RNA–Protein interactions for RNA: ENST00000303391.10

MECP2-201, Transcript of methyl-CpG binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MECP2, Length 10,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-201ENST00000303391 VCX3AQ9NNX9 186 aa12.36□□□□□ -0.43
MECP2-201ENST00000303391 SPATS2LQ9NUQ6 558 aaKnown RBP12.36□□□□□ -0.43
MECP2-201ENST00000303391 UBA7P41226 1012 aa12.36□□□□□ -0.43
MECP2-201ENST00000303391 DMTNQ08495 405 aa12.36□□□□□ -0.43
MECP2-201ENST00000303391 GMNNO75496 209 aa12.36□□□□□ -0.43
MECP2-201ENST00000303391 PRIM1P49642 420 aaKnown RBP12.36□□□□□ -0.43
MECP2-201ENST00000303391 EVCP57679 992 aa12.36□□□□□ -0.43
MECP2-201ENST00000303391 NUTM2DQ5VT03 806 aaPredicted RBP12.36□□□□□ -0.43
MECP2-201ENST00000303391 NUTM2AQ8IVF1 878 aaPredicted RBP12.36□□□□□ -0.43
MECP2-201ENST00000303391 AMOTQ4VCS5 1084 aa12.36□□□□□ -0.43
MECP2-201ENST00000303391 FERMT2Q96AC1 680 aa12.36□□□□□ -0.43
MECP2-201ENST00000303391 ACTN4O43707 911 aaKnown RBP12.35□□□□□ -0.43
MECP2-201ENST00000303391 NEDD9Q14511 834 aa12.35□□□□□ -0.43
MECP2-201ENST00000303391 GBP5Q96PP8 586 aa12.35□□□□□ -0.43
MECP2-201ENST00000303391 MACROD2A1Z1Q3 448 aa12.35□□□□□ -0.43
MECP2-201ENST00000303391 PPP2R5EQ16537 467 aa12.35□□□□□ -0.43
MECP2-201ENST00000303391 GIMAP6Q6P9H5 292 aa12.35□□□□□ -0.43
MECP2-201ENST00000303391 BICDL1Q6ZP65 573 aa12.35□□□□□ -0.43
MECP2-201ENST00000303391 RNF10Q8N5U6 811 aaKnown RBP12.35□□□□□ -0.43
MECP2-201ENST00000303391 EFCC1Q9HA90 598 aa12.35□□□□□ -0.43
MECP2-201ENST00000303391 NLRP5P59047 1200 aa12.35□□□□□ -0.43
MECP2-201ENST00000303391 RPUSD2Q8IZ73 545 aaKnown RBP12.35□□□□□ -0.43
MECP2-201ENST00000303391 TMTC2Q8N394 836 aa12.35□□□□□ -0.43
MECP2-201ENST00000303391 MTUS1Q9ULD2 1270 aa12.35□□□□□ -0.43
MECP2-201ENST00000303391 F13A1P00488 732 aa12.35□□□□□ -0.43
MECP2-201ENST00000303391 NAPGQ99747 312 aaPredicted RBP12.35□□□□□ -0.43
MECP2-201ENST00000303391 ZNF622Q969S3 477 aaKnown RBP eCLIP12.35□□□□□ -0.436e-14■□□□□ 8.7
MECP2-201ENST00000303391 JPH4Q96JJ6 628 aa12.35□□□□□ -0.43
MECP2-201ENST00000303391 SSH1Q8WYL5 1049 aa12.35□□□□□ -0.43
MECP2-201ENST00000303391 CFAP65Q6ZU64 1925 aaKnown RBP12.34□□□□□ -0.43
MECP2-201ENST00000303391 PRC1O43663 620 aa12.34□□□□□ -0.43
MECP2-201ENST00000303391 TMX3Q96JJ7 454 aa12.34□□□□□ -0.43
MECP2-201ENST00000303391 FAN1Q9Y2M0 1017 aa12.34□□□□□ -0.43
MECP2-201ENST00000303391 GOLGA6BA6NDN3 693 aa12.34□□□□□ -0.43
MECP2-201ENST00000303391 VWA3BQ502W6 1294 aa12.34□□□□□ -0.43
MECP2-201ENST00000303391 Q9H521 79 aa12.34□□□□□ -0.43
MECP2-201ENST00000303391 CCDC42Q96M95 316 aa12.34□□□□□ -0.43
MECP2-201ENST00000303391 CABP2Q9NPB3 220 aa12.34□□□□□ -0.43
MECP2-201ENST00000303391 PPFIA2O75334 1257 aa12.34□□□□□ -0.43
MECP2-201ENST00000303391 GTF3C6Q969F1 213 aa12.34□□□□□ -0.43
MECP2-201ENST00000303391 TACO1Q9BSH4 297 aaKnown RBP12.34□□□□□ -0.43
MECP2-201ENST00000303391 ZSWIM4Q9H7M6 989 aa12.34□□□□□ -0.43
MECP2-201ENST00000303391 PABPN1LA6NDY0 278 aaKnown RBP12.34□□□□□ -0.43
MECP2-201ENST00000303391 ATP2C2O75185 946 aa12.34□□□□□ -0.43
MECP2-201ENST00000303391 SIL1Q9H173 461 aa12.34□□□□□ -0.43
MECP2-201ENST00000303391 ZNF500O60304 480 aaPredicted RBP12.34□□□□□ -0.43
MECP2-201ENST00000303391 MAP3K12Q12852 859 aa12.34□□□□□ -0.43
MECP2-201ENST00000303391 CUL5Q93034 780 aa12.34□□□□□ -0.43
MECP2-201ENST00000303391 NUF2Q9BZD4 464 aa12.34□□□□□ -0.43
MECP2-201ENST00000303391 NBPF7P0C2Y1 421 aaPredicted RBP12.33□□□□□ -0.43
MECP2-201ENST00000303391 ZSCAN26Q16670 478 aa12.33□□□□□ -0.43
MECP2-201ENST00000303391 SEC62Q99442 399 aaKnown RBP12.33□□□□□ -0.43
MECP2-201ENST00000303391 CFAP43Q8NDM7 1665 aa12.33□□□□□ -0.43
MECP2-201ENST00000303391 SELENOSQ9BQE4 189 aa12.33□□□□□ -0.44
MECP2-201ENST00000303391 PANK2Q9BZ23 570 aa12.33□□□□□ -0.44
MECP2-201ENST00000303391 RLBP1P12271 317 aa12.33□□□□□ -0.44
MECP2-201ENST00000303391 SLF2Q8IX21 1173 aa12.33□□□□□ -0.44
MECP2-201ENST00000303391 CPLX3Q8WVH0 158 aa12.33□□□□□ -0.44
MECP2-201ENST00000303391 ECHDC1Q9NTX5 307 aa12.33□□□□□ -0.44
MECP2-201ENST00000303391 SPG7Q9UQ90 795 aa12.33□□□□□ -0.44
MECP2-201ENST00000303391 DUSP27Q5VZP5 1158 aa12.33□□□□□ -0.44
MECP2-201ENST00000303391 DRC1Q96MC2 740 aa12.33□□□□□ -0.44
MECP2-201ENST00000303391 ATP8B1O43520 1251 aa12.33□□□□□ -0.44
MECP2-201ENST00000303391 GBP7Q8N8V2 638 aaPredicted RBP12.33□□□□□ -0.44
MECP2-201ENST00000303391 SPAG5Q96R06 1193 aa12.33□□□□□ -0.44
MECP2-201ENST00000303391 ZNF213O14771 459 aa12.33□□□□□ -0.44
MECP2-201ENST00000303391 CEP85LQ5SZL2 805 aa12.33□□□□□ -0.44
MECP2-201ENST00000303391 BAG1Q99933 345 aaPredicted RBP12.33□□□□□ -0.44
MECP2-201ENST00000303391 AKR1B15C9JRZ8 316 aaPredicted RBP12.32□□□□□ -0.44
MECP2-201ENST00000303391 IARSP41252 1262 aaKnown RBP12.32□□□□□ -0.44
MECP2-201ENST00000303391 AOPEPQ8N6M6 819 aa12.32□□□□□ -0.44
MECP2-201ENST00000303391 HSP90AA5PQ58FG0 334 aa12.32□□□□□ -0.44
MECP2-201ENST00000303391 AFAP1L2Q8N4X5 818 aa12.32□□□□□ -0.44
MECP2-201ENST00000303391 LRP2BPQ9P2M1 347 aa12.32□□□□□ -0.44
MECP2-201ENST00000303391 TRAF1Q13077 416 aa12.32□□□□□ -0.44
MECP2-201ENST00000303391 PHLDB3Q6NSJ2 640 aa12.32□□□□□ -0.44
MECP2-201ENST00000303391 SSX2IPQ9Y2D8 614 aa12.32□□□□□ -0.44
MECP2-201ENST00000303391 CALCOCO2Q13137 446 aa12.32□□□□□ -0.44
MECP2-201ENST00000303391 GCKP35557 465 aa12.32□□□□□ -0.44
MECP2-201ENST00000303391 MCUR1Q96AQ8 359 aa12.32□□□□□ -0.44
MECP2-201ENST00000303391 CNNM2Q9H8M5 875 aa12.32□□□□□ -0.44
MECP2-201ENST00000303391 UTP11Q9Y3A2 253 aaKnown RBP12.32□□□□□ -0.44
MECP2-201ENST00000303391 GOLGA8AA7E2F4 631 aa12.32□□□□□ -0.44
MECP2-201ENST00000303391 DNAJC8O75937 253 aaPredicted RBP12.32□□□□□ -0.44
MECP2-201ENST00000303391 NAIPQ13075 1403 aa12.32□□□□□ -0.44
MECP2-201ENST00000303391 RPRD2Q5VT52 1461 aaKnown RBP12.32□□□□□ -0.44
MECP2-201ENST00000303391 STAT6P42226 847 aa12.32□□□□□ -0.44
MECP2-201ENST00000303391 BIN1O00499 593 aa12.32□□□□□ -0.44
MECP2-201ENST00000303391 WDR78Q5VTH9 848 aa12.31□□□□□ -0.44
MECP2-201ENST00000303391 CNPY2Q9Y2B0 182 aa12.31□□□□□ -0.44
MECP2-201ENST00000303391 EPRSP07814 1512 aaKnown RBP12.31□□□□□ -0.44
MECP2-201ENST00000303391 SLMAPQ14BN4 828 aa12.31□□□□□ -0.44
MECP2-201ENST00000303391 NCOA7Q8NI08 942 aa12.31□□□□□ -0.44
MECP2-201ENST00000303391 GNAT3A8MTJ3 354 aa12.31□□□□□ -0.44
MECP2-201ENST00000303391 TRIM27P14373 513 aa12.31□□□□□ -0.44
MECP2-201ENST00000303391 TATP17735 454 aaPredicted RBP12.31□□□□□ -0.44
MECP2-201ENST00000303391 TPD52P55327 224 aaPredicted RBP12.31□□□□□ -0.44
MECP2-201ENST00000303391 METAP2P50579 478 aaKnown RBP eCLIP12.31□□□□□ -0.44
MECP2-201ENST00000303391 PAK2Q13177 524 aa12.31□□□□□ -0.44
MECP2-201ENST00000303391 EVI5O60447 810 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms