RNA–Protein interactions for RNA: ENST00000287701.14

HMBOX1-201, Transcript of homeobox containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMBOX1, Length 3,184 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-201ENST00000287701 CCDC189A1A4V9 331 aa11.42□□□□□ -0.58
HMBOX1-201ENST00000287701 ZSCAN12O43309 604 aa11.42□□□□□ -0.58
HMBOX1-201ENST00000287701 LRRC31Q6UY01 552 aa11.42□□□□□ -0.58
HMBOX1-201ENST00000287701 BICD2Q8TD16 824 aa11.42□□□□□ -0.58
HMBOX1-201ENST00000287701 PHACTR3Q96KR7 559 aa11.42□□□□□ -0.58
HMBOX1-201ENST00000287701 GGNBP2Q9H3C7 697 aa11.42□□□□□ -0.58
HMBOX1-201ENST00000287701 TERF2IPQ9NYB0 399 aa11.42□□□□□ -0.58
HMBOX1-201ENST00000287701 CYP46A1Q9Y6A2 500 aa11.42□□□□□ -0.58
HMBOX1-201ENST00000287701 ELL2O00472 640 aaPredicted RBP11.42□□□□□ -0.58
HMBOX1-201ENST00000287701 KIF3CO14782 793 aa11.42□□□□□ -0.58
HMBOX1-201ENST00000287701 URI1O94763 535 aaPredicted RBP11.42□□□□□ -0.58
HMBOX1-201ENST00000287701 ME3Q16798 604 aa11.42□□□□□ -0.58
HMBOX1-201ENST00000287701 KRT24Q2M2I5 525 aa11.42□□□□□ -0.58
HMBOX1-201ENST00000287701 UNC5CLQ8IV45 518 aa11.42□□□□□ -0.58
HMBOX1-201ENST00000287701 TUBBP07437 444 aa11.42□□□□□ -0.58
HMBOX1-201ENST00000287701 TDO2P48775 406 aa11.42□□□□□ -0.58
HMBOX1-201ENST00000287701 ATP8B2P98198 1209 aa11.42□□□□□ -0.58
HMBOX1-201ENST00000287701 DNAJC21Q5F1R6 531 aaKnown RBP11.42□□□□□ -0.58
HMBOX1-201ENST00000287701 RBM28Q9NW13 759 aaKnown RBP11.42□□□□□ -0.58
HMBOX1-201ENST00000287701 CFAP45Q9UL16 551 aa11.42□□□□□ -0.58
HMBOX1-201ENST00000287701 PPP2R3AQ06190 1150 aa11.41□□□□□ -0.58
HMBOX1-201ENST00000287701 DNAAF4Q8WXU2 420 aa11.41□□□□□ -0.58
HMBOX1-201ENST00000287701 VPS18Q9P253 973 aa11.41□□□□□ -0.58
HMBOX1-201ENST00000287701 ANKRD1Q15327 319 aa11.41□□□□□ -0.58
HMBOX1-201ENST00000287701 BEND6Q5SZJ8 279 aaPredicted RBP11.41□□□□□ -0.58
HMBOX1-201ENST00000287701 ATL3Q6DD88 541 aa11.41□□□□□ -0.58
HMBOX1-201ENST00000287701 CNPY4Q8N129 248 aa11.41□□□□□ -0.58
HMBOX1-201ENST00000287701 MSANTD4Q8NCY6 345 aa11.41□□□□□ -0.58
HMBOX1-201ENST00000287701 THUMPD2Q9BTF0 503 aaKnown RBP11.41□□□□□ -0.58
HMBOX1-201ENST00000287701 CHMP3Q9Y3E7 222 aa11.41□□□□□ -0.58
HMBOX1-201ENST00000287701 SOS1Q07889 1333 aaPredicted RBP11.41□□□□□ -0.58
HMBOX1-201ENST00000287701 FANCGO15287 622 aa11.4□□□□□ -0.58
HMBOX1-201ENST00000287701 CALRP27797 417 aaKnown RBP11.4□□□□□ -0.58
HMBOX1-201ENST00000287701 TUBB2AQ13885 445 aa11.4□□□□□ -0.58
HMBOX1-201ENST00000287701 TUBB2BQ9BVA1 445 aa11.4□□□□□ -0.58
HMBOX1-201ENST00000287701 PPP1R12AO14974 1030 aaPredicted RBP11.4□□□□□ -0.58
HMBOX1-201ENST00000287701 ERLIN1O75477 346 aa11.4□□□□□ -0.58
HMBOX1-201ENST00000287701 GORABQ5T7V8 394 aa11.4□□□□□ -0.58
HMBOX1-201ENST00000287701 USP42Q9H9J4 1324 aaKnown RBP11.4□□□□□ -0.58
HMBOX1-201ENST00000287701 RAB11FIP3O75154 756 aa11.4□□□□□ -0.59
HMBOX1-201ENST00000287701 DDX11Q96FC9 970 aa11.4□□□□□ -0.59
HMBOX1-201ENST00000287701 STAG3Q9UJ98 1225 aa11.4□□□□□ -0.59
HMBOX1-201ENST00000287701 AKAP2Q9Y2D5 859 aa11.4□□□□□ -0.59
HMBOX1-201ENST00000287701 ATXN2Q99700 1313 aaKnown RBP11.4□□□□□ -0.59
HMBOX1-201ENST00000287701 RESTQ13127 1097 aa11.39□□□□□ -0.59
HMBOX1-201ENST00000287701 E2F4Q16254 413 aa11.39□□□□□ -0.59
HMBOX1-201ENST00000287701 EFCAB2Q5VUJ9 269 aa11.39□□□□□ -0.59
HMBOX1-201ENST00000287701 CCDC30Q5VVM6 783 aa11.39□□□□□ -0.59
HMBOX1-201ENST00000287701 TSHZ3Q63HK5 1081 aa11.39□□□□□ -0.59
HMBOX1-201ENST00000287701 FOXR1Q6PIV2 292 aa11.39□□□□□ -0.59
HMBOX1-201ENST00000287701 CNTROBQ8N137 903 aa11.39□□□□□ -0.59
HMBOX1-201ENST00000287701 PI4K2BQ8TCG2 481 aa11.39□□□□□ -0.59
HMBOX1-201ENST00000287701 ACBD3Q9H3P7 528 aa11.39□□□□□ -0.59
HMBOX1-201ENST00000287701 XRN1Q8IZH2 1706 aaKnown RBP11.39□□□□□ -0.59
HMBOX1-201ENST00000287701 PIK3C2BO00750 1634 aa11.39□□□□□ -0.59
HMBOX1-201ENST00000287701 MYO1BO43795 1136 aa11.39□□□□□ -0.59
HMBOX1-201ENST00000287701 DDR1Q08345 913 aa11.39□□□□□ -0.59
HMBOX1-201ENST00000287701 TBC1D22AQ8WUA7 517 aa11.39□□□□□ -0.59
HMBOX1-201ENST00000287701 RUFY2Q8WXA3 655 aa11.39□□□□□ -0.59
HMBOX1-201ENST00000287701 GBP3Q9H0R5 595 aa11.39□□□□□ -0.59
HMBOX1-201ENST00000287701 PDE11AQ9HCR9 933 aa11.39□□□□□ -0.59
HMBOX1-201ENST00000287701 L1RE1Q9UN81 338 aa11.39□□□□□ -0.59
HMBOX1-201ENST00000287701 PXDNLA1KZ92 1463 aa11.39□□□□□ -0.59
HMBOX1-201ENST00000287701 ATP7AQ04656 1500 aa11.39□□□□□ -0.59
HMBOX1-201ENST00000287701 CHL1O00533 1208 aa11.38□□□□□ -0.59
HMBOX1-201ENST00000287701 TMC6Q7Z403 805 aa11.38□□□□□ -0.59
HMBOX1-201ENST00000287701 AOPEPQ8N6M6 819 aa11.38□□□□□ -0.59
HMBOX1-201ENST00000287701 ENGASEQ8NFI3 743 aa11.38□□□□□ -0.59
HMBOX1-201ENST00000287701 RCOR1Q9UKL0 485 aa11.38□□□□□ -0.59
HMBOX1-201ENST00000287701 MAP2P11137 1827 aaKnown RBP11.38□□□□□ -0.59
HMBOX1-201ENST00000287701 VWA3AA6NCI4 1184 aa11.38□□□□□ -0.59
HMBOX1-201ENST00000287701 EP400NLQ6ZTU2 488 aa11.38□□□□□ -0.59
HMBOX1-201ENST00000287701 JAKMIP1Q96N16 626 aaKnown RBP11.38□□□□□ -0.59
HMBOX1-201ENST00000287701 XPO4Q9C0E2 1151 aaKnown RBP11.38□□□□□ -0.59
HMBOX1-201ENST00000287701 VIPAS39Q9H9C1 493 aa11.38□□□□□ -0.59
HMBOX1-201ENST00000287701 TPCN1Q9ULQ1 816 aa11.38□□□□□ -0.59
HMBOX1-201ENST00000287701 ERLIN2O94905 339 aa11.38□□□□□ -0.59
HMBOX1-201ENST00000287701 IL13P35225 146 aa11.38□□□□□ -0.59
HMBOX1-201ENST00000287701 POTEDQ86YR6 584 aa11.38□□□□□ -0.59
HMBOX1-201ENST00000287701 KIFC2Q96AC6 838 aa11.38□□□□□ -0.59
HMBOX1-201ENST00000287701 ABCC6O95255 1503 aa11.38□□□□□ -0.59
HMBOX1-201ENST00000287701 ARHGAP6O43182 974 aa11.37□□□□□ -0.59
HMBOX1-201ENST00000287701 PSMA5P28066 241 aa11.37□□□□□ -0.59
HMBOX1-201ENST00000287701 FAM160A1Q05DH4 1040 aa11.37□□□□□ -0.59
HMBOX1-201ENST00000287701 C11orf91Q3C1V1 193 aa11.37□□□□□ -0.59
HMBOX1-201ENST00000287701 HNRNPH1P31943 449 aaKnown RBP11.37□□□□□ -0.59
HMBOX1-201ENST00000287701 NECTIN1Q15223 517 aa11.37□□□□□ -0.59
HMBOX1-201ENST00000287701 FERMT3Q86UX7 667 aa11.37□□□□□ -0.59
HMBOX1-201ENST00000287701 CABP2Q9NPB3 220 aa11.37□□□□□ -0.59
HMBOX1-201ENST00000287701 TFIP11Q9UBB9 837 aaKnown RBP11.37□□□□□ -0.59
HMBOX1-201ENST00000287701 FAN1Q9Y2M0 1017 aa11.37□□□□□ -0.59
HMBOX1-201ENST00000287701 MAP3K5Q99683 1374 aa11.37□□□□□ -0.59
HMBOX1-201ENST00000287701 IKBKBO14920 756 aa11.36□□□□□ -0.59
HMBOX1-201ENST00000287701 SHOX2O60902 331 aaPredicted RBP11.36□□□□□ -0.59
HMBOX1-201ENST00000287701 AARSP49588 968 aaKnown RBP eCLIP11.36□□□□□ -0.59
HMBOX1-201ENST00000287701 FAM173BQ6P4H8 233 aa11.36□□□□□ -0.59
HMBOX1-201ENST00000287701 KINO60870 393 aaKnown RBP11.36□□□□□ -0.59
HMBOX1-201ENST00000287701 HSP90B2PQ58FF3 399 aa11.36□□□□□ -0.59
HMBOX1-201ENST00000287701 CCDC73Q6ZRK6 1079 aa11.36□□□□□ -0.59
HMBOX1-201ENST00000287701 SRGAP1Q7Z6B7 1085 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms