RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 C16orf45Q96MC5 204 aaPredicted RBP22.82■■□□□ 1.24
SCARB1-201ENST00000261693 SLC52A2Q9HAB3 445 aa22.82■■□□□ 1.24
SCARB1-201ENST00000261693 PLA2G4DQ86XP0 818 aa22.81■■□□□ 1.24
SCARB1-201ENST00000261693 MCMDC2Q4G0Z9 681 aa22.81■■□□□ 1.24
SCARB1-201ENST00000261693 STOX1Q6ZVD7 989 aa22.81■■□□□ 1.24
SCARB1-201ENST00000261693 ANKLE2Q86XL3 938 aa22.81■■□□□ 1.24
SCARB1-201ENST00000261693 U3KPZ7 1027 aaPredicted RBP22.81■■□□□ 1.24
SCARB1-201ENST00000261693 ZSCAN25Q6NSZ9 544 aa22.8■■□□□ 1.24
SCARB1-201ENST00000261693 TDRD7Q8NHU6 1098 aaKnown RBP22.8■■□□□ 1.24
SCARB1-201ENST00000261693 NLRP2Q9NX02 1062 aa22.8■■□□□ 1.24
SCARB1-201ENST00000261693 MRC1P22897 1456 aa22.8■■□□□ 1.24
SCARB1-201ENST00000261693 CBX1P83916 185 aa22.8■■□□□ 1.24
SCARB1-201ENST00000261693 RAPGEF4Q8WZA2 1011 aa22.79■■□□□ 1.24
SCARB1-201ENST00000261693 CLIP2Q9UDT6 1046 aa22.79■■□□□ 1.24
SCARB1-201ENST00000261693 NAP1L2Q9ULW6 460 aaPredicted RBP22.79■■□□□ 1.24
SCARB1-201ENST00000261693 A0A087WWV3 80 aa22.78■■□□□ 1.24
SCARB1-201ENST00000261693 CFAP45Q9UL16 551 aa22.78■■□□□ 1.24
SCARB1-201ENST00000261693 A0A087WZG4 1122 aa22.78■■□□□ 1.24
SCARB1-201ENST00000261693 CCT2P78371 535 aaKnown RBP22.78■■□□□ 1.24
SCARB1-201ENST00000261693 APOBRQ0VD83 1088 aa22.78■■□□□ 1.24
SCARB1-201ENST00000261693 KDM6AO15550 1401 aaPredicted RBP22.78■■□□□ 1.24
SCARB1-201ENST00000261693 ERBB3P21860 1342 aa22.78■■□□□ 1.24
SCARB1-201ENST00000261693 A0A0G2JLW4 131 aa22.78■■□□□ 1.24
SCARB1-201ENST00000261693 ATP2B3Q16720 1220 aa22.78■■□□□ 1.24
SCARB1-201ENST00000261693 CCDC144BQ3MJ40 725 aa22.78■■□□□ 1.24
SCARB1-201ENST00000261693 CCDC144CPQ8IYA2 1237 aa22.78■■□□□ 1.24
SCARB1-201ENST00000261693 SMAP1Q8IYB5 467 aaPredicted RBP22.78■■□□□ 1.24
SCARB1-201ENST00000261693 HAUS7Q99871 368 aa22.78■■□□□ 1.24
SCARB1-201ENST00000261693 C11orf57Q6ZUT1 292 aaPredicted RBP22.77■■□□□ 1.24
SCARB1-201ENST00000261693 NEUROD6Q96NK8 337 aa22.77■■□□□ 1.24
SCARB1-201ENST00000261693 ZSCAN16Q9H4T2 348 aaPredicted RBP22.77■■□□□ 1.24
SCARB1-201ENST00000261693 CACTINQ8WUQ7 758 aaKnown RBP22.77■■□□□ 1.23
SCARB1-201ENST00000261693 PRDM4Q9UKN5 801 aa22.77■■□□□ 1.23
SCARB1-201ENST00000261693 PDCL2Q8N4E4 241 aa22.76■■□□□ 1.23
SCARB1-201ENST00000261693 NCOA5Q9HCD5 579 aaKnown RBP22.76■■□□□ 1.23
SCARB1-201ENST00000261693 AFDNP55196 1824 aaKnown RBP22.76■■□□□ 1.23
SCARB1-201ENST00000261693 GOLIM4O00461 696 aa22.76■■□□□ 1.23
SCARB1-201ENST00000261693 ADD1P35611 737 aaKnown RBP22.76■■□□□ 1.23
SCARB1-201ENST00000261693 LRP10Q7Z4F1 713 aa22.76■■□□□ 1.23
SCARB1-201ENST00000261693 CCAR1Q8IX12 1150 aaKnown RBP22.76■■□□□ 1.23
SCARB1-201ENST00000261693 SLIT3O75094 1523 aa22.75■■□□□ 1.23
SCARB1-201ENST00000261693 CTDNEP1O95476 244 aa22.75■■□□□ 1.23
SCARB1-201ENST00000261693 PHKG2P15735 406 aa22.75■■□□□ 1.23
SCARB1-201ENST00000261693 GUCY1B3Q02153 619 aa22.75■■□□□ 1.23
SCARB1-201ENST00000261693 LMBR1LQ6UX01 489 aa22.75■■□□□ 1.23
SCARB1-201ENST00000261693 CHST3Q7LGC8 479 aa22.75■■□□□ 1.23
SCARB1-201ENST00000261693 NSUN7Q8NE18 718 aaKnown RBP22.75■■□□□ 1.23
SCARB1-201ENST00000261693 GOLPH3LQ9H4A5 285 aa22.75■■□□□ 1.23
SCARB1-201ENST00000261693 SPDYE4A6NLX3 237 aa22.75■■□□□ 1.23
SCARB1-201ENST00000261693 KRT28Q7Z3Y7 464 aa22.75■■□□□ 1.23
SCARB1-201ENST00000261693 TTC5Q8N0Z6 440 aa22.75■■□□□ 1.23
SCARB1-201ENST00000261693 SMARCC2Q8TAQ2 1214 aa22.75■■□□□ 1.23
SCARB1-201ENST00000261693 BCL11BQ9C0K0 894 aaPredicted RBP22.75■■□□□ 1.23
SCARB1-201ENST00000261693 LAMA4Q16363 1823 aa22.75■■□□□ 1.23
SCARB1-201ENST00000261693 PTPDC1A2A3K4 754 aa22.74■■□□□ 1.23
SCARB1-201ENST00000261693 GOLGA6L19H0YKK7 550 aa22.74■■□□□ 1.23
SCARB1-201ENST00000261693 PFKFB2O60825 505 aa22.74■■□□□ 1.23
SCARB1-201ENST00000261693 RABL6Q3YEC7 729 aaPredicted RBP22.74■■□□□ 1.23
SCARB1-201ENST00000261693 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.74■■□□□ 1.23
SCARB1-201ENST00000261693 ERCC4Q92889 916 aaPredicted RBP22.74■■□□□ 1.23
SCARB1-201ENST00000261693 FBXW7Q969H0 707 aa22.74■■□□□ 1.23
SCARB1-201ENST00000261693 SNRPA1P09661 255 aaKnown RBP22.74■■□□□ 1.23
SCARB1-201ENST00000261693 ARID5BQ14865 1188 aa22.74■■□□□ 1.23
SCARB1-201ENST00000261693 DHX32Q7L7V1 743 aaKnown RBP22.74■■□□□ 1.23
SCARB1-201ENST00000261693 KBTBD3Q8NAB2 608 aa22.74■■□□□ 1.23
SCARB1-201ENST00000261693 TNNT1P13805 278 aa22.73■■□□□ 1.23
SCARB1-201ENST00000261693 IQCB1Q15051 598 aa22.73■■□□□ 1.23
SCARB1-201ENST00000261693 CTIFO43310 598 aaKnown RBP22.73■■□□□ 1.23
SCARB1-201ENST00000261693 TIMM10P62072 90 aa22.73■■□□□ 1.23
SCARB1-201ENST00000261693 USP28Q96RU2 1077 aa22.73■■□□□ 1.23
SCARB1-201ENST00000261693 SCN11AQ9UI33 1791 aa22.72■■□□□ 1.23
SCARB1-201ENST00000261693 ADAMTS7Q9UKP4 1686 aa22.72■■□□□ 1.23
SCARB1-201ENST00000261693 TATP17735 454 aaPredicted RBP22.72■■□□□ 1.23
SCARB1-201ENST00000261693 TPD52L1Q16890 204 aaPredicted RBP22.72■■□□□ 1.23
SCARB1-201ENST00000261693 ANKRD7Q92527 254 aa22.71■■□□□ 1.23
SCARB1-201ENST00000261693 CAMTA1Q9Y6Y1 1673 aa22.71■■□□□ 1.23
SCARB1-201ENST00000261693 U2AF2P26368 475 aaKnown RBP eCLIP22.71■■□□□ 1.233e-14■■■■□ 21.3
SCARB1-201ENST00000261693 LLPHQ9BRT6 129 aaKnown RBP22.71■■□□□ 1.23
SCARB1-201ENST00000261693 PAG1Q9NWQ8 432 aa22.71■■□□□ 1.23
SCARB1-201ENST00000261693 RCOR1Q9UKL0 485 aa22.71■■□□□ 1.23
SCARB1-201ENST00000261693 SNW1Q13573 536 aaKnown RBP22.7■■□□□ 1.22
SCARB1-201ENST00000261693 ZNF592Q92610 1267 aa22.7■■□□□ 1.22
SCARB1-201ENST00000261693 STX1AQ16623 288 aa22.7■■□□□ 1.22
SCARB1-201ENST00000261693 MYH15Q9Y2K3 1946 aa22.7■■□□□ 1.22
SCARB1-201ENST00000261693 SH3TC1Q8TE82 1336 aa22.7■■□□□ 1.22
SCARB1-201ENST00000261693 HMGB1P09429 215 aaKnown RBP22.69■■□□□ 1.22
SCARB1-201ENST00000261693 ME1P48163 572 aa22.69■■□□□ 1.22
SCARB1-201ENST00000261693 NAA30Q147X3 362 aaPredicted RBP22.69■■□□□ 1.22
SCARB1-201ENST00000261693 NAA16Q6N069 864 aaPredicted RBP22.69■■□□□ 1.22
SCARB1-201ENST00000261693 CCDC73Q6ZRK6 1079 aa22.69■■□□□ 1.22
SCARB1-201ENST00000261693 RFX7Q2KHR2 1363 aa22.69■■□□□ 1.22
SCARB1-201ENST00000261693 CSB-PGBD3P0DP91 1061 aa22.69■■□□□ 1.22
SCARB1-201ENST00000261693 BECN2A8MW95 431 aa22.68■■□□□ 1.22
SCARB1-201ENST00000261693 E7EWF7 191 aa22.68■■□□□ 1.22
SCARB1-201ENST00000261693 CASP7P55210 303 aa22.68■■□□□ 1.22
SCARB1-201ENST00000261693 NCBP1Q09161 790 aaKnown RBP22.68■■□□□ 1.22
SCARB1-201ENST00000261693 LRRC8AQ8IWT6 810 aa22.68■■□□□ 1.22
SCARB1-201ENST00000261693 IFNL2Q8IZJ0 200 aa22.68■■□□□ 1.22
SCARB1-201ENST00000261693 FMNL2Q96PY5 1086 aa22.68■■□□□ 1.22
SCARB1-201ENST00000261693 KINO60870 393 aaKnown RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 647.4 ms