -0.41
MUC4-201ENST00000308466 FSIP1Q8NA03 581 aa12.51□□□□□ -0.41
MUC4-201ENST00000308466 NUP133Q8WUM0 1156 aa12.51□□□□□ -0.41
MUC4-201ENST00000308466 DDX19AQ9NUU7 478 aaKnown RBP12.51□□□□□ -0.41
MUC4-201ENST00000308466 NCOA3Q9Y6Q9 1424 aa12.51□□□□□ -0.41
MUC4-201ENST00000308466 RNF113AO15541 343 aaKnown RBP12.51□□□□□ -0.41
MUC4-201ENST00000308466 UVSSAQ2YD98 709 aa12.51□□□□□ -0.41
MUC4-201ENST00000308466 ZSCAN25Q6NSZ9 544 aa12.51□□□□□ -0.41
MUC4-201ENST00000308466 CCAR1Q8IX12 1150 aaKnown RBP12.51□□□□□ -0.41
MUC4-201ENST00000308466 LRP2BPQ9P2M1 347 aa12.51□□□□□ -0.41
MUC4-201ENST00000308466 SMC2O95347 1197 aa12.51□□□□□ -0.41
MUC4-201ENST00000308466 TPD52L1Q16890 204 aaPredicted RBP12.51□□□□□ -0.41
MUC4-201ENST00000308466 CLEC17AQ6ZS10 378 aa12.51□□□□□ -0.41
MUC4-201ENST00000308466 PUS3Q9BZE2 481 aaKnown RBP12.51□□□□□ -0.41
MUC4-201ENST00000308466 MTMR7Q9Y216 660 aa12.51□□□□□ -0.41
MUC4-201ENST00000308466 PTPDC1A2A3K4 754 aa12.5□□□□□ -0.41
MUC4-201ENST00000308466 CHGBP05060 677 aa12.5□□□□□ -0.41
MUC4-201ENST00000308466 TDO2P48775 406 aa12.5□□□□□ -0.41
MUC4-201ENST00000308466 SLC9C2Q5TAH2 1124 aa12.5□□□□□ -0.41
MUC4-201ENST00000308466 LUZP1Q86V48 1076 aa12.5□□□□□ -0.41
MUC4-201ENST00000308466 NAT10Q9H0A0 1025 aaKnown RBP12.5□□□□□ -0.41
MUC4-201ENST00000308466 IQSEC3Q9UPP2 1182 aaPredicted RBP12.5□□□□□ -0.41
MUC4-201ENST00000308466 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.5□□□□□ -0.41
MUC4-201ENST00000308466 PCDH11XQ9BZA7 1347 aa12.5□□□□□ -0.41
MUC4-201ENST00000308466 PCDH11YQ9BZA8 1340 aa12.5□□□□□ -0.41
MUC4-201ENST00000308466 AK9Q5TCS8 1911 aa12.5□□□□□ -0.41
MUC4-201ENST00000308466 BIN1O00499 593 aa12.5□□□□□ -0.41
MUC4-201ENST00000308466 MICU3Q86XE3 530 aa12.5□□□□□ -0.41
MUC4-201ENST00000308466 PDCL2Q8N4E4 241 aa12.5□□□□□ -0.41
MUC4-201ENST00000308466 DNAJC25Q9H1X3 360 aa12.5□□□□□ -0.41
MUC4-201ENST00000308466 NOL7Q9UMY1 257 aaKnown RBP12.5□□□□□ -0.41
MUC4-201ENST00000308466 TYRO3Q06418 890 aa12.5□□□□□ -0.41
MUC4-201ENST00000308466 TTLL5Q6EMB2 1281 aa12.5□□□□□ -0.41
MUC4-201ENST00000308466 ISM2Q6H9L7 571 aa12.5□□□□□ -0.41
MUC4-201ENST00000308466 C17orf53Q8N3J3 647 aaPredicted RBP12.5□□□□□ -0.41
MUC4-201ENST00000308466 CCDC191Q8NCU4 936 aa12.5□□□□□ -0.41
MUC4-201ENST00000308466 CEMIPQ8WUJ3 1361 aa12.49□□□□□ -0.41
MUC4-201ENST00000308466 OTUD7BQ6GQQ9 843 aa12.49□□□□□ -0.41
MUC4-201ENST00000308466 TTC6Q86TZ1 520 aa12.49□□□□□ -0.41
MUC4-201ENST00000308466 SALL3Q9BXA9 1300 aa12.49□□□□□ -0.41
MUC4-201ENST00000308466 TPM3P06753 285 aa12.49□□□□□ -0.41
MUC4-201ENST00000308466 LIG1P18858 919 aa12.49□□□□□ -0.41
MUC4-201ENST00000308466 RXRAP19793 462 aa12.49□□□□□ -0.41
MUC4-201ENST00000308466 RASSF8Q8NHQ8 419 aa12.49□□□□□ -0.41
MUC4-201ENST00000308466 TRIM34Q9BYJ4 488 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms