RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 TLR7Q9NYK1 1049 aaKnown RBP16.48■□□□□ 0.23
SDC2-201ENST00000302190 MED1Q15648 1581 aaPredicted RBP16.47■□□□□ 0.23
SDC2-201ENST00000302190 EIF4A1P60842 406 aaKnown RBP16.47■□□□□ 0.23
SDC2-201ENST00000302190 APOBRQ0VD83 1088 aa16.47■□□□□ 0.23
SDC2-201ENST00000302190 MAPK8IP2Q13387 824 aaPredicted RBP16.47■□□□□ 0.23
SDC2-201ENST00000302190 AMOTQ4VCS5 1084 aa16.47■□□□□ 0.23
SDC2-201ENST00000302190 CCDC158Q5M9N0 1113 aa16.47■□□□□ 0.23
SDC2-201ENST00000302190 OTUD7BQ6GQQ9 843 aa16.47■□□□□ 0.23
SDC2-201ENST00000302190 SSH3Q8TE77 659 aa16.47■□□□□ 0.23
SDC2-201ENST00000302190 MARF1Q9Y4F3 1742 aaKnown RBP16.47■□□□□ 0.23
SDC2-201ENST00000302190 TERF1P54274 439 aa16.47■□□□□ 0.23
SDC2-201ENST00000302190 LINS1Q8NG48 757 aa16.47■□□□□ 0.23
SDC2-201ENST00000302190 SERPINC1P01008 464 aa16.46■□□□□ 0.23
SDC2-201ENST00000302190 LIG1P18858 919 aa16.46■□□□□ 0.23
SDC2-201ENST00000302190 KRT32Q14532 448 aa16.46■□□□□ 0.23
SDC2-201ENST00000302190 CCAR1Q8IX12 1150 aaKnown RBP16.46■□□□□ 0.23
SDC2-201ENST00000302190 ZNF396Q96N95 335 aaPredicted RBP16.46■□□□□ 0.23
SDC2-201ENST00000302190 DBNDD2Q9BQY9 259 aa16.46■□□□□ 0.23
SDC2-201ENST00000302190 SOS2Q07890 1332 aaPredicted RBP16.46■□□□□ 0.23
SDC2-201ENST00000302190 A0A0D9SFI3 127 aa16.46■□□□□ 0.23
SDC2-201ENST00000302190 DLG5Q8TDM6 1919 aa16.46■□□□□ 0.22
SDC2-201ENST00000302190 RXRAP19793 462 aa16.46■□□□□ 0.22
SDC2-201ENST00000302190 AKAP17AQ02040 695 aaKnown RBP16.46■□□□□ 0.22
SDC2-201ENST00000302190 DMTNQ08495 405 aa16.46■□□□□ 0.22
SDC2-201ENST00000302190 NAT10Q9H0A0 1025 aaKnown RBP16.46■□□□□ 0.22
SDC2-201ENST00000302190 IBTKQ9P2D0 1353 aaPredicted RBP16.45■□□□□ 0.22
SDC2-201ENST00000302190 SLC27A2O14975 620 aa16.45■□□□□ 0.22
SDC2-201ENST00000302190 AKAP4Q5JQC9 854 aa16.45■□□□□ 0.22
SDC2-201ENST00000302190 FAM200AQ8TCP9 573 aa16.45■□□□□ 0.22
SDC2-201ENST00000302190 TPCN1Q9ULQ1 816 aa16.45■□□□□ 0.22
SDC2-201ENST00000302190 PXDNQ92626 1479 aa16.45■□□□□ 0.22
SDC2-201ENST00000302190 CEP57L1Q8IYX8 460 aa16.45■□□□□ 0.22
SDC2-201ENST00000302190 NUP133Q8WUM0 1156 aa16.45■□□□□ 0.22
SDC2-201ENST00000302190 LRMPQ12912 555 aa16.44■□□□□ 0.22
SDC2-201ENST00000302190 PAXIP1Q6ZW49 1069 aaPredicted RBP16.44■□□□□ 0.22
SDC2-201ENST00000302190 MCM5P33992 734 aa16.44■□□□□ 0.22
SDC2-201ENST00000302190 LRRFIP1Q32MZ4 808 aaKnown RBP16.44■□□□□ 0.22
SDC2-201ENST00000302190 MNS1Q8NEH6 495 aa16.44■□□□□ 0.22
SDC2-201ENST00000302190 ZNF594Q96JF6 807 aaPredicted RBP16.44■□□□□ 0.22
SDC2-201ENST00000302190 CCDC94Q9BW85 323 aaPredicted RBP16.44■□□□□ 0.22
SDC2-201ENST00000302190 NFAT5O94916 1531 aa16.44■□□□□ 0.22
SDC2-201ENST00000302190 RNMTO43148 476 aaKnown RBP16.43■□□□□ 0.22
SDC2-201ENST00000302190 TOM1O60784 492 aa16.43■□□□□ 0.22
SDC2-201ENST00000302190 TPM3P06753 285 aa16.43■□□□□ 0.22
SDC2-201ENST00000302190 VPS53Q5VIR6 699 aa16.43■□□□□ 0.22
SDC2-201ENST00000302190 C8orf37Q96NL8 207 aa16.43■□□□□ 0.22
SDC2-201ENST00000302190 AK9Q5TCS8 1911 aa16.43■□□□□ 0.22
SDC2-201ENST00000302190 GOLGA8BA8MQT2 603 aa16.43■□□□□ 0.22
SDC2-201ENST00000302190 BEND3Q5T5X7 828 aa16.43■□□□□ 0.22
SDC2-201ENST00000302190 C8orf76Q96K31 380 aa16.43■□□□□ 0.22
SDC2-201ENST00000302190 MARCKSP29966 332 aaPredicted RBP16.42■□□□□ 0.22
SDC2-201ENST00000302190 SLFNL1Q499Z3 407 aa16.42■□□□□ 0.22
SDC2-201ENST00000302190 FAM182BQ5T319 152 aa16.42■□□□□ 0.22
SDC2-201ENST00000302190 TTC6Q86TZ1 520 aa16.42■□□□□ 0.22
SDC2-201ENST00000302190 UTP14CQ5TAP6 766 aaKnown RBP16.42■□□□□ 0.22
SDC2-201ENST00000302190 MICU3Q86XE3 530 aa16.42■□□□□ 0.22
SDC2-201ENST00000302190 OSBPL3Q9H4L5 887 aa16.42■□□□□ 0.22
SDC2-201ENST00000302190 MTMR6Q9Y217 621 aa16.42■□□□□ 0.22
SDC2-201ENST00000302190 U3KPZ7 1027 aaPredicted RBP16.42■□□□□ 0.22
SDC2-201ENST00000302190 PTPN14Q15678 1187 aa16.41■□□□□ 0.22
SDC2-201ENST00000302190 CFAP100Q494V2 611 aa16.41■□□□□ 0.22
SDC2-201ENST00000302190 TTC41PQ6P2S7 1318 aa16.41■□□□□ 0.22
SDC2-201ENST00000302190 DCCP43146 1447 aa16.41■□□□□ 0.22
SDC2-201ENST00000302190 UTRNP46939 3433 aa16.41■□□□□ 0.22
SDC2-201ENST00000302190 ERICH4A6NGS2 130 aa16.41■□□□□ 0.22
SDC2-201ENST00000302190 UVSSAQ2YD98 709 aa16.41■□□□□ 0.22
SDC2-201ENST00000302190 LSG1Q9H089 658 aaKnown RBP16.41■□□□□ 0.22
SDC2-201ENST00000302190 DDX19AQ9NUU7 478 aaKnown RBP16.41■□□□□ 0.22
SDC2-201ENST00000302190 ARHGEF10O15013 1369 aa16.41■□□□□ 0.22
SDC2-201ENST00000302190 HS1BP3Q53T59 392 aa16.41■□□□□ 0.22
SDC2-201ENST00000302190 METTL24Q5JXM2 366 aa16.41■□□□□ 0.22
SDC2-201ENST00000302190 USP16Q9Y5T5 823 aa16.41■□□□□ 0.22
SDC2-201ENST00000302190 ALDH1L1O75891 902 aa16.4■□□□□ 0.22
SDC2-201ENST00000302190 CGNQ9P2M7 1197 aaKnown RBP16.4■□□□□ 0.22
SDC2-201ENST00000302190 ORC3Q9UBD5 711 aaPredicted RBP16.4■□□□□ 0.22
SDC2-201ENST00000302190 A0A1B0GVL5 298 aa16.4■□□□□ 0.22
SDC2-201ENST00000302190 VPS37DQ86XT2 251 aa16.4■□□□□ 0.22
SDC2-201ENST00000302190 ZNF496Q96IT1 587 aaPredicted RBP16.4■□□□□ 0.22
SDC2-201ENST00000302190 FTOQ9C0B1 505 aaKnown RBP eCLIP16.4■□□□□ 0.227e-7■■□□□ 13
SDC2-201ENST00000302190 CHGBP05060 677 aa16.39■□□□□ 0.22
SDC2-201ENST00000302190 SAFBQ15424 915 aaKnown RBP eCLIP16.39■□□□□ 0.22
SDC2-201ENST00000302190 IMMTQ16891 758 aaKnown RBP16.39■□□□□ 0.22
SDC2-201ENST00000302190 AOPEPQ8N6M6 819 aa16.39■□□□□ 0.22
SDC2-201ENST00000302190 TRPM3Q9HCF6 1732 aaPredicted RBP16.39■□□□□ 0.21
SDC2-201ENST00000302190 CUL4AQ13619 759 aa16.39■□□□□ 0.21
SDC2-201ENST00000302190 SKIDA1Q1XH10 827 aa16.39■□□□□ 0.21
SDC2-201ENST00000302190 DDIT3P35638 169 aa16.39■□□□□ 0.21
SDC2-201ENST00000302190 KLHL10Q6JEL2 608 aa16.39■□□□□ 0.21
SDC2-201ENST00000302190 OLFM4Q6UX06 510 aa16.39■□□□□ 0.21
SDC2-201ENST00000302190 TMC6Q7Z403 805 aa16.39■□□□□ 0.21
SDC2-201ENST00000302190 ZNF589Q86UQ0 364 aaPredicted RBP16.39■□□□□ 0.21
SDC2-201ENST00000302190 DHX16O60231 1041 aaKnown RBP16.38■□□□□ 0.21
SDC2-201ENST00000302190 KIF20AO95235 890 aa16.38■□□□□ 0.21
SDC2-201ENST00000302190 MCMDC2Q4G0Z9 681 aa16.38■□□□□ 0.21
SDC2-201ENST00000302190 DDX21Q9NR30 783 aaKnown RBP eCLIP16.38■□□□□ 0.21
SDC2-201ENST00000302190 NRBP1Q9UHY1 535 aa16.38■□□□□ 0.21
SDC2-201ENST00000302190 IQSEC3Q9UPP2 1182 aaPredicted RBP16.38■□□□□ 0.21
SDC2-201ENST00000302190 KLF18A0A0U1RQI7 1052 aa16.38■□□□□ 0.21
SDC2-201ENST00000302190 SNRPA1P09661 255 aaKnown RBP16.38■□□□□ 0.21
SDC2-201ENST00000302190 SKILP12757 684 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms