RNA–Protein interactions for RNA: ENST00000266743.6

SYCP3-201, Transcript of synaptonemal complex protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP3, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-201ENST00000266743 MPNDQ8N594 471 aa13.17□□□□□ -0.3
SYCP3-201ENST00000266743 KCNQ5Q9NR82 932 aa13.17□□□□□ -0.3
SYCP3-201ENST00000266743 COL3A1P02461 1466 aaPredicted RBP13.16□□□□□ -0.3
SYCP3-201ENST00000266743 ERVV-1B6SEH8 477 aa13.16□□□□□ -0.3
SYCP3-201ENST00000266743 PSMD14O00487 310 aa13.16□□□□□ -0.3
SYCP3-201ENST00000266743 ZNF34Q8IZ26 560 aa13.16□□□□□ -0.3
SYCP3-201ENST00000266743 SUPT20HQ8NEM7 779 aa13.16□□□□□ -0.3
SYCP3-201ENST00000266743 ZNF296Q8WUU4 475 aaPredicted RBP13.16□□□□□ -0.3
SYCP3-201ENST00000266743 TMX4Q9H1E5 349 aaPredicted RBP13.16□□□□□ -0.3
SYCP3-201ENST00000266743 HDAC9Q9UKV0 1011 aa13.16□□□□□ -0.3
SYCP3-201ENST00000266743 CDHR2Q9BYE9 1310 aa13.15□□□□□ -0.3
SYCP3-201ENST00000266743 KIF6Q6ZMV9 814 aa13.15□□□□□ -0.3
SYCP3-201ENST00000266743 MOB2Q70IA6 237 aa13.15□□□□□ -0.3
SYCP3-201ENST00000266743 RASAL3Q86YV0 1011 aa13.15□□□□□ -0.3
SYCP3-201ENST00000266743 NLRP3Q96P20 1036 aa13.15□□□□□ -0.3
SYCP3-201ENST00000266743 RSPH6AQ9H0K4 717 aa13.15□□□□□ -0.3
SYCP3-201ENST00000266743 VPS33BQ9H267 617 aa13.15□□□□□ -0.3
SYCP3-201ENST00000266743 DBNDD1Q9H9R9 158 aa13.15□□□□□ -0.3
SYCP3-201ENST00000266743 METRNQ9UJH8 293 aa13.15□□□□□ -0.3
SYCP3-201ENST00000266743 SCAF8Q9UPN6 1271 aaKnown RBP13.15□□□□□ -0.3
SYCP3-201ENST00000266743 HCLS1P14317 486 aaPredicted RBP13.14□□□□□ -0.31
SYCP3-201ENST00000266743 RTF1Q92541 710 aaKnown RBP13.14□□□□□ -0.31
SYCP3-201ENST00000266743 DCPSQ96C86 337 aaKnown RBP13.14□□□□□ -0.31
SYCP3-201ENST00000266743 RIMBP2O15034 1052 aa13.13□□□□□ -0.31
SYCP3-201ENST00000266743 SEC24BO95487 1268 aa13.13□□□□□ -0.31
SYCP3-201ENST00000266743 SP8Q8IXZ3 490 aa13.13□□□□□ -0.31
SYCP3-201ENST00000266743 GCC1Q96CN9 775 aa13.13□□□□□ -0.31
SYCP3-201ENST00000266743 CDCA5Q96FF9 252 aa13.13□□□□□ -0.31
SYCP3-201ENST00000266743 THUMPD2Q9BTF0 503 aaKnown RBP13.13□□□□□ -0.31
SYCP3-201ENST00000266743 GGA3Q9NZ52 723 aa13.13□□□□□ -0.31
SYCP3-201ENST00000266743 PER1O15534 1290 aaPredicted RBP13.12□□□□□ -0.31
SYCP3-201ENST00000266743 MKRN3Q13064 507 aaKnown RBP13.12□□□□□ -0.31
SYCP3-201ENST00000266743 DOK7Q18PE1 504 aa13.12□□□□□ -0.31
SYCP3-201ENST00000266743 R3HDMLQ9H3Y0 253 aa13.12□□□□□ -0.31
SYCP3-201ENST00000266743 IBTKQ9P2D0 1353 aaPredicted RBP13.11□□□□□ -0.31
SYCP3-201ENST00000266743 POTEFA5A3E0 1075 aa13.11□□□□□ -0.31
SYCP3-201ENST00000266743 FXR1P51114 621 aaKnown RBP eCLIP13.11□□□□□ -0.31
SYCP3-201ENST00000266743 TAF7Q15545 349 aaPredicted RBP13.11□□□□□ -0.31
SYCP3-201ENST00000266743 KIF4BQ2VIQ3 1234 aa13.11□□□□□ -0.31
SYCP3-201ENST00000266743 IER5LQ5T953 404 aa13.11□□□□□ -0.31
SYCP3-201ENST00000266743 PPP1R42Q7Z4L9 355 aa13.11□□□□□ -0.31
SYCP3-201ENST00000266743 DPF2Q92785 391 aa13.11□□□□□ -0.31
SYCP3-201ENST00000266743 UTP14AQ9BVJ6 771 aaKnown RBP13.11□□□□□ -0.31
SYCP3-201ENST00000266743 RTL9Q8NET4 1388 aa13.1□□□□□ -0.31
SYCP3-201ENST00000266743 MKI67P46013 3256 aaKnown RBP13.1□□□□□ -0.31
SYCP3-201ENST00000266743 UBE2Q2LH0YL09 131 aa13.1□□□□□ -0.31
SYCP3-201ENST00000266743 BBOX1O75936 387 aa13.1□□□□□ -0.31
SYCP3-201ENST00000266743 ANXA1P04083 346 aa13.1□□□□□ -0.31
SYCP3-201ENST00000266743 PKN2Q16513 984 aaKnown RBP13.1□□□□□ -0.31
SYCP3-201ENST00000266743 SLC10A5Q5PT55 438 aa13.1□□□□□ -0.31
SYCP3-201ENST00000266743 PRAMEF18Q5VWM3 479 aa13.1□□□□□ -0.31
SYCP3-201ENST00000266743 GIGYF2Q6Y7W6 1299 aaKnown RBP13.1□□□□□ -0.31
SYCP3-201ENST00000266743 SULF1Q8IWU6 871 aa13.1□□□□□ -0.31
SYCP3-201ENST00000266743 RNF25Q96BH1 459 aaPredicted RBP13.1□□□□□ -0.31
SYCP3-201ENST00000266743 GPR25O00155 361 aa13.09□□□□□ -0.31
SYCP3-201ENST00000266743 WASHC4Q2M389 1173 aa13.09□□□□□ -0.31
SYCP3-201ENST00000266743 LHX8Q68G74 356 aa13.09□□□□□ -0.31
SYCP3-201ENST00000266743 FBXO46Q6PJ61 603 aaPredicted RBP13.09□□□□□ -0.31
SYCP3-201ENST00000266743 DUOX1Q9NRD9 1551 aa13.08□□□□□ -0.32
SYCP3-201ENST00000266743 ECE2O60344 883 aa13.08□□□□□ -0.32
SYCP3-201ENST00000266743 U2AF1L5P0DN76 240 aaPredicted RBP13.08□□□□□ -0.32
SYCP3-201ENST00000266743 U2AF1Q01081 240 aaKnown RBP eCLIP13.08□□□□□ -0.32
SYCP3-201ENST00000266743 GRAPQ13588 217 aa13.08□□□□□ -0.32
SYCP3-201ENST00000266743 ANGEL2Q5VTE6 544 aaKnown RBP13.08□□□□□ -0.32
SYCP3-201ENST00000266743 DDX46Q7L014 1031 aaKnown RBP13.08□□□□□ -0.32
SYCP3-201ENST00000266743 GRAPLQ8TC17 118 aaPredicted RBP13.08□□□□□ -0.32
SYCP3-201ENST00000266743 POLLQ9UGP5 575 aa13.08□□□□□ -0.32
SYCP3-201ENST00000266743 NSFL1CQ9UNZ2 370 aaKnown RBP13.08□□□□□ -0.32
SYCP3-201ENST00000266743 C6orf229H3BNL8 230 aa13.07□□□□□ -0.32
SYCP3-201ENST00000266743 EIF4A1P60842 406 aaKnown RBP13.07□□□□□ -0.32
SYCP3-201ENST00000266743 SCARF1Q14162 830 aa13.07□□□□□ -0.32
SYCP3-201ENST00000266743 PROSER3Q2NL68 480 aa13.07□□□□□ -0.32
SYCP3-201ENST00000266743 PARP10Q53GL7 1025 aa13.07□□□□□ -0.32
SYCP3-201ENST00000266743 GPSM2P81274 684 aa13.06□□□□□ -0.32
SYCP3-201ENST00000266743 CELF1Q92879 486 aaKnown RBP13.06□□□□□ -0.32
SYCP3-201ENST00000266743 NUP98P52948 1817 aa13.05□□□□□ -0.32
SYCP3-201ENST00000266743 RPS12P25398 132 aaKnown RBP13.05□□□□□ -0.32
SYCP3-201ENST00000266743 LRP10Q7Z4F1 713 aa13.05□□□□□ -0.32
SYCP3-201ENST00000266743 NLRP10Q86W26 655 aa13.05□□□□□ -0.32
SYCP3-201ENST00000266743 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.05□□□□□ -0.32
SYCP3-201ENST00000266743 TIMELESSQ9UNS1 1208 aa13.05□□□□□ -0.32
SYCP3-201ENST00000266743 COLQQ9Y215 455 aaPredicted RBP13.05□□□□□ -0.32
SYCP3-201ENST00000266743 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.04□□□□□ -0.32
SYCP3-201ENST00000266743 FKTNO75072 461 aa13.04□□□□□ -0.32
SYCP3-201ENST00000266743 EN2P19622 333 aaPredicted RBP13.04□□□□□ -0.32
SYCP3-201ENST00000266743 EIF2S2P20042 333 aaKnown RBP13.04□□□□□ -0.32
SYCP3-201ENST00000266743 PDIA6Q15084 440 aa13.04□□□□□ -0.32
SYCP3-201ENST00000266743 NECTIN2Q92692 538 aa13.04□□□□□ -0.32
SYCP3-201ENST00000266743 ZFP91Q96JP5 570 aaPredicted RBP13.04□□□□□ -0.32
SYCP3-201ENST00000266743 TRMT112Q9UI30 125 aaKnown RBP13.04□□□□□ -0.32
SYCP3-201ENST00000266743 VIL1P09327 827 aaKnown RBP13.03□□□□□ -0.32
SYCP3-201ENST00000266743 PLCG2P16885 1265 aa13.03□□□□□ -0.32
SYCP3-201ENST00000266743 AIMP1Q12904 312 aaKnown RBP13.03□□□□□ -0.32
SYCP3-201ENST00000266743 TTLL12Q14166 644 aaPredicted RBP13.03□□□□□ -0.32
SYCP3-201ENST00000266743 TRIM17Q9Y577 477 aa13.03□□□□□ -0.32
SYCP3-201ENST00000266743 AKAP11Q9UKA4 1901 aa13.03□□□□□ -0.32
SYCP3-201ENST00000266743 POLR2AP24928 1970 aaKnown RBP13.03□□□□□ -0.32
SYCP3-201ENST00000266743 COL4A1P02462 1669 aa13.02□□□□□ -0.32
SYCP3-201ENST00000266743 HTATSF1O43719 755 aaKnown RBP13.02□□□□□ -0.33
SYCP3-201ENST00000266743 TM4SF4P48230 202 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms