RNA–Protein interactions for RNA: ENST00000268099.13

SCAMP2-201, Transcript of secretory carrier membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP2, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-201ENST00000268099 CHPF2Q9P2E5 772 aa17.99■□□□□ 0.47
SCAMP2-201ENST00000268099 ORC3Q9UBD5 711 aaPredicted RBP17.99■□□□□ 0.47
SCAMP2-201ENST00000268099 SFPQP23246 707 aaKnown RBP eCLIP17.98■□□□□ 0.47
SCAMP2-201ENST00000268099 RAD51AP2Q09MP3 1159 aa17.98■□□□□ 0.47
SCAMP2-201ENST00000268099 MAPK8IP2Q13387 824 aaPredicted RBP17.98■□□□□ 0.47
SCAMP2-201ENST00000268099 FBXW7Q969H0 707 aa17.98■□□□□ 0.47
SCAMP2-201ENST00000268099 HSP90B1P14625 803 aaKnown RBP17.98■□□□□ 0.47
SCAMP2-201ENST00000268099 TPM4P67936 248 aa17.98■□□□□ 0.47
SCAMP2-201ENST00000268099 TMC6Q7Z403 805 aa17.98■□□□□ 0.47
SCAMP2-201ENST00000268099 ZNF589Q86UQ0 364 aaPredicted RBP17.98■□□□□ 0.47
SCAMP2-201ENST00000268099 UBXN4Q92575 508 aa17.98■□□□□ 0.47
SCAMP2-201ENST00000268099 FEZ2Q9UHY8 353 aaPredicted RBP17.98■□□□□ 0.47
SCAMP2-201ENST00000268099 KRT32Q14532 448 aa17.97■□□□□ 0.47
SCAMP2-201ENST00000268099 ERCC4Q92889 916 aaPredicted RBP17.97■□□□□ 0.47
SCAMP2-201ENST00000268099 XPO4Q9C0E2 1151 aaKnown RBP17.97■□□□□ 0.47
SCAMP2-201ENST00000268099 POLR3GO15318 223 aaPredicted RBP17.97■□□□□ 0.47
SCAMP2-201ENST00000268099 SMC2O95347 1197 aa17.97■□□□□ 0.47
SCAMP2-201ENST00000268099 GORABQ5T7V8 394 aa17.97■□□□□ 0.47
SCAMP2-201ENST00000268099 FSIP1Q8NA03 581 aa17.97■□□□□ 0.47
SCAMP2-201ENST00000268099 USP28Q96RU2 1077 aa17.97■□□□□ 0.47
SCAMP2-201ENST00000268099 TRIM34Q9BYJ4 488 aa17.97■□□□□ 0.47
SCAMP2-201ENST00000268099 ROBO2Q9HCK4 1378 aa17.97■□□□□ 0.47
SCAMP2-201ENST00000268099 PHLPP2Q6ZVD8 1323 aa17.96■□□□□ 0.47
SCAMP2-201ENST00000268099 NRDCO43847 1150 aa17.96■□□□□ 0.47
SCAMP2-201ENST00000268099 ETF1P62495 437 aaKnown RBP17.96■□□□□ 0.47
SCAMP2-201ENST00000268099 NAA16Q6N069 864 aaPredicted RBP17.96■□□□□ 0.47
SCAMP2-201ENST00000268099 Q6ZUG5 572 aa17.96■□□□□ 0.47
SCAMP2-201ENST00000268099 HOMER1Q86YM7 354 aa17.96■□□□□ 0.47
SCAMP2-201ENST00000268099 TXLNBQ8N3L3 684 aa17.96■□□□□ 0.47
SCAMP2-201ENST00000268099 NEK11Q8NG66 645 aa17.96■□□□□ 0.47
SCAMP2-201ENST00000268099 EAF2Q96CJ1 260 aaPredicted RBP17.96■□□□□ 0.47
SCAMP2-201ENST00000268099 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.96■□□□□ 0.47
SCAMP2-201ENST00000268099 NUTM2GQ5VZR2 741 aa17.96■□□□□ 0.47
SCAMP2-201ENST00000268099 SMARCC2Q8TAQ2 1214 aa17.96■□□□□ 0.47
SCAMP2-201ENST00000268099 NEK1Q96PY6 1258 aa17.96■□□□□ 0.47
SCAMP2-201ENST00000268099 CCDC8Q9H0W5 538 aaPredicted RBP17.96■□□□□ 0.47
SCAMP2-201ENST00000268099 IFNKQ9P0W0 207 aa17.96■□□□□ 0.47
SCAMP2-201ENST00000268099 TAF5LO75529 589 aa17.95■□□□□ 0.46
SCAMP2-201ENST00000268099 DHX8Q14562 1220 aaKnown RBP17.95■□□□□ 0.46
SCAMP2-201ENST00000268099 BOLA2Q9H3K6 86 aa17.95■□□□□ 0.46
SCAMP2-201ENST00000268099 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.95■□□□□ 0.46
SCAMP2-201ENST00000268099 DNAI1Q9UI46 699 aa17.95■□□□□ 0.46
SCAMP2-201ENST00000268099 ANXA1P04083 346 aa17.95■□□□□ 0.46
SCAMP2-201ENST00000268099 ME1P48163 572 aa17.95■□□□□ 0.46
SCAMP2-201ENST00000268099 FOSBP53539 338 aa17.95■□□□□ 0.46
SCAMP2-201ENST00000268099 SCRN1Q12765 414 aa17.95■□□□□ 0.46
SCAMP2-201ENST00000268099 USPL1Q5W0Q7 1092 aa17.95■□□□□ 0.46
SCAMP2-201ENST00000268099 C9orf78Q9NZ63 289 aaPredicted RBP17.95■□□□□ 0.46
SCAMP2-201ENST00000268099 SASH1O94885 1247 aa17.94■□□□□ 0.46
SCAMP2-201ENST00000268099 MUM1L1Q5H9M0 696 aa17.94■□□□□ 0.46
SCAMP2-201ENST00000268099 MNS1Q8NEH6 495 aa17.94■□□□□ 0.46
SCAMP2-201ENST00000268099 ZNF396Q96N95 335 aaPredicted RBP17.94■□□□□ 0.46
SCAMP2-201ENST00000268099 TLR7Q9NYK1 1049 aaKnown RBP17.94■□□□□ 0.46
SCAMP2-201ENST00000268099 ATL3Q6DD88 541 aa17.94■□□□□ 0.46
SCAMP2-201ENST00000268099 PLCD3Q8N3E9 789 aa17.94■□□□□ 0.46
SCAMP2-201ENST00000268099 BPIFA3Q9BQP9 254 aa17.94■□□□□ 0.46
SCAMP2-201ENST00000268099 LLPHQ9BRT6 129 aaKnown RBP17.94■□□□□ 0.46
SCAMP2-201ENST00000268099 UBXN6Q9BZV1 441 aa17.94■□□□□ 0.46
SCAMP2-201ENST00000268099 CCP110O43303 1012 aa17.93■□□□□ 0.46
SCAMP2-201ENST00000268099 ATP8B1O43520 1251 aa17.93■□□□□ 0.46
SCAMP2-201ENST00000268099 TADA3O75528 432 aa17.93■□□□□ 0.46
SCAMP2-201ENST00000268099 DPCR1Q3MIW9 517 aa17.93■□□□□ 0.46
SCAMP2-201ENST00000268099 FMR1NBQ8N0W7 255 aaPredicted RBP17.93■□□□□ 0.46
SCAMP2-201ENST00000268099 SRRTQ9BXP5 876 aaKnown RBP17.93■□□□□ 0.46
SCAMP2-201ENST00000268099 NWD1Q149M9 1564 aa17.93■□□□□ 0.46
SCAMP2-201ENST00000268099 ALDH1L1O75891 902 aa17.93■□□□□ 0.46
SCAMP2-201ENST00000268099 SEC31AO94979 1220 aaKnown RBP17.93■□□□□ 0.46
SCAMP2-201ENST00000268099 EIF4A1P60842 406 aaKnown RBP17.93■□□□□ 0.46
SCAMP2-201ENST00000268099 SDF4Q9BRK5 362 aa17.93■□□□□ 0.46
SCAMP2-201ENST00000268099 HOXB7P09629 217 aa17.92■□□□□ 0.46
SCAMP2-201ENST00000268099 ST5P78524 1137 aa17.92■□□□□ 0.46
SCAMP2-201ENST00000268099 NSUN7Q8NE18 718 aaKnown RBP17.92■□□□□ 0.46
SCAMP2-201ENST00000268099 SMARCE1Q969G3 411 aa17.92■□□□□ 0.46
SCAMP2-201ENST00000268099 EFCAB8A8MWE9 144 aa17.92■□□□□ 0.46
SCAMP2-201ENST00000268099 TPM1P09493 284 aa17.92■□□□□ 0.46
SCAMP2-201ENST00000268099 G3BP1Q13283 466 aaKnown RBP eCLIP17.92■□□□□ 0.46
SCAMP2-201ENST00000268099 ZRSR1Q15695 479 aaKnown RBP17.92■□□□□ 0.46
SCAMP2-201ENST00000268099 MRPS27Q92552 414 aaKnown RBP17.92■□□□□ 0.46
SCAMP2-201ENST00000268099 ABCC6O95255 1503 aa17.91■□□□□ 0.46
SCAMP2-201ENST00000268099 PFKFB2O60825 505 aa17.91■□□□□ 0.46
SCAMP2-201ENST00000268099 CCDC158Q5M9N0 1113 aa17.91■□□□□ 0.46
SCAMP2-201ENST00000268099 TRIM65Q6PJ69 517 aa17.91■□□□□ 0.46
SCAMP2-201ENST00000268099 KRBA2Q6ZNG9 492 aa17.91■□□□□ 0.46
SCAMP2-201ENST00000268099 COL15A1P39059 1388 aa17.91■□□□□ 0.46
SCAMP2-201ENST00000268099 URI1O94763 535 aaPredicted RBP17.91■□□□□ 0.46
SCAMP2-201ENST00000268099 OAS2P29728 719 aaKnown RBP17.91■□□□□ 0.46
SCAMP2-201ENST00000268099 LRRFIP1Q32MZ4 808 aaKnown RBP17.91■□□□□ 0.46
SCAMP2-201ENST00000268099 CARD6Q9BX69 1037 aa17.91■□□□□ 0.46
SCAMP2-201ENST00000268099 CHMP4AQ9BY43 222 aa17.91■□□□□ 0.46
SCAMP2-201ENST00000268099 KIAA1468Q9P260 1216 aa17.91■□□□□ 0.46
SCAMP2-201ENST00000268099 HDAC5Q9UQL6 1122 aa17.91■□□□□ 0.46
SCAMP2-201ENST00000268099 KDM3BQ7LBC6 1761 aa17.91■□□□□ 0.46
SCAMP2-201ENST00000268099 PTPRUQ92729 1446 aa17.9■□□□□ 0.46
SCAMP2-201ENST00000268099 PTPDC1A2A3K4 754 aa17.9■□□□□ 0.46
SCAMP2-201ENST00000268099 GPS2Q13227 327 aa17.9■□□□□ 0.46
SCAMP2-201ENST00000268099 LRRC2Q9BYS8 371 aa17.9■□□□□ 0.46
SCAMP2-201ENST00000268099 PCDHA7Q9UN72 937 aa17.9■□□□□ 0.46
SCAMP2-201ENST00000268099 FANCGO15287 622 aa17.9■□□□□ 0.46
SCAMP2-201ENST00000268099 CTDNEP1O95476 244 aa17.9■□□□□ 0.46
SCAMP2-201ENST00000268099 TBC1D8O95759 1140 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms