RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 KLHDC4Q8TBB5 520 aa12.78□□□□□ -0.36
SNX20-201ENST00000300590 TTC41PQ6P2S7 1318 aa12.77□□□□□ -0.36
SNX20-201ENST00000300590 KIF20BQ96Q89 1820 aa12.77□□□□□ -0.36
SNX20-201ENST00000300590 ATP1A3P13637 1013 aa12.77□□□□□ -0.36
SNX20-201ENST00000300590 EYA1Q99502 592 aa12.77□□□□□ -0.36
SNX20-201ENST00000300590 CHPF2Q9P2E5 772 aa12.77□□□□□ -0.36
SNX20-201ENST00000300590 MCM6Q14566 821 aa12.77□□□□□ -0.37
SNX20-201ENST00000300590 UHRF1BP1LA0JNW5 1464 aa12.77□□□□□ -0.37
SNX20-201ENST00000300590 POLR3DP05423 398 aaPredicted RBP12.77□□□□□ -0.37
SNX20-201ENST00000300590 FAM160A1Q05DH4 1040 aa12.77□□□□□ -0.37
SNX20-201ENST00000300590 CHST3Q7LGC8 479 aa12.77□□□□□ -0.37
SNX20-201ENST00000300590 PDILTQ8N807 584 aa12.77□□□□□ -0.37
SNX20-201ENST00000300590 RGS22Q8NE09 1264 aa12.77□□□□□ -0.37
SNX20-201ENST00000300590 DNAAF4Q8WXU2 420 aa12.77□□□□□ -0.37
SNX20-201ENST00000300590 KIDINS220Q9ULH0 1771 aa12.76□□□□□ -0.37
SNX20-201ENST00000300590 LMTK2Q8IWU2 1503 aa12.76□□□□□ -0.37
SNX20-201ENST00000300590 TBC1D8O95759 1140 aa12.76□□□□□ -0.37
SNX20-201ENST00000300590 SERPINC1P01008 464 aa12.76□□□□□ -0.37
SNX20-201ENST00000300590 GNG11P61952 73 aa12.76□□□□□ -0.37
SNX20-201ENST00000300590 MLECQ14165 292 aa12.76□□□□□ -0.37
SNX20-201ENST00000300590 CREBRFQ8IUR6 639 aa12.76□□□□□ -0.37
SNX20-201ENST00000300590 IL17REQ8NFR9 667 aa12.76□□□□□ -0.37
SNX20-201ENST00000300590 EAF2Q96CJ1 260 aaPredicted RBP12.76□□□□□ -0.37
SNX20-201ENST00000300590 NEK1Q96PY6 1258 aa12.76□□□□□ -0.37
SNX20-201ENST00000300590 ADCY9O60503 1353 aa12.76□□□□□ -0.37
SNX20-201ENST00000300590 GNAT3A8MTJ3 354 aa12.76□□□□□ -0.37
SNX20-201ENST00000300590 TEFQ10587 303 aa12.76□□□□□ -0.37
SNX20-201ENST00000300590 SCRN1Q12765 414 aa12.76□□□□□ -0.37
SNX20-201ENST00000300590 CFAP100Q494V2 611 aa12.76□□□□□ -0.37
SNX20-201ENST00000300590 USHBP1Q8N6Y0 703 aa12.76□□□□□ -0.37
SNX20-201ENST00000300590 CCDC150Q8NCX0 1101 aa12.76□□□□□ -0.37
SNX20-201ENST00000300590 ZSCAN16Q9H4T2 348 aaPredicted RBP12.76□□□□□ -0.37
SNX20-201ENST00000300590 FANCGO15287 622 aa12.75□□□□□ -0.37
SNX20-201ENST00000300590 CWF19L2Q2TBE0 894 aaKnown RBP12.75□□□□□ -0.37
SNX20-201ENST00000300590 TEX2Q8IWB9 1127 aa12.75□□□□□ -0.37
SNX20-201ENST00000300590 OSBPL5Q9H0X9 879 aaPredicted RBP12.75□□□□□ -0.37
SNX20-201ENST00000300590 ARFGAP3Q9NP61 516 aa12.75□□□□□ -0.37
SNX20-201ENST00000300590 ADAM21Q9UKJ8 722 aa12.75□□□□□ -0.37
SNX20-201ENST00000300590 TADA3O75528 432 aa12.75□□□□□ -0.37
SNX20-201ENST00000300590 NDUFA8P51970 172 aa12.75□□□□□ -0.37
SNX20-201ENST00000300590 APOBRQ0VD83 1088 aa12.75□□□□□ -0.37
SNX20-201ENST00000300590 PSDA5PKW4 1024 aaPredicted RBP12.75□□□□□ -0.37
SNX20-201ENST00000300590 PHACTR2O75167 634 aa12.75□□□□□ -0.37
SNX20-201ENST00000300590 G3BP1Q13283 466 aaKnown RBP eCLIP12.75□□□□□ -0.37
SNX20-201ENST00000300590 CC2D1AQ6P1N0 951 aaPredicted RBP12.75□□□□□ -0.37
SNX20-201ENST00000300590 AK7Q96M32 723 aa12.75□□□□□ -0.37
SNX20-201ENST00000300590 RCOR1Q9UKL0 485 aa12.75□□□□□ -0.37
SNX20-201ENST00000300590 PCDHA7Q9UN72 937 aa12.75□□□□□ -0.37
SNX20-201ENST00000300590 MAP3K5Q99683 1374 aa12.74□□□□□ -0.37
SNX20-201ENST00000300590 ADD1P35611 737 aaKnown RBP12.74□□□□□ -0.37
SNX20-201ENST00000300590 FAM193AP78312 1265 aa12.74□□□□□ -0.37
SNX20-201ENST00000300590 RAB11FIP4Q86YS3 637 aa12.74□□□□□ -0.37
SNX20-201ENST00000300590 VPS18Q9P253 973 aa12.74□□□□□ -0.37
SNX20-201ENST00000300590 CHD1O14646 1710 aa12.74□□□□□ -0.37
SNX20-201ENST00000300590 NPM1P06748 294 aaKnown RBP eCLIP12.74□□□□□ -0.37
SNX20-201ENST00000300590 GTF2A1P52655 376 aaPredicted RBP12.74□□□□□ -0.37
SNX20-201ENST00000300590 FANCCQ00597 558 aa12.74□□□□□ -0.37
SNX20-201ENST00000300590 STK38Q15208 465 aa12.74□□□□□ -0.37
SNX20-201ENST00000300590 DPF2Q92785 391 aa12.74□□□□□ -0.37
SNX20-201ENST00000300590 KCNB2Q92953 911 aa12.74□□□□□ -0.37
SNX20-201ENST00000300590 PARD6BQ9BYG5 372 aa12.74□□□□□ -0.37
SNX20-201ENST00000300590 CWC15Q9P013 229 aaKnown RBP12.74□□□□□ -0.37
SNX20-201ENST00000300590 IMPACTQ9P2X3 320 aa12.74□□□□□ -0.37
SNX20-201ENST00000300590 RRP15Q9Y3B9 282 aaKnown RBP12.74□□□□□ -0.37
SNX20-201ENST00000300590 ACEP12821 1306 aa12.74□□□□□ -0.37
SNX20-201ENST00000300590 PTPDC1A2A3K4 754 aa12.73□□□□□ -0.37
SNX20-201ENST00000300590 KCNQ3O43525 872 aa12.73□□□□□ -0.37
SNX20-201ENST00000300590 DHX16O60231 1041 aaKnown RBP12.73□□□□□ -0.37
SNX20-201ENST00000300590 DHX37Q8IY37 1157 aaKnown RBP12.73□□□□□ -0.37
SNX20-201ENST00000300590 PLEKHA4Q9H4M7 779 aa12.73□□□□□ -0.37
SNX20-201ENST00000300590 SLC3A2P08195 630 aaKnown RBP12.73□□□□□ -0.37
SNX20-201ENST00000300590 UBASH3AP57075 661 aa12.73□□□□□ -0.37
SNX20-201ENST00000300590 AIMP1Q12904 312 aaKnown RBP12.73□□□□□ -0.37
SNX20-201ENST00000300590 KARSQ15046 597 aaKnown RBP12.73□□□□□ -0.37
SNX20-201ENST00000300590 BEND3Q5T5X7 828 aa12.73□□□□□ -0.37
SNX20-201ENST00000300590 ENGASEQ8NFI3 743 aa12.73□□□□□ -0.37
SNX20-201ENST00000300590 MRPS27Q92552 414 aaKnown RBP12.73□□□□□ -0.37
SNX20-201ENST00000300590 WDR24Q96S15 920 aa12.73□□□□□ -0.37
SNX20-201ENST00000300590 KIAA1468Q9P260 1216 aa12.73□□□□□ -0.37
SNX20-201ENST00000300590 PRR36Q9H6K5 1346 aa12.73□□□□□ -0.37
SNX20-201ENST00000300590 CASQ1P31415 396 aa12.73□□□□□ -0.37
SNX20-201ENST00000300590 LRRFIP1Q32MZ4 808 aaKnown RBP12.73□□□□□ -0.37
SNX20-201ENST00000300590 FOXR1Q6PIV2 292 aa12.73□□□□□ -0.37
SNX20-201ENST00000300590 TRIM65Q6PJ69 517 aa12.73□□□□□ -0.37
SNX20-201ENST00000300590 REXO1L1PQ8IX06 675 aa12.73□□□□□ -0.37
SNX20-201ENST00000300590 GPATCH11Q8N954 259 aa12.73□□□□□ -0.37
SNX20-201ENST00000300590 ZNF396Q96N95 335 aaPredicted RBP12.73□□□□□ -0.37
SNX20-201ENST00000300590 EFCAB8A8MWE9 144 aa12.72□□□□□ -0.37
SNX20-201ENST00000300590 WWC2Q6AWC2 1192 aa12.72□□□□□ -0.37
SNX20-201ENST00000300590 PARP3Q9Y6F1 533 aa12.72□□□□□ -0.37
SNX20-201ENST00000300590 H3BQF6 201 aa12.72□□□□□ -0.37
SNX20-201ENST00000300590 PPP2R3AQ06190 1150 aa12.72□□□□□ -0.37
SNX20-201ENST00000300590 LEKR1Q6ZMV7 388 aa12.72□□□□□ -0.37
SNX20-201ENST00000300590 GJB4Q9NTQ9 266 aa12.72□□□□□ -0.37
SNX20-201ENST00000300590 PUF60Q9UHX1 559 aaKnown RBP12.72□□□□□ -0.37
SNX20-201ENST00000300590 TMEM232C9JQI7 657 aa12.72□□□□□ -0.37
SNX20-201ENST00000300590 TAF5LO75529 589 aa12.72□□□□□ -0.37
SNX20-201ENST00000300590 SASH1O94885 1247 aa12.72□□□□□ -0.37
SNX20-201ENST00000300590 HIP1O00291 1037 aa12.71□□□□□ -0.37
SNX20-201ENST00000300590 CCDC158Q5M9N0 1113 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms