RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 IL17REQ8NFR9 667 aa15.76■□□□□ 0.11
RPUSD4-201ENST00000298317 NAT10Q9H0A0 1025 aaKnown RBP15.76■□□□□ 0.11
RPUSD4-201ENST00000298317 TAF7Q15545 349 aaPredicted RBP15.76■□□□□ 0.11
RPUSD4-201ENST00000298317 DNAAF4Q8WXU2 420 aa15.76■□□□□ 0.11
RPUSD4-201ENST00000298317 DHX8Q14562 1220 aaKnown RBP15.75■□□□□ 0.11
RPUSD4-201ENST00000298317 NEK11Q8NG66 645 aa15.75■□□□□ 0.11
RPUSD4-201ENST00000298317 TRERF1Q96PN7 1200 aa15.75■□□□□ 0.11
RPUSD4-201ENST00000298317 SFPQP23246 707 aaKnown RBP eCLIP15.75■□□□□ 0.11
RPUSD4-201ENST00000298317 ETF1P62495 437 aaKnown RBP15.75■□□□□ 0.11
RPUSD4-201ENST00000298317 SMARCC2Q8TAQ2 1214 aa15.75■□□□□ 0.11
RPUSD4-201ENST00000298317 UBXN4Q92575 508 aa15.75■□□□□ 0.11
RPUSD4-201ENST00000298317 PLEKHG3A1L390 1219 aa15.74■□□□□ 0.11
RPUSD4-201ENST00000298317 CEBPZQ03701 1054 aaKnown RBP15.74■□□□□ 0.11
RPUSD4-201ENST00000298317 AACSQ86V21 672 aa15.74■□□□□ 0.11
RPUSD4-201ENST00000298317 NFATC2IPQ8NCF5 419 aa15.74■□□□□ 0.11
RPUSD4-201ENST00000298317 BPIFA3Q9BQP9 254 aa15.74■□□□□ 0.11
RPUSD4-201ENST00000298317 SRRTQ9BXP5 876 aaKnown RBP15.74■□□□□ 0.11
RPUSD4-201ENST00000298317 GEMIN8Q9NWZ8 242 aaKnown RBP15.74■□□□□ 0.11
RPUSD4-201ENST00000298317 SOX12O15370 315 aa15.74■□□□□ 0.11
RPUSD4-201ENST00000298317 TADA3O75528 432 aa15.74■□□□□ 0.11
RPUSD4-201ENST00000298317 NPM1P06748 294 aaKnown RBP eCLIP15.74■□□□□ 0.11
RPUSD4-201ENST00000298317 PSEN1P49768 467 aa15.74■□□□□ 0.11
RPUSD4-201ENST00000298317 NAA16Q6N069 864 aaPredicted RBP15.74■□□□□ 0.11
RPUSD4-201ENST00000298317 SYTL4Q96C24 671 aaPredicted RBP15.74■□□□□ 0.11
RPUSD4-201ENST00000298317 FTOQ9C0B1 505 aaKnown RBP eCLIP15.74■□□□□ 0.11
RPUSD4-201ENST00000298317 XPO4Q9C0E2 1151 aaKnown RBP15.74■□□□□ 0.11
RPUSD4-201ENST00000298317 ABCC6O95255 1503 aa15.74■□□□□ 0.11
RPUSD4-201ENST00000298317 PI4KAP2A4QPH2 592 aa15.73■□□□□ 0.11
RPUSD4-201ENST00000298317 USPL1Q5W0Q7 1092 aa15.73■□□□□ 0.11
RPUSD4-201ENST00000298317 TMC6Q7Z403 805 aa15.73■□□□□ 0.11
RPUSD4-201ENST00000298317 PI4KAP1Q8N8J0 262 aa15.73■□□□□ 0.11
RPUSD4-201ENST00000298317 KRT32Q14532 448 aa15.73■□□□□ 0.11
RPUSD4-201ENST00000298317 ATL3Q6DD88 541 aa15.73■□□□□ 0.11
RPUSD4-201ENST00000298317 ZNF589Q86UQ0 364 aaPredicted RBP15.73■□□□□ 0.11
RPUSD4-201ENST00000298317 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.72■□□□□ 0.11
RPUSD4-201ENST00000298317 EFCAB8A8MWE9 144 aa15.72■□□□□ 0.11
RPUSD4-201ENST00000298317 POLR3GO15318 223 aaPredicted RBP15.72■□□□□ 0.11
RPUSD4-201ENST00000298317 CCP110O43303 1012 aa15.72■□□□□ 0.11
RPUSD4-201ENST00000298317 NRDCO43847 1150 aa15.72■□□□□ 0.11
RPUSD4-201ENST00000298317 CCDC158Q5M9N0 1113 aa15.72■□□□□ 0.11
RPUSD4-201ENST00000298317 SMARCE1Q969G3 411 aa15.72■□□□□ 0.11
RPUSD4-201ENST00000298317 USP28Q96RU2 1077 aa15.72■□□□□ 0.11
RPUSD4-201ENST00000298317 LLPHQ9BRT6 129 aaKnown RBP15.72■□□□□ 0.11
RPUSD4-201ENST00000298317 PA2G4Q9UQ80 394 aaKnown RBP15.72■□□□□ 0.11
RPUSD4-201ENST00000298317 HDAC5Q9UQL6 1122 aa15.72■□□□□ 0.11
RPUSD4-201ENST00000298317 NWD1Q149M9 1564 aa15.72■□□□□ 0.11
RPUSD4-201ENST00000298317 ST5P78524 1137 aa15.72■□□□□ 0.11
RPUSD4-201ENST00000298317 TRIM65Q6PJ69 517 aa15.72■□□□□ 0.11
RPUSD4-201ENST00000298317 FSIP1Q8NA03 581 aa15.72■□□□□ 0.11
RPUSD4-201ENST00000298317 IFNKQ9P0W0 207 aa15.72■□□□□ 0.11
RPUSD4-201ENST00000298317 DNAI1Q9UI46 699 aa15.72■□□□□ 0.11
RPUSD4-201ENST00000298317 NUTM2FA1L443 756 aa15.71■□□□□ 0.11
RPUSD4-201ENST00000298317 FANCGO15287 622 aa15.71■□□□□ 0.11
RPUSD4-201ENST00000298317 TAF5LO75529 589 aa15.71■□□□□ 0.11
RPUSD4-201ENST00000298317 SMC2O95347 1197 aa15.71■□□□□ 0.11
RPUSD4-201ENST00000298317 TBC1D8O95759 1140 aa15.71■□□□□ 0.11
RPUSD4-201ENST00000298317 TPM1P09493 284 aa15.71■□□□□ 0.11
RPUSD4-201ENST00000298317 SCRN1Q12765 414 aa15.71■□□□□ 0.11
RPUSD4-201ENST00000298317 NUTM2GQ5VZR2 741 aa15.71■□□□□ 0.11
RPUSD4-201ENST00000298317 FMR1NBQ8N0W7 255 aaPredicted RBP15.71■□□□□ 0.11
RPUSD4-201ENST00000298317 ZBTB9Q96C00 473 aa15.71■□□□□ 0.11
RPUSD4-201ENST00000298317 FSD1Q9BTV5 496 aa15.71■□□□□ 0.11
RPUSD4-201ENST00000298317 EFCC1Q9HA90 598 aa15.71■□□□□ 0.11
RPUSD4-201ENST00000298317 SASH3O75995 380 aa15.71■□□□□ 0.11
RPUSD4-201ENST00000298317 SEC31AO94979 1220 aaKnown RBP15.71■□□□□ 0.11
RPUSD4-201ENST00000298317 GORABQ5T7V8 394 aa15.71■□□□□ 0.11
RPUSD4-201ENST00000298317 KRBA2Q6ZNG9 492 aa15.71■□□□□ 0.11
RPUSD4-201ENST00000298317 HOMER1Q86YM7 354 aa15.71■□□□□ 0.11
RPUSD4-201ENST00000298317 MNS1Q8NEH6 495 aa15.71■□□□□ 0.11
RPUSD4-201ENST00000298317 ERCC4Q92889 916 aaPredicted RBP15.71■□□□□ 0.11
RPUSD4-201ENST00000298317 EAF2Q96CJ1 260 aaPredicted RBP15.71■□□□□ 0.11
RPUSD4-201ENST00000298317 NEK1Q96PY6 1258 aa15.71■□□□□ 0.11
RPUSD4-201ENST00000298317 CHPF2Q9P2E5 772 aa15.71■□□□□ 0.11
RPUSD4-201ENST00000298317 ALDH1L1O75891 902 aa15.7■□□□□ 0.1
RPUSD4-201ENST00000298317 HOXB7P09629 217 aa15.7■□□□□ 0.1
RPUSD4-201ENST00000298317 OAS2P29728 719 aaKnown RBP15.7■□□□□ 0.1
RPUSD4-201ENST00000298317 DPCR1Q3MIW9 517 aa15.7■□□□□ 0.1
RPUSD4-201ENST00000298317 Q6ZUG5 572 aa15.7■□□□□ 0.1
RPUSD4-201ENST00000298317 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.7■□□□□ 0.1
RPUSD4-201ENST00000298317 PTPRUQ92729 1446 aa15.7■□□□□ 0.1
RPUSD4-201ENST00000298317 NEDD4P46934 1319 aa15.7■□□□□ 0.1
RPUSD4-201ENST00000298317 LRRFIP1Q32MZ4 808 aaKnown RBP15.7■□□□□ 0.1
RPUSD4-201ENST00000298317 NSUN7Q8NE18 718 aaKnown RBP15.7■□□□□ 0.1
RPUSD4-201ENST00000298317 ZNF396Q96N95 335 aaPredicted RBP15.7■□□□□ 0.1
RPUSD4-201ENST00000298317 PARP3Q9Y6F1 533 aa15.7■□□□□ 0.1
RPUSD4-201ENST00000298317 MED1Q15648 1581 aaPredicted RBP15.7■□□□□ 0.1
RPUSD4-201ENST00000298317 COL15A1P39059 1388 aa15.7■□□□□ 0.1
RPUSD4-201ENST00000298317 CLGNO14967 610 aa15.69■□□□□ 0.1
RPUSD4-201ENST00000298317 SASH1O94885 1247 aa15.69■□□□□ 0.1
RPUSD4-201ENST00000298317 GPS2Q13227 327 aa15.69■□□□□ 0.1
RPUSD4-201ENST00000298317 CC2D1AQ6P1N0 951 aaPredicted RBP15.69■□□□□ 0.1
RPUSD4-201ENST00000298317 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.69■□□□□ 0.1
RPUSD4-201ENST00000298317 PFKFB2O60825 505 aa15.69■□□□□ 0.1
RPUSD4-201ENST00000298317 HSP90B1P14625 803 aaKnown RBP15.69■□□□□ 0.1
RPUSD4-201ENST00000298317 EIF2S2P20042 333 aaKnown RBP15.69■□□□□ 0.1
RPUSD4-201ENST00000298317 PSME1Q06323 249 aa15.69■□□□□ 0.1
RPUSD4-201ENST00000298317 MRPS27Q92552 414 aaKnown RBP15.69■□□□□ 0.1
RPUSD4-201ENST00000298317 CHMP4CQ96CF2 233 aa15.69■□□□□ 0.1
RPUSD4-201ENST00000298317 KIAA1468Q9P260 1216 aa15.69■□□□□ 0.1
RPUSD4-201ENST00000298317 ROBO2Q9HCK4 1378 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms