RNA–Protein interactions for RNA: ENST00000274963.12

FGD2-201, Transcript of FYVE, RhoGEF and PH domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD2, Length 3,046 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD2-201ENST00000274963 IL15P40933 162 aaPredicted RBP17.9■□□□□ 0.46
FGD2-201ENST00000274963 RAB11FIP4Q86YS3 637 aa17.9■□□□□ 0.46
FGD2-201ENST00000274963 VSIG10Q8N0Z9 540 aa17.9■□□□□ 0.46
FGD2-201ENST00000274963 NCOA5Q9HCD5 579 aaKnown RBP17.9■□□□□ 0.46
FGD2-201ENST00000274963 KIF1AQ12756 1690 aa17.9■□□□□ 0.46
FGD2-201ENST00000274963 H3BQV1 296 aa17.9■□□□□ 0.46
FGD2-201ENST00000274963 APOBRQ0VD83 1088 aa17.9■□□□□ 0.46
FGD2-201ENST00000274963 IFFO2Q5TF58 517 aa17.9■□□□□ 0.46
FGD2-201ENST00000274963 CCDC191Q8NCU4 936 aa17.9■□□□□ 0.46
FGD2-201ENST00000274963 PIGBQ92521 554 aa17.9■□□□□ 0.46
FGD2-201ENST00000274963 SIPA1L3O60292 1781 aaPredicted RBP17.9■□□□□ 0.46
FGD2-201ENST00000274963 GUCY1B3Q02153 619 aa17.9■□□□□ 0.46
FGD2-201ENST00000274963 CKAP2LQ8IYA6 745 aa17.9■□□□□ 0.46
FGD2-201ENST00000274963 HMG20BQ9P0W2 317 aa17.9■□□□□ 0.46
FGD2-201ENST00000274963 SCN11AQ9UI33 1791 aa17.9■□□□□ 0.46
FGD2-201ENST00000274963 KRT85P78386 507 aa17.89■□□□□ 0.45
FGD2-201ENST00000274963 U3KPZ7 1027 aaPredicted RBP17.89■□□□□ 0.45
FGD2-201ENST00000274963 PDLIM2Q96JY6 352 aa17.89■□□□□ 0.45
FGD2-201ENST00000274963 CARD10Q9BWT7 1032 aa17.89■□□□□ 0.45
FGD2-201ENST00000274963 STRCP1A6NGW2 1772 aa17.88■□□□□ 0.45
FGD2-201ENST00000274963 LIG1P18858 919 aa17.88■□□□□ 0.45
FGD2-201ENST00000274963 HLFQ16534 295 aa17.88■□□□□ 0.45
FGD2-201ENST00000274963 FAM184AQ8NB25 1140 aa17.88■□□□□ 0.45
FGD2-201ENST00000274963 CPDO75976 1380 aa17.88■□□□□ 0.45
FGD2-201ENST00000274963 TTC39AQ5SRH9 613 aa17.88■□□□□ 0.45
FGD2-201ENST00000274963 SCARF1Q14162 830 aa17.88■□□□□ 0.45
FGD2-201ENST00000274963 GPHNQ9NQX3 736 aaPredicted RBP17.88■□□□□ 0.45
FGD2-201ENST00000274963 KRT32Q14532 448 aa17.87■□□□□ 0.45
FGD2-201ENST00000274963 TMEM87AQ8NBN3 555 aa17.87■□□□□ 0.45
FGD2-201ENST00000274963 SPATA32Q96LK8 384 aa17.87■□□□□ 0.45
FGD2-201ENST00000274963 TBC1D2BQ9UPU7 963 aa17.87■□□□□ 0.45
FGD2-201ENST00000274963 HSPD1P10809 573 aaKnown RBP17.87■□□□□ 0.45
FGD2-201ENST00000274963 PDCP20941 246 aa17.87■□□□□ 0.45
FGD2-201ENST00000274963 SCRN1Q12765 414 aa17.87■□□□□ 0.45
FGD2-201ENST00000274963 TCIRG1Q13488 830 aa17.87■□□□□ 0.45
FGD2-201ENST00000274963 KIF6Q6ZMV9 814 aa17.87■□□□□ 0.45
FGD2-201ENST00000274963 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.87■□□□□ 0.45
FGD2-201ENST00000274963 KDM4AO75164 1064 aa17.86■□□□□ 0.45
FGD2-201ENST00000274963 XAGE2Q96GT9 111 aa17.86■□□□□ 0.45
FGD2-201ENST00000274963 M0R2C6 588 aa17.86■□□□□ 0.45
FGD2-201ENST00000274963 USPL1Q5W0Q7 1092 aa17.86■□□□□ 0.45
FGD2-201ENST00000274963 OSBP2Q969R2 916 aa17.86■□□□□ 0.45
FGD2-201ENST00000274963 IFIT5Q13325 482 aaKnown RBP17.85■□□□□ 0.45
FGD2-201ENST00000274963 CSPP1Q1MSJ5 1256 aa17.85■□□□□ 0.45
FGD2-201ENST00000274963 CCDC158Q5M9N0 1113 aa17.85■□□□□ 0.45
FGD2-201ENST00000274963 GTF3C6Q969F1 213 aa17.85■□□□□ 0.45
FGD2-201ENST00000274963 FTOQ9C0B1 505 aaKnown RBP eCLIP17.85■□□□□ 0.45
FGD2-201ENST00000274963 COL18A1P39060 1754 aa17.85■□□□□ 0.45
FGD2-201ENST00000274963 ADCY5O95622 1261 aa17.85■□□□□ 0.45
FGD2-201ENST00000274963 HELBQ8NG08 1087 aaPredicted RBP17.85■□□□□ 0.45
FGD2-201ENST00000274963 NOL7Q9UMY1 257 aaKnown RBP17.85■□□□□ 0.45
FGD2-201ENST00000274963 R3HCC1Q9Y3T6 440 aaKnown RBP17.85■□□□□ 0.45
FGD2-201ENST00000274963 BICD2Q8TD16 824 aa17.85■□□□□ 0.45
FGD2-201ENST00000274963 DACT1Q9NYF0 836 aa17.85■□□□□ 0.45
FGD2-201ENST00000274963 MAST3O60307 1309 aa17.85■□□□□ 0.45
FGD2-201ENST00000274963 ZAP70P43403 619 aa17.84■□□□□ 0.45
FGD2-201ENST00000274963 SOS2Q07890 1332 aaPredicted RBP17.84■□□□□ 0.45
FGD2-201ENST00000274963 LDHAL6AQ6ZMR3 332 aa17.84■□□□□ 0.45
FGD2-201ENST00000274963 DCCP43146 1447 aa17.84■□□□□ 0.45
FGD2-201ENST00000274963 RNF113AO15541 343 aaKnown RBP17.84■□□□□ 0.45
FGD2-201ENST00000274963 METTL24Q5JXM2 366 aa17.84■□□□□ 0.45
FGD2-201ENST00000274963 ATG3Q9NT62 314 aa17.84■□□□□ 0.45
FGD2-201ENST00000274963 COL5A2P05997 1499 aaPredicted RBP17.83■□□□□ 0.45
FGD2-201ENST00000274963 E7EWF7 191 aa17.83■□□□□ 0.45
FGD2-201ENST00000274963 SNAP23O00161 211 aa17.83■□□□□ 0.45
FGD2-201ENST00000274963 SPC24Q8NBT2 197 aa17.83■□□□□ 0.45
FGD2-201ENST00000274963 TTC12Q9H892 705 aaPredicted RBP17.83■□□□□ 0.45
FGD2-201ENST00000274963 CNNM1Q9NRU3 951 aa17.83■□□□□ 0.45
FGD2-201ENST00000274963 STARD3NLO95772 234 aa17.83■□□□□ 0.44
FGD2-201ENST00000274963 DHX32Q7L7V1 743 aaKnown RBP17.83■□□□□ 0.44
FGD2-201ENST00000274963 C17orf53Q8N3J3 647 aaPredicted RBP17.83■□□□□ 0.44
FGD2-201ENST00000274963 GREM2Q9H772 168 aa17.83■□□□□ 0.44
FGD2-201ENST00000274963 CCDC39Q9UFE4 941 aa17.83■□□□□ 0.44
FGD2-201ENST00000274963 TSGA10IPQ3SY00 556 aa17.82■□□□□ 0.44
FGD2-201ENST00000274963 ZMYM1Q5SVZ6 1142 aa17.82■□□□□ 0.44
FGD2-201ENST00000274963 ZKSCAN5Q9Y2L8 839 aa17.82■□□□□ 0.44
FGD2-201ENST00000274963 NKX1-1Q15270 411 aaPredicted RBP17.82■□□□□ 0.44
FGD2-201ENST00000274963 ISCA1Q9BUE6 129 aa17.82■□□□□ 0.44
FGD2-201ENST00000274963 TRMT112Q9UI30 125 aaKnown RBP17.82■□□□□ 0.44
FGD2-201ENST00000274963 AFDNP55196 1824 aaKnown RBP17.82■□□□□ 0.44
FGD2-201ENST00000274963 OTUD7BQ6GQQ9 843 aa17.82■□□□□ 0.44
FGD2-201ENST00000274963 ADAMTS7Q9UKP4 1686 aa17.82■□□□□ 0.44
FGD2-201ENST00000274963 CRYBG1Q9Y4K1 1723 aa17.81■□□□□ 0.44
FGD2-201ENST00000274963 ITGA6P23229 1130 aa17.81■□□□□ 0.44
FGD2-201ENST00000274963 LEO1Q8WVC0 666 aaPredicted RBP17.81■□□□□ 0.44
FGD2-201ENST00000274963 ZBTB1Q9Y2K1 713 aa17.81■□□□□ 0.44
FGD2-201ENST00000274963 APPP05067 770 aa17.81■□□□□ 0.44
FGD2-201ENST00000274963 FBXW7Q969H0 707 aa17.81■□□□□ 0.44
FGD2-201ENST00000274963 PUS7LQ9H0K6 701 aaKnown RBP17.81■□□□□ 0.44
FGD2-201ENST00000274963 NUP62CLQ9H1M0 184 aa17.81■□□□□ 0.44
FGD2-201ENST00000274963 HELLSQ9NRZ9 838 aa17.81■□□□□ 0.44
FGD2-201ENST00000274963 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.81■□□□□ 0.44
FGD2-201ENST00000274963 PTPDC1A2A3K4 754 aa17.8■□□□□ 0.44
FGD2-201ENST00000274963 NR1I2O75469 434 aa17.8■□□□□ 0.44
FGD2-201ENST00000274963 IDH1O75874 414 aaKnown RBP17.8■□□□□ 0.44
FGD2-201ENST00000274963 DNTTIP2Q5QJE6 756 aaKnown RBP17.8■□□□□ 0.44
FGD2-201ENST00000274963 TNMDQ9H2S6 317 aa17.8■□□□□ 0.44
FGD2-201ENST00000274963 SH3TC1Q8TE82 1336 aa17.8■□□□□ 0.44
FGD2-201ENST00000274963 LETM1O95202 739 aaPredicted RBP17.8■□□□□ 0.44
FGD2-201ENST00000274963 SLC4A9Q96Q91 983 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms