RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 CSB-PGBD3P0DP91 1061 aa14.56□□□□□ -0.08
CHMP3-201ENST00000263856 SDF4Q9BRK5 362 aa14.56□□□□□ -0.08
CHMP3-201ENST00000263856 CFAP45Q9UL16 551 aa14.56□□□□□ -0.08
CHMP3-201ENST00000263856 SF3A1Q15459 793 aaKnown RBP14.56□□□□□ -0.08
CHMP3-201ENST00000263856 AMOTQ4VCS5 1084 aa14.56□□□□□ -0.08
CHMP3-201ENST00000263856 TNNI3KQ59H18 835 aa14.56□□□□□ -0.08
CHMP3-201ENST00000263856 FPGT-TNNI3KV9GXZ4 949 aa14.56□□□□□ -0.08
CHMP3-201ENST00000263856 NPHP4O75161 1426 aaPredicted RBP14.56□□□□□ -0.08
CHMP3-201ENST00000263856 A0A087WZG4 1122 aa14.55□□□□□ -0.08
CHMP3-201ENST00000263856 PTPDC1A2A3K4 754 aa14.55□□□□□ -0.08
CHMP3-201ENST00000263856 ZSCAN20P17040 1043 aaPredicted RBP14.55□□□□□ -0.08
CHMP3-201ENST00000263856 HAND2P61296 217 aa14.55□□□□□ -0.08
CHMP3-201ENST00000263856 RESTQ13127 1097 aa14.55□□□□□ -0.08
CHMP3-201ENST00000263856 GCKRQ14397 625 aa14.55□□□□□ -0.08
CHMP3-201ENST00000263856 HSP90AB3PQ58FF7 597 aa14.55□□□□□ -0.08
CHMP3-201ENST00000263856 AOPEPQ8N6M6 819 aa14.55□□□□□ -0.08
CHMP3-201ENST00000263856 FSIP1Q8NA03 581 aa14.55□□□□□ -0.08
CHMP3-201ENST00000263856 CCDC85AQ96PX6 553 aaPredicted RBP14.55□□□□□ -0.08
CHMP3-201ENST00000263856 HMG20BQ9P0W2 317 aa14.55□□□□□ -0.08
CHMP3-201ENST00000263856 NCBP1Q09161 790 aaKnown RBP14.55□□□□□ -0.08
CHMP3-201ENST00000263856 KRT32Q14532 448 aa14.55□□□□□ -0.08
CHMP3-201ENST00000263856 CEP135Q66GS9 1140 aa14.55□□□□□ -0.08
CHMP3-201ENST00000263856 KCNB2Q92953 911 aa14.55□□□□□ -0.08
CHMP3-201ENST00000263856 USP28Q96RU2 1077 aa14.55□□□□□ -0.08
CHMP3-201ENST00000263856 POLR3DP05423 398 aaPredicted RBP14.55□□□□□ -0.08
CHMP3-201ENST00000263856 TIMM10P62072 90 aa14.55□□□□□ -0.08
CHMP3-201ENST00000263856 ZNF771Q7L3S4 317 aaPredicted RBP14.55□□□□□ -0.08
CHMP3-201ENST00000263856 KCNH5Q8NCM2 988 aa14.55□□□□□ -0.08
CHMP3-201ENST00000263856 RAPGEF4Q8WZA2 1011 aa14.55□□□□□ -0.08
CHMP3-201ENST00000263856 AXIN2Q9Y2T1 843 aa14.55□□□□□ -0.08
CHMP3-201ENST00000263856 SKILP12757 684 aa14.54□□□□□ -0.08
CHMP3-201ENST00000263856 TTC5Q8N0Z6 440 aa14.54□□□□□ -0.08
CHMP3-201ENST00000263856 GOLPH3LQ9H4A5 285 aa14.54□□□□□ -0.08
CHMP3-201ENST00000263856 RGPD2P0DJD1 1756 aa14.54□□□□□ -0.08
CHMP3-201ENST00000263856 COL15A1P39059 1388 aa14.54□□□□□ -0.08
CHMP3-201ENST00000263856 A0A1B0GVL5 298 aa14.54□□□□□ -0.08
CHMP3-201ENST00000263856 SMC2O95347 1197 aa14.54□□□□□ -0.08
CHMP3-201ENST00000263856 MCMDC2Q4G0Z9 681 aa14.54□□□□□ -0.08
CHMP3-201ENST00000263856 ANKRD13DQ6ZTN6 518 aa14.54□□□□□ -0.08
CHMP3-201ENST00000263856 PLA2G4DQ86XP0 818 aa14.54□□□□□ -0.08
CHMP3-201ENST00000263856 TDRD7Q8NHU6 1098 aaKnown RBP14.54□□□□□ -0.08
CHMP3-201ENST00000263856 MED23Q9ULK4 1368 aa14.53□□□□□ -0.08
CHMP3-201ENST00000263856 DMTNQ08495 405 aa14.53□□□□□ -0.08
CHMP3-201ENST00000263856 STOX1Q6ZVD7 989 aa14.53□□□□□ -0.08
CHMP3-201ENST00000263856 SNRKQ9NRH2 765 aa14.53□□□□□ -0.08
CHMP3-201ENST00000263856 ZNF790Q6PG37 636 aa14.53□□□□□ -0.08
CHMP3-201ENST00000263856 LMBR1LQ6UX01 489 aa14.53□□□□□ -0.08
CHMP3-201ENST00000263856 ZNF496Q96IT1 587 aaPredicted RBP14.53□□□□□ -0.08
CHMP3-201ENST00000263856 U3KPZ7 1027 aaPredicted RBP14.53□□□□□ -0.08
CHMP3-201ENST00000263856 CCDC69A6NI79 296 aa14.53□□□□□ -0.08
CHMP3-201ENST00000263856 SMTNL1A8MU46 457 aa14.53□□□□□ -0.08
CHMP3-201ENST00000263856 PTPN14Q15678 1187 aa14.53□□□□□ -0.08
CHMP3-201ENST00000263856 STX1AQ16623 288 aa14.53□□□□□ -0.08
CHMP3-201ENST00000263856 GPHNQ9NQX3 736 aaPredicted RBP14.53□□□□□ -0.08
CHMP3-201ENST00000263856 LTN1O94822 1766 aa14.52□□□□□ -0.08
CHMP3-201ENST00000263856 FKBP4Q02790 459 aaKnown RBP eCLIP14.52□□□□□ -0.08
CHMP3-201ENST00000263856 GORABQ5T7V8 394 aa14.52□□□□□ -0.08
CHMP3-201ENST00000263856 TTLL5Q6EMB2 1281 aa14.52□□□□□ -0.08
CHMP3-201ENST00000263856 ZNF609O15014 1411 aa14.52□□□□□ -0.09
CHMP3-201ENST00000263856 PTPN12Q05209 780 aaKnown RBP14.51□□□□□ -0.09
CHMP3-201ENST00000263856 PDIA6Q15084 440 aa14.51□□□□□ -0.09
CHMP3-201ENST00000263856 GJB4Q9NTQ9 266 aa14.51□□□□□ -0.09
CHMP3-201ENST00000263856 WASHC4Q2M389 1173 aa14.51□□□□□ -0.09
CHMP3-201ENST00000263856 LRRC8AQ8IWT6 810 aa14.51□□□□□ -0.09
CHMP3-201ENST00000263856 ZNF594Q96JF6 807 aaPredicted RBP14.51□□□□□ -0.09
CHMP3-201ENST00000263856 ZSCAN16Q9H4T2 348 aaPredicted RBP14.51□□□□□ -0.09
CHMP3-201ENST00000263856 STK38Q15208 465 aa14.5□□□□□ -0.09
CHMP3-201ENST00000263856 NSUN7Q8NE18 718 aaKnown RBP14.5□□□□□ -0.09
CHMP3-201ENST00000263856 ATP5JP18859 108 aa14.5□□□□□ -0.09
CHMP3-201ENST00000263856 PTPN21Q16825 1174 aa14.5□□□□□ -0.09
CHMP3-201ENST00000263856 METTL22Q9BUU2 404 aaPredicted RBP14.5□□□□□ -0.09
CHMP3-201ENST00000263856 CEP57L1Q8IYX8 460 aa14.5□□□□□ -0.09
CHMP3-201ENST00000263856 STK11IPQ8N1F8 1099 aa14.5□□□□□ -0.09
CHMP3-201ENST00000263856 ZNF215Q9UL58 517 aaPredicted RBP14.5□□□□□ -0.09
CHMP3-201ENST00000263856 DHX32Q7L7V1 743 aaKnown RBP14.49□□□□□ -0.09
CHMP3-201ENST00000263856 ANKRD7Q92527 254 aa14.49□□□□□ -0.09
CHMP3-201ENST00000263856 IQCB1Q15051 598 aa14.48□□□□□ -0.09
CHMP3-201ENST00000263856 TMC6Q7Z403 805 aa14.48□□□□□ -0.09
CHMP3-201ENST00000263856 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.48□□□□□ -0.09
CHMP3-201ENST00000263856 DDX17Q92841 729 aaKnown RBP14.48□□□□□ -0.09
CHMP3-201ENST00000263856 ZNF396Q96N95 335 aaPredicted RBP14.48□□□□□ -0.09
CHMP3-201ENST00000263856 ANO10Q9NW15 660 aa14.48□□□□□ -0.09
CHMP3-201ENST00000263856 PAG1Q9NWQ8 432 aa14.48□□□□□ -0.09
CHMP3-201ENST00000263856 PDIA4P13667 645 aaKnown RBP14.48□□□□□ -0.09
CHMP3-201ENST00000263856 CHRNA2Q15822 529 aa14.48□□□□□ -0.09
CHMP3-201ENST00000263856 ZBTB3Q9H5J0 574 aa14.48□□□□□ -0.09
CHMP3-201ENST00000263856 CTIFO43310 598 aaKnown RBP14.48□□□□□ -0.09
CHMP3-201ENST00000263856 CTDNEP1O95476 244 aa14.48□□□□□ -0.09
CHMP3-201ENST00000263856 IFIT1P09914 478 aaKnown RBP14.48□□□□□ -0.09
CHMP3-201ENST00000263856 ELF2Q15723 593 aa14.48□□□□□ -0.09
CHMP3-201ENST00000263856 HSP90AA4PQ58FG1 418 aa14.48□□□□□ -0.09
CHMP3-201ENST00000263856 ARHGEF25Q86VW2 580 aa14.47□□□□□ -0.09
CHMP3-201ENST00000263856 FAM177A1Q8N128 213 aaPredicted RBP14.47□□□□□ -0.09
CHMP3-201ENST00000263856 CABLES1Q8TDN4 633 aa14.47□□□□□ -0.09
CHMP3-201ENST00000263856 PAXBP1Q9Y5B6 917 aa14.47□□□□□ -0.09
CHMP3-201ENST00000263856 E7EWF7 191 aa14.47□□□□□ -0.09
CHMP3-201ENST00000263856 CPLX1O14810 134 aa14.47□□□□□ -0.09
CHMP3-201ENST00000263856 HOMER1Q86YM7 354 aa14.47□□□□□ -0.09
CHMP3-201ENST00000263856 N4BP2Q86UW6 1770 aaPredicted RBP14.47□□□□□ -0.09
CHMP3-201ENST00000263856 RXRAP19793 462 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms