RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 KCNMB2Q9Y691 235 aa9.61□□□□□ -0.87
TRA2B-201ENST00000259043 PERM1Q5SV97 790 aa9.6□□□□□ -0.87
TRA2B-201ENST00000259043 ELMSAN1Q6PJG2 1045 aa9.6□□□□□ -0.87
TRA2B-201ENST00000259043 DHX32Q7L7V1 743 aaKnown RBP9.6□□□□□ -0.87
TRA2B-201ENST00000259043 TRPM4Q8TD43 1214 aa9.6□□□□□ -0.87
TRA2B-201ENST00000259043 ZBTB42B2RXF5 422 aa9.59□□□□□ -0.87
TRA2B-201ENST00000259043 ZBTB39O15060 712 aa9.59□□□□□ -0.87
TRA2B-201ENST00000259043 TARSP26639 723 aaKnown RBP9.59□□□□□ -0.87
TRA2B-201ENST00000259043 RGL4Q8IZJ4 473 aa9.59□□□□□ -0.87
TRA2B-201ENST00000259043 ARID3AQ99856 593 aa9.59□□□□□ -0.87
TRA2B-201ENST00000259043 STIM2Q9P246 746 aa9.59□□□□□ -0.87
TRA2B-201ENST00000259043 TRIP4Q15650 581 aaPredicted RBP9.58□□□□□ -0.88
TRA2B-201ENST00000259043 PRR23CQ6ZRP0 262 aa9.58□□□□□ -0.88
TRA2B-201ENST00000259043 MEGF10Q96KG7 1140 aa9.58□□□□□ -0.88
TRA2B-201ENST00000259043 SASH3O75995 380 aa9.57□□□□□ -0.88
TRA2B-201ENST00000259043 GPLD1P80108 840 aa9.57□□□□□ -0.88
TRA2B-201ENST00000259043 PLAURQ03405 335 aa9.57□□□□□ -0.88
TRA2B-201ENST00000259043 KRT25Q7Z3Z0 450 aa9.57□□□□□ -0.88
TRA2B-201ENST00000259043 SLC51AQ86UW1 340 aa9.57□□□□□ -0.88
TRA2B-201ENST00000259043 CMTR1Q8N1G2 835 aaKnown RBP9.57□□□□□ -0.88
TRA2B-201ENST00000259043 GOLGA2P5Q9HBQ8 144 aa9.57□□□□□ -0.88
TRA2B-201ENST00000259043 USTQ9Y2C2 406 aa9.57□□□□□ -0.88
TRA2B-201ENST00000259043 XYLBO75191 536 aa9.56□□□□□ -0.88
TRA2B-201ENST00000259043 ZAP70P43403 619 aa9.56□□□□□ -0.88
TRA2B-201ENST00000259043 KRTAP19-1Q8IUB9 90 aa9.56□□□□□ -0.88
TRA2B-201ENST00000259043 HELQQ8TDG4 1101 aa9.56□□□□□ -0.88
TRA2B-201ENST00000259043 DLL1O00548 723 aa9.55□□□□□ -0.88
TRA2B-201ENST00000259043 DEAF1O75398 565 aaPredicted RBP9.55□□□□□ -0.88
TRA2B-201ENST00000259043 RARAP10276 462 aa9.55□□□□□ -0.88
TRA2B-201ENST00000259043 ARID4AP29374 1257 aaPredicted RBP9.55□□□□□ -0.88
TRA2B-201ENST00000259043 BTBD11A6QL63 1104 aa9.54□□□□□ -0.88
TRA2B-201ENST00000259043 MLLT1Q03111 559 aaPredicted RBP9.54□□□□□ -0.88
TRA2B-201ENST00000259043 MCTP1Q6DN14 999 aa9.54□□□□□ -0.88
TRA2B-201ENST00000259043 DZIP1LQ8IYY4 767 aaKnown RBP9.54□□□□□ -0.88
TRA2B-201ENST00000259043 ABTB2Q8N961 1025 aa9.54□□□□□ -0.88
TRA2B-201ENST00000259043 SMG9Q9H0W8 520 aaKnown RBP9.54□□□□□ -0.88
TRA2B-201ENST00000259043 GTF3C2Q8WUA4 911 aaPredicted RBP9.53□□□□□ -0.88
TRA2B-201ENST00000259043 AKTIPQ9H8T0 292 aa9.53□□□□□ -0.88
TRA2B-201ENST00000259043 PCMTD2Q9NV79 361 aa9.53□□□□□ -0.88
TRA2B-201ENST00000259043 NRLP54845 237 aa9.52□□□□□ -0.89
TRA2B-201ENST00000259043 TMEM130Q8N3G9 435 aa9.52□□□□□ -0.89
TRA2B-201ENST00000259043 EIF2AK2P19525 551 aaKnown RBP9.51□□□□□ -0.89
TRA2B-201ENST00000259043 FSTP19883 344 aa9.51□□□□□ -0.89
TRA2B-201ENST00000259043 ATCAYQ86WG3 371 aa9.51□□□□□ -0.89
TRA2B-201ENST00000259043 GPR152Q8TDT2 470 aa9.51□□□□□ -0.89
TRA2B-201ENST00000259043 PIK3R5Q8WYR1 880 aa9.51□□□□□ -0.89
TRA2B-201ENST00000259043 MRPL18Q9H0U6 180 aaKnown RBP9.51□□□□□ -0.89
TRA2B-201ENST00000259043 FAM13BQ9NYF5 915 aa9.51□□□□□ -0.89
TRA2B-201ENST00000259043 TLR7Q9NYK1 1049 aaKnown RBP9.51□□□□□ -0.89
TRA2B-201ENST00000259043 MMP20O60882 483 aa9.5□□□□□ -0.89
TRA2B-201ENST00000259043 HOXD8P13378 290 aaPredicted RBP9.5□□□□□ -0.89
TRA2B-201ENST00000259043 NPR3P17342 541 aa9.5□□□□□ -0.89
TRA2B-201ENST00000259043 MTMR3Q13615 1198 aa9.5□□□□□ -0.89
TRA2B-201ENST00000259043 HFE2Q6ZVN8 426 aa9.5□□□□□ -0.89
TRA2B-201ENST00000259043 RETREG2Q8NC44 543 aa9.5□□□□□ -0.89
TRA2B-201ENST00000259043 KRTAP9-9Q9BYP9 154 aa9.5□□□□□ -0.89
TRA2B-201ENST00000259043 KRTAP9-4Q9BYQ2 154 aa9.5□□□□□ -0.89
TRA2B-201ENST00000259043 COL17A1Q9UMD9 1497 aaPredicted RBP9.49□□□□□ -0.89
TRA2B-201ENST00000259043 MPSTP25325 297 aa9.49□□□□□ -0.89
TRA2B-201ENST00000259043 NLRP13Q86W25 1043 aa9.49□□□□□ -0.89
TRA2B-201ENST00000259043 UBAP1LF5GYI3 381 aa9.48□□□□□ -0.89
TRA2B-201ENST00000259043 ALX3O95076 343 aa9.48□□□□□ -0.89
TRA2B-201ENST00000259043 SOX18P35713 384 aa9.48□□□□□ -0.89
TRA2B-201ENST00000259043 DCAF11Q8TEB1 546 aa9.48□□□□□ -0.89
TRA2B-201ENST00000259043 SRA1Q9HD15 236 aaKnown RBP9.48□□□□□ -0.89
TRA2B-201ENST00000259043 F8W735 103 aaPredicted RBP9.47□□□□□ -0.89
TRA2B-201ENST00000259043 SSTR4P31391 388 aa9.47□□□□□ -0.89
TRA2B-201ENST00000259043 PLD4Q96BZ4 506 aa9.47□□□□□ -0.89
TRA2B-201ENST00000259043 LOC102724428A0A0B4J2F2 783 aa9.46□□□□□ -0.9
TRA2B-201ENST00000259043 PAX4O43316 350 aa9.46□□□□□ -0.9
TRA2B-201ENST00000259043 EIF1AXP47813 144 aaKnown RBP9.46□□□□□ -0.9
TRA2B-201ENST00000259043 CD97P48960 835 aa9.46□□□□□ -0.9
TRA2B-201ENST00000259043 SIK1P57059 783 aa9.46□□□□□ -0.9
TRA2B-201ENST00000259043 NOM1Q5C9Z4 860 aaKnown RBP9.46□□□□□ -0.9
TRA2B-201ENST00000259043 MAP4K3Q8IVH8 894 aa9.46□□□□□ -0.9
TRA2B-201ENST00000259043 NUDT16Q96DE0 195 aaKnown RBP9.46□□□□□ -0.9
TRA2B-201ENST00000259043 Q6ZS46 218 aa9.45□□□□□ -0.9
TRA2B-201ENST00000259043 OR13H1Q8NG92 308 aa9.45□□□□□ -0.9
TRA2B-201ENST00000259043 EDEM1Q92611 657 aa9.45□□□□□ -0.9
TRA2B-201ENST00000259043 J3QW42 95 aa9.44□□□□□ -0.9
TRA2B-201ENST00000259043 GHRHP01286 108 aa9.44□□□□□ -0.9
TRA2B-201ENST00000259043 PDGFAP04085 211 aa9.44□□□□□ -0.9
TRA2B-201ENST00000259043 PSAPP07602 524 aa9.44□□□□□ -0.9
TRA2B-201ENST00000259043 GDF6Q6KF10 455 aaPredicted RBP9.44□□□□□ -0.9
TRA2B-201ENST00000259043 IL22RA1Q8N6P7 574 aa9.44□□□□□ -0.9
TRA2B-201ENST00000259043 FNDC3AQ9Y2H6 1198 aaKnown RBP9.44□□□□□ -0.9
TRA2B-201ENST00000259043 GSC2O15499 205 aa9.43□□□□□ -0.9
TRA2B-201ENST00000259043 MZF1P28698 734 aaPredicted RBP9.43□□□□□ -0.9
TRA2B-201ENST00000259043 FKBP4Q02790 459 aaKnown RBP eCLIP9.43□□□□□ -0.9
TRA2B-201ENST00000259043 ZNF211Q13398 564 aaPredicted RBP9.43□□□□□ -0.9
TRA2B-201ENST00000259043 SF3B2Q13435 895 aaKnown RBP9.43□□□□□ -0.9
TRA2B-201ENST00000259043 SETDB1Q15047 1291 aa9.43□□□□□ -0.9
TRA2B-201ENST00000259043 ECM1Q16610 540 aa9.43□□□□□ -0.9
TRA2B-201ENST00000259043 COL13A1Q5TAT6 717 aaPredicted RBP9.43□□□□□ -0.9
TRA2B-201ENST00000259043 PDE12Q6L8Q7 609 aaKnown RBP9.43□□□□□ -0.9
TRA2B-201ENST00000259043 RBSNQ9H1K0 784 aa9.43□□□□□ -0.9
TRA2B-201ENST00000259043 GGNBP2Q9H3C7 697 aa9.43□□□□□ -0.9
TRA2B-201ENST00000259043 MTMR7Q9Y216 660 aa9.43□□□□□ -0.9
TRA2B-201ENST00000259043 DNM1Q05193 864 aaKnown RBP9.42□□□□□ -0.9
TRA2B-201ENST00000259043 B4GALNT3Q6L9W6 998 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms