RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 HDAC1Q13547 482 aaPredicted RBP10.89□□□□□ -0.67
PTPRE-202ENST00000306042 CUL5Q93034 780 aa10.89□□□□□ -0.67
PTPRE-202ENST00000306042 SUCLG2Q96I99 432 aa10.89□□□□□ -0.67
PTPRE-202ENST00000306042 KAT14Q9H8E8 782 aa10.89□□□□□ -0.67
PTPRE-202ENST00000306042 MROH5Q6ZUA9 1318 aa10.89□□□□□ -0.67
PTPRE-202ENST00000306042 TSPY3P0CV98 308 aa10.89□□□□□ -0.67
PTPRE-202ENST00000306042 TSPY8P0CW00 308 aa10.89□□□□□ -0.67
PTPRE-202ENST00000306042 TIMM10P62072 90 aa10.89□□□□□ -0.67
PTPRE-202ENST00000306042 CHMP5Q9NZZ3 219 aa10.89□□□□□ -0.67
PTPRE-202ENST00000306042 RICTORQ6R327 1708 aa10.89□□□□□ -0.67
PTPRE-202ENST00000306042 DIP2AQ14689 1571 aa10.89□□□□□ -0.67
PTPRE-202ENST00000306042 KRT18P05783 430 aaKnown RBP10.88□□□□□ -0.67
PTPRE-202ENST00000306042 MAGEB6Q8N7X4 407 aa10.88□□□□□ -0.67
PTPRE-202ENST00000306042 LPIN2Q92539 896 aa10.88□□□□□ -0.67
PTPRE-202ENST00000306042 PLEKHF1Q96S99 279 aa10.88□□□□□ -0.67
PTPRE-202ENST00000306042 NBPF7P0C2Y1 421 aaPredicted RBP10.88□□□□□ -0.67
PTPRE-202ENST00000306042 MCM9Q9NXL9 1143 aa10.88□□□□□ -0.67
PTPRE-202ENST00000306042 SRP68Q9UHB9 627 aaKnown RBP10.88□□□□□ -0.67
PTPRE-202ENST00000306042 TNNQ9UQP3 1299 aa10.88□□□□□ -0.67
PTPRE-202ENST00000306042 CPS1P31327 1500 aa10.88□□□□□ -0.67
PTPRE-202ENST00000306042 MIGA1Q8NAN2 632 aa10.88□□□□□ -0.67
PTPRE-202ENST00000306042 KLHDC4Q8TBB5 520 aa10.88□□□□□ -0.67
PTPRE-202ENST00000306042 ANKRD20A12PQ8NF67 263 aa10.88□□□□□ -0.67
PTPRE-202ENST00000306042 CNKSR2Q8WXI2 1034 aa10.88□□□□□ -0.67
PTPRE-202ENST00000306042 ZNF396Q96N95 335 aaPredicted RBP10.88□□□□□ -0.67
PTPRE-202ENST00000306042 PSDA5PKW4 1024 aaPredicted RBP10.87□□□□□ -0.67
PTPRE-202ENST00000306042 KIF5BP33176 963 aa10.87□□□□□ -0.67
PTPRE-202ENST00000306042 ATG3Q9NT62 314 aa10.87□□□□□ -0.67
PTPRE-202ENST00000306042 GNAT2P19087 354 aa10.87□□□□□ -0.67
PTPRE-202ENST00000306042 ATP2B4P23634 1241 aa10.87□□□□□ -0.67
PTPRE-202ENST00000306042 TNIP1Q15025 636 aa10.87□□□□□ -0.67
PTPRE-202ENST00000306042 STK38Q15208 465 aa10.87□□□□□ -0.67
PTPRE-202ENST00000306042 BARGINQ6ZT62 677 aa10.87□□□□□ -0.67
PTPRE-202ENST00000306042 CCDC82Q8N4S0 544 aa10.87□□□□□ -0.67
PTPRE-202ENST00000306042 JMYQ8N9B5 988 aa10.87□□□□□ -0.67
PTPRE-202ENST00000306042 TBC1D22AQ8WUA7 517 aa10.87□□□□□ -0.67
PTPRE-202ENST00000306042 SPATA31A5Q5VU36 1347 aa10.87□□□□□ -0.67
PTPRE-202ENST00000306042 SPATA31A7Q8IWB4 1347 aa10.87□□□□□ -0.67
PTPRE-202ENST00000306042 GOLGA6L19H0YKK7 550 aa10.87□□□□□ -0.67
PTPRE-202ENST00000306042 ADRA2BP18089 450 aa10.87□□□□□ -0.67
PTPRE-202ENST00000306042 PDE1AP54750 535 aa10.87□□□□□ -0.67
PTPRE-202ENST00000306042 TTC6Q86TZ1 520 aa10.87□□□□□ -0.67
PTPRE-202ENST00000306042 TEX11Q8IYF3 940 aa10.87□□□□□ -0.67
PTPRE-202ENST00000306042 RLBP1P12271 317 aa10.87□□□□□ -0.67
PTPRE-202ENST00000306042 CHMP4BP1P59074 171 aa10.87□□□□□ -0.67
PTPRE-202ENST00000306042 DLGAP5Q15398 846 aa10.87□□□□□ -0.67
PTPRE-202ENST00000306042 CCDC178Q5BJE1 867 aa10.87□□□□□ -0.67
PTPRE-202ENST00000306042 DALRD3Q5D0E6 543 aaKnown RBP10.87□□□□□ -0.67
PTPRE-202ENST00000306042 QRICH2Q9H0J4 1663 aa10.87□□□□□ -0.67
PTPRE-202ENST00000306042 TTC41PQ6P2S7 1318 aa10.87□□□□□ -0.67
PTPRE-202ENST00000306042 ERVV-1B6SEH8 477 aa10.86□□□□□ -0.67
PTPRE-202ENST00000306042 TMEM67Q5HYA8 995 aa10.86□□□□□ -0.67
PTPRE-202ENST00000306042 SPON1Q9HCB6 807 aa10.86□□□□□ -0.67
PTPRE-202ENST00000306042 NCOA7Q8NI08 942 aa10.86□□□□□ -0.67
PTPRE-202ENST00000306042 ESR2Q92731 530 aa10.86□□□□□ -0.67
PTPRE-202ENST00000306042 KDRP35968 1356 aa10.86□□□□□ -0.67
PTPRE-202ENST00000306042 SSH2Q76I76 1423 aa10.86□□□□□ -0.67
PTPRE-202ENST00000306042 MCMDC2Q4G0Z9 681 aa10.86□□□□□ -0.67
PTPRE-202ENST00000306042 TTC22Q5TAA0 569 aa10.86□□□□□ -0.67
PTPRE-202ENST00000306042 LARP1BQ659C4 914 aaKnown RBP10.86□□□□□ -0.67
PTPRE-202ENST00000306042 XAGE2Q96GT9 111 aa10.86□□□□□ -0.67
PTPRE-202ENST00000306042 MPHOSPH6Q99547 160 aaKnown RBP10.86□□□□□ -0.67
PTPRE-202ENST00000306042 UPF3BQ9BZI7 483 aaKnown RBP10.86□□□□□ -0.67
PTPRE-202ENST00000306042 PCDHB15Q9Y5E8 787 aa10.86□□□□□ -0.67
PTPRE-202ENST00000306042 PPEF1O14829 653 aaPredicted RBP10.86□□□□□ -0.67
PTPRE-202ENST00000306042 TSR1Q2NL82 804 aaKnown RBP10.86□□□□□ -0.67
PTPRE-202ENST00000306042 TMC4Q7Z404 712 aa10.86□□□□□ -0.67
PTPRE-202ENST00000306042 NOC3LQ8WTT2 800 aaKnown RBP10.86□□□□□ -0.67
PTPRE-202ENST00000306042 PRAMEF22A3QJZ6 481 aa10.85□□□□□ -0.67
PTPRE-202ENST00000306042 GTF2IP78347 998 aa10.85□□□□□ -0.67
PTPRE-202ENST00000306042 PROSER3Q2NL68 480 aa10.85□□□□□ -0.67
PTPRE-202ENST00000306042 CEP89Q96ST8 783 aa10.85□□□□□ -0.67
PTPRE-202ENST00000306042 EHMT1Q9H9B1 1298 aa10.85□□□□□ -0.67
PTPRE-202ENST00000306042 VAT1LQ9HCJ6 419 aa10.85□□□□□ -0.67
PTPRE-202ENST00000306042 GOLGA8AA7E2F4 631 aa10.85□□□□□ -0.67
PTPRE-202ENST00000306042 GOLGA8BA8MQT2 603 aa10.85□□□□□ -0.67
PTPRE-202ENST00000306042 RNF113AO15541 343 aaKnown RBP10.85□□□□□ -0.67
PTPRE-202ENST00000306042 NUCB1Q02818 461 aa10.85□□□□□ -0.67
PTPRE-202ENST00000306042 TNNI3KQ59H18 835 aa10.85□□□□□ -0.67
PTPRE-202ENST00000306042 SDF4Q9BRK5 362 aa10.85□□□□□ -0.67
PTPRE-202ENST00000306042 KRT23Q9C075 422 aa10.85□□□□□ -0.67
PTPRE-202ENST00000306042 DCTPP1Q9H773 170 aa10.85□□□□□ -0.67
PTPRE-202ENST00000306042 ZBTB40Q9NUA8 1239 aa10.85□□□□□ -0.67
PTPRE-202ENST00000306042 FPGT-TNNI3KV9GXZ4 949 aa10.85□□□□□ -0.67
PTPRE-202ENST00000306042 NCAPD2Q15021 1401 aa10.85□□□□□ -0.67
PTPRE-202ENST00000306042 R3HDM1Q15032 1099 aaKnown RBP10.85□□□□□ -0.67
PTPRE-202ENST00000306042 CEBPZQ03701 1054 aaKnown RBP10.85□□□□□ -0.67
PTPRE-202ENST00000306042 CLEC4GQ6UXB4 293 aa10.85□□□□□ -0.67
PTPRE-202ENST00000306042 PCMTD1Q96MG8 357 aaPredicted RBP10.85□□□□□ -0.67
PTPRE-202ENST00000306042 TECPR2O15040 1411 aa10.84□□□□□ -0.67
PTPRE-202ENST00000306042 BBOX1O75936 387 aa10.84□□□□□ -0.67
PTPRE-202ENST00000306042 BMP2KLQ5H9B9 411 aa10.84□□□□□ -0.67
PTPRE-202ENST00000306042 TTLL6Q8N841 843 aa10.84□□□□□ -0.67
PTPRE-202ENST00000306042 CNNM2Q9H8M5 875 aa10.84□□□□□ -0.67
PTPRE-202ENST00000306042 PICK1Q9NRD5 415 aa10.84□□□□□ -0.67
PTPRE-202ENST00000306042 TSHZ2Q9NRE2 1034 aa10.84□□□□□ -0.67
PTPRE-202ENST00000306042 REREQ9P2R6 1566 aa10.84□□□□□ -0.67
PTPRE-202ENST00000306042 DDX11Q96FC9 970 aa10.84□□□□□ -0.67
PTPRE-202ENST00000306042 ZBTB7BO15156 539 aaPredicted RBP10.84□□□□□ -0.67
PTPRE-202ENST00000306042 IGHDP01880 384 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms