RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 TTLL5Q6EMB2 1281 aa19.53■□□□□ 0.72
ZNF541-201ENST00000263351 ZNF592Q92610 1267 aa19.53■□□□□ 0.72
ZNF541-201ENST00000263351 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.53■□□□□ 0.72
ZNF541-201ENST00000263351 V9GYY5 206 aaPredicted RBP19.53■□□□□ 0.72
ZNF541-201ENST00000263351 ELP1O95163 1332 aa19.53■□□□□ 0.72
ZNF541-201ENST00000263351 DDX58O95786 925 aaKnown RBP19.52■□□□□ 0.72
ZNF541-201ENST00000263351 AMOTQ4VCS5 1084 aa19.52■□□□□ 0.72
ZNF541-201ENST00000263351 ZNF594Q96JF6 807 aaPredicted RBP19.52■□□□□ 0.72
ZNF541-201ENST00000263351 NEUROD6Q96NK8 337 aa19.52■□□□□ 0.72
ZNF541-201ENST00000263351 NPHP3Q7Z494 1330 aa19.52■□□□□ 0.72
ZNF541-201ENST00000263351 GOLIM4O00461 696 aa19.52■□□□□ 0.72
ZNF541-201ENST00000263351 KCNH5Q8NCM2 988 aa19.51■□□□□ 0.71
ZNF541-201ENST00000263351 SCAND2PQ9GZW5 306 aaPredicted RBP19.51■□□□□ 0.71
ZNF541-201ENST00000263351 SNRKQ9NRH2 765 aa19.51■□□□□ 0.71
ZNF541-201ENST00000263351 CLIP2Q9UDT6 1046 aa19.51■□□□□ 0.71
ZNF541-201ENST00000263351 C5P01031 1676 aa19.51■□□□□ 0.71
ZNF541-201ENST00000263351 RGPD5Q99666 1765 aa19.51■□□□□ 0.71
ZNF541-201ENST00000263351 PDCP20941 246 aa19.51■□□□□ 0.71
ZNF541-201ENST00000263351 ADD1P35611 737 aaKnown RBP19.51■□□□□ 0.71
ZNF541-201ENST00000263351 PLA2G4DQ86XP0 818 aa19.51■□□□□ 0.71
ZNF541-201ENST00000263351 USP28Q96RU2 1077 aa19.51■□□□□ 0.71
ZNF541-201ENST00000263351 NEXNQ0ZGT2 675 aa19.5■□□□□ 0.71
ZNF541-201ENST00000263351 ANKRD13DQ6ZTN6 518 aa19.5■□□□□ 0.71
ZNF541-201ENST00000263351 KDM6AO15550 1401 aaPredicted RBP19.5■□□□□ 0.71
ZNF541-201ENST00000263351 A0A087WZG4 1122 aa19.5■□□□□ 0.71
ZNF541-201ENST00000263351 HIP1O00291 1037 aa19.5■□□□□ 0.71
ZNF541-201ENST00000263351 CHRNA2Q15822 529 aa19.5■□□□□ 0.71
ZNF541-201ENST00000263351 CCDC85AQ96PX6 553 aaPredicted RBP19.5■□□□□ 0.71
ZNF541-201ENST00000263351 METTL22Q9BUU2 404 aaPredicted RBP19.5■□□□□ 0.71
ZNF541-201ENST00000263351 ZSCAN20P17040 1043 aaPredicted RBP19.49■□□□□ 0.71
ZNF541-201ENST00000263351 LMBR1LQ6UX01 489 aa19.49■□□□□ 0.71
ZNF541-201ENST00000263351 LRP10Q7Z4F1 713 aa19.49■□□□□ 0.71
ZNF541-201ENST00000263351 FILIP1Q7Z7B0 1213 aa19.49■□□□□ 0.71
ZNF541-201ENST00000263351 PDCL2Q8N4E4 241 aa19.49■□□□□ 0.71
ZNF541-201ENST00000263351 NSUN7Q8NE18 718 aaKnown RBP19.49■□□□□ 0.71
ZNF541-201ENST00000263351 TRMT1Q9NXH9 659 aaKnown RBP19.49■□□□□ 0.71
ZNF541-201ENST00000263351 ANKRD1Q15327 319 aa19.48■□□□□ 0.71
ZNF541-201ENST00000263351 USPL1Q5W0Q7 1092 aa19.48■□□□□ 0.71
ZNF541-201ENST00000263351 ILDR1Q86SU0 546 aaPredicted RBP19.48■□□□□ 0.71
ZNF541-201ENST00000263351 CCAR1Q8IX12 1150 aaKnown RBP19.48■□□□□ 0.71
ZNF541-201ENST00000263351 PTPDC1A2A3K4 754 aa19.48■□□□□ 0.71
ZNF541-201ENST00000263351 ATP5JP18859 108 aa19.48■□□□□ 0.71
ZNF541-201ENST00000263351 HAND2P61296 217 aa19.48■□□□□ 0.71
ZNF541-201ENST00000263351 NCBP1Q09161 790 aaKnown RBP19.48■□□□□ 0.71
ZNF541-201ENST00000263351 SLC52A2Q9HAB3 445 aa19.48■□□□□ 0.71
ZNF541-201ENST00000263351 DDX19AQ9NUU7 478 aaKnown RBP19.48■□□□□ 0.71
ZNF541-201ENST00000263351 CHD2O14647 1828 aaKnown RBP19.48■□□□□ 0.71
ZNF541-201ENST00000263351 GOLGA6L6A8MZA4 724 aa19.47■□□□□ 0.71
ZNF541-201ENST00000263351 TNNT1P13805 278 aa19.47■□□□□ 0.71
ZNF541-201ENST00000263351 RBM43Q6ZSC3 357 aaKnown RBP19.47■□□□□ 0.71
ZNF541-201ENST00000263351 JCADQ9P266 1359 aa19.47■□□□□ 0.71
ZNF541-201ENST00000263351 IQCB1Q15051 598 aa19.47■□□□□ 0.71
ZNF541-201ENST00000263351 PTPN21Q16825 1174 aa19.47■□□□□ 0.71
ZNF541-201ENST00000263351 LRRC24Q50LG9 513 aa19.47■□□□□ 0.71
ZNF541-201ENST00000263351 TDRD7Q8NHU6 1098 aaKnown RBP19.47■□□□□ 0.71
ZNF541-201ENST00000263351 MCMDC2Q4G0Z9 681 aa19.46■□□□□ 0.71
ZNF541-201ENST00000263351 COPRSQ9NQ92 184 aa19.46■□□□□ 0.71
ZNF541-201ENST00000263351 USP54Q70EL1 1684 aa19.46■□□□□ 0.71
ZNF541-201ENST00000263351 SNW1Q13573 536 aaKnown RBP19.45■□□□□ 0.7
ZNF541-201ENST00000263351 PUS3Q9BZE2 481 aaKnown RBP19.45■□□□□ 0.7
ZNF541-201ENST00000263351 HMG20BQ9P0W2 317 aa19.45■□□□□ 0.7
ZNF541-201ENST00000263351 ERBB3P21860 1342 aa19.45■□□□□ 0.7
ZNF541-201ENST00000263351 CHAF1AQ13111 956 aaPredicted RBP19.45■□□□□ 0.7
ZNF541-201ENST00000263351 TPD52L1Q16890 204 aaPredicted RBP19.45■□□□□ 0.7
ZNF541-201ENST00000263351 ISM2Q6H9L7 571 aa19.45■□□□□ 0.7
ZNF541-201ENST00000263351 MTERF4Q7Z6M4 381 aaKnown RBP19.45■□□□□ 0.7
ZNF541-201ENST00000263351 DENND2AQ9ULE3 1009 aa19.45■□□□□ 0.7
ZNF541-201ENST00000263351 A0A1B0GVL5 298 aa19.44■□□□□ 0.7
ZNF541-201ENST00000263351 TSGA10IPQ3SY00 556 aa19.44■□□□□ 0.7
ZNF541-201ENST00000263351 TTLL7Q6ZT98 887 aa19.44■□□□□ 0.7
ZNF541-201ENST00000263351 NKX2-3Q8TAU0 364 aa19.44■□□□□ 0.7
ZNF541-201ENST00000263351 PHKG2P15735 406 aa19.44■□□□□ 0.7
ZNF541-201ENST00000263351 SMAP1Q8IYB5 467 aaPredicted RBP19.44■□□□□ 0.7
ZNF541-201ENST00000263351 RAPGEF4Q8WZA2 1011 aa19.44■□□□□ 0.7
ZNF541-201ENST00000263351 BIN1O00499 593 aa19.43■□□□□ 0.7
ZNF541-201ENST00000263351 NPHP1O15259 732 aa19.43■□□□□ 0.7
ZNF541-201ENST00000263351 CYP27B1O15528 508 aa19.43■□□□□ 0.7
ZNF541-201ENST00000263351 POLR3DP05423 398 aaPredicted RBP19.43■□□□□ 0.7
ZNF541-201ENST00000263351 KRT28Q7Z3Y7 464 aa19.43■□□□□ 0.7
ZNF541-201ENST00000263351 HAUS7Q99871 368 aa19.43■□□□□ 0.7
ZNF541-201ENST00000263351 FER1L4A9Z1Z3 1794 aa19.43■□□□□ 0.7
ZNF541-201ENST00000263351 ME1P48163 572 aa19.43■□□□□ 0.7
ZNF541-201ENST00000263351 ANKRD7Q92527 254 aa19.43■□□□□ 0.7
ZNF541-201ENST00000263351 LAMA4Q16363 1823 aa19.43■□□□□ 0.7
ZNF541-201ENST00000263351 M0R2C6 588 aa19.42■□□□□ 0.7
ZNF541-201ENST00000263351 PI16Q6UXB8 463 aa19.42■□□□□ 0.7
ZNF541-201ENST00000263351 DHX40Q8IX18 779 aaKnown RBP19.42■□□□□ 0.7
ZNF541-201ENST00000263351 AOPEPQ8N6M6 819 aa19.42■□□□□ 0.7
ZNF541-201ENST00000263351 MEGF6O75095 1541 aa19.42■□□□□ 0.7
ZNF541-201ENST00000263351 CTIFO43310 598 aaKnown RBP19.42■□□□□ 0.7
ZNF541-201ENST00000263351 ATG9AQ7Z3C6 839 aa19.42■□□□□ 0.7
ZNF541-201ENST00000263351 FSIP1Q8NA03 581 aa19.42■□□□□ 0.7
ZNF541-201ENST00000263351 SMARCC2Q8TAQ2 1214 aa19.42■□□□□ 0.7
ZNF541-201ENST00000263351 FMNL2Q96PY5 1086 aa19.42■□□□□ 0.7
ZNF541-201ENST00000263351 ZBTB3Q9H5J0 574 aa19.42■□□□□ 0.7
ZNF541-201ENST00000263351 E7EWF7 191 aa19.41■□□□□ 0.7
ZNF541-201ENST00000263351 CSB-PGBD3P0DP91 1061 aa19.41■□□□□ 0.7
ZNF541-201ENST00000263351 FDPSP14324 419 aaKnown RBP19.41■□□□□ 0.7
ZNF541-201ENST00000263351 SIPA1L3O60292 1781 aaPredicted RBP19.41■□□□□ 0.7
ZNF541-201ENST00000263351 NBPF26B4DH59 902 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms