RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 TREML1Q86YW5 311 aa3.43□□□□□ -1.86
CHD1-201ENST00000284049 PLAAQ9Y263 795 aa3.43□□□□□ -1.86
CHD1-201ENST00000284049 A6NHS1 94 aa3.43□□□□□ -1.86
CHD1-201ENST00000284049 EDN3P14138 238 aa3.43□□□□□ -1.86
CHD1-201ENST00000284049 CES1P23141 567 aa3.43□□□□□ -1.86
CHD1-201ENST00000284049 GDF10P55107 478 aa3.43□□□□□ -1.86
CHD1-201ENST00000284049 DHX8Q14562 1220 aaKnown RBP3.43□□□□□ -1.86
CHD1-201ENST00000284049 CCSAPQ6IQ19 270 aaPredicted RBP3.43□□□□□ -1.86
CHD1-201ENST00000284049 NBPF10Q6P3W6 841 aaKnown RBP3.43□□□□□ -1.86
CHD1-201ENST00000284049 ZNF438Q7Z4V0 828 aa3.43□□□□□ -1.86
CHD1-201ENST00000284049 KLK14Q9P0G3 267 aa3.43□□□□□ -1.86
CHD1-201ENST00000284049 KIAA0586Q9BVV6 1533 aa3.43□□□□□ -1.86
CHD1-201ENST00000284049 ATMINO43313 823 aaPredicted RBP3.43□□□□□ -1.86
CHD1-201ENST00000284049 EVA1CP58658 441 aa3.43□□□□□ -1.86
CHD1-201ENST00000284049 SEZ6Q53EL9 994 aa3.43□□□□□ -1.86
CHD1-201ENST00000284049 CCDC85AQ96PX6 553 aaPredicted RBP3.43□□□□□ -1.86
CHD1-201ENST00000284049 A6NJY4 79 aa3.43□□□□□ -1.86
CHD1-201ENST00000284049 CCDC81Q6ZN84 652 aa3.43□□□□□ -1.86
CHD1-201ENST00000284049 SNX29Q8TEQ0 813 aa3.43□□□□□ -1.86
CHD1-201ENST00000284049 KHSRPQ92945 711 aaKnown RBP eCLIP3.43□□□□□ -1.868e-7■■■□□ 14.6
CHD1-201ENST00000284049 DNAJC7Q99615 494 aa3.43□□□□□ -1.86
CHD1-201ENST00000284049 UBP1Q9NZI7 540 aa3.43□□□□□ -1.86
CHD1-201ENST00000284049 SAMM50Q9Y512 469 aa3.43□□□□□ -1.86
CHD1-201ENST00000284049 FAM177BA6PVY3 158 aa3.43□□□□□ -1.86
CHD1-201ENST00000284049 PDGFRBP09619 1106 aa3.43□□□□□ -1.86
CHD1-201ENST00000284049 CD53P19397 219 aa3.43□□□□□ -1.86
CHD1-201ENST00000284049 RAPGEF1Q13905 1077 aa3.43□□□□□ -1.86
CHD1-201ENST00000284049 FXNQ16595 210 aa3.43□□□□□ -1.86
CHD1-201ENST00000284049 GK5Q6ZS86 529 aa3.43□□□□□ -1.86
CHD1-201ENST00000284049 CCT6BQ92526 530 aa3.43□□□□□ -1.86
CHD1-201ENST00000284049 C12orf49Q9H741 205 aa3.43□□□□□ -1.86
CHD1-201ENST00000284049 MAFGO15525 162 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 EPB42P16452 691 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 COPS2P61201 443 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 HNRNPUQ00839 825 aaKnown RBP eCLIP3.42□□□□□ -1.86
CHD1-201ENST00000284049 STRN3Q13033 797 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 TTF1Q15361 905 aaPredicted RBP3.42□□□□□ -1.86
CHD1-201ENST00000284049 DNAJC25Q9H1X3 360 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 ESYT3A0FGR9 886 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 ASMTLO95671 621 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 COL9A2Q14055 689 aaPredicted RBP3.42□□□□□ -1.86
CHD1-201ENST00000284049 CYP2U1Q7Z449 544 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 DDX42Q86XP3 938 aaKnown RBP eCLIP3.42□□□□□ -1.86
CHD1-201ENST00000284049 GOLM1Q8NBJ4 401 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 ZNF296Q8WUU4 475 aaPredicted RBP3.42□□□□□ -1.86
CHD1-201ENST00000284049 HNRNPLLQ8WVV9 542 aaKnown RBP3.42□□□□□ -1.86
CHD1-201ENST00000284049 RNPC3Q96LT9 517 aaKnown RBP3.42□□□□□ -1.86
CHD1-201ENST00000284049 ACTR10Q9NZ32 417 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 ANAPC4Q9UJX5 808 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 ARHGEF11O15085 1522 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 SLC9A5Q14940 896 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 TTC39BQ5VTQ0 682 aaPredicted RBP3.42□□□□□ -1.86
CHD1-201ENST00000284049 NIM1KQ8IY84 436 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 NOC4LQ9BVI4 516 aaKnown RBP3.42□□□□□ -1.86
CHD1-201ENST00000284049 GPN3Q9UHW5 284 aaPredicted RBP3.42□□□□□ -1.86
CHD1-201ENST00000284049 METRNQ9UJH8 293 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 HPS5Q9UPZ3 1129 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 ZNF165P49910 485 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 CNNM4Q6P4Q7 775 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 TRAF7Q6Q0C0 670 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 NCAPG2Q86XI2 1143 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 ALDH16A1Q8IZ83 802 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 EHBP1Q8NDI1 1231 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 CCDC74AQ96AQ1 378 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 UNC93B1Q9H1C4 597 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 PPCSQ9HAB8 311 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 RAB6BQ9NRW1 208 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 TRAK1Q9UPV9 953 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 MAPK8IP1Q9UQF2 711 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 A0A1W2PRU2 124 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 IRS4O14654 1257 aaPredicted RBP3.42□□□□□ -1.86
CHD1-201ENST00000284049 GSTT1P30711 240 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.42□□□□□ -1.86
CHD1-201ENST00000284049 CBX8Q9HC52 389 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 TYW1Q9NV66 732 aaKnown RBP3.42□□□□□ -1.86
CHD1-201ENST00000284049 IGF1RP08069 1367 aa3.42□□□□□ -1.86
CHD1-201ENST00000284049 ETFBP38117 255 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 ERCC6Q03468 1493 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 SEPT6Q14141 434 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 GNASQ5JWF2 1037 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 C10orf62Q5T681 223 aaPredicted RBP3.41□□□□□ -1.86
CHD1-201ENST00000284049 CHPFQ8IZ52 775 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 TNIP3Q96KP6 325 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 ZNF358Q9NW07 568 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 TATP17735 454 aaPredicted RBP3.41□□□□□ -1.86
CHD1-201ENST00000284049 DSC3Q14574 896 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 CWF19L2Q2TBE0 894 aaKnown RBP3.41□□□□□ -1.86
CHD1-201ENST00000284049 NKD1Q969G9 470 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 MKL1Q969V6 931 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 CTTNBP2Q8WZ74 1663 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 M0R2N6 131 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 EPHB1P54762 984 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 C11orf91Q3C1V1 193 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 TMEM214Q6NUQ4 689 aaKnown RBP3.41□□□□□ -1.86
CHD1-201ENST00000284049 SMAP1Q8IYB5 467 aaPredicted RBP3.41□□□□□ -1.86
CHD1-201ENST00000284049 BCO2Q9BYV7 579 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 PHACTR1Q9C0D0 580 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 CEP44Q9C0F1 390 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 GINM1Q9NU53 330 aa3.41□□□□□ -1.86
CHD1-201ENST00000284049 ZIM2Q9NZV7 527 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms