RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 BCAMP50895 628 aa10.82□□□□□ -0.68
CKAP2-201ENST00000258607 CRKLP46109 303 aaKnown RBP10.82□□□□□ -0.68
CKAP2-201ENST00000258607 GYG1P46976 350 aa10.82□□□□□ -0.68
CKAP2-201ENST00000258607 TCIRG1Q13488 830 aa10.82□□□□□ -0.68
CKAP2-201ENST00000258607 RNF20Q5VTR2 975 aa10.82□□□□□ -0.68
CKAP2-201ENST00000258607 SAMD1Q6SPF0 538 aaPredicted RBP10.82□□□□□ -0.68
CKAP2-201ENST00000258607 NUP133Q8WUM0 1156 aa10.82□□□□□ -0.68
CKAP2-201ENST00000258607 OSBPL3Q9H4L5 887 aa10.82□□□□□ -0.68
CKAP2-201ENST00000258607 RRAGDQ9NQL2 400 aaPredicted RBP10.82□□□□□ -0.68
CKAP2-201ENST00000258607 LRP2BPQ9P2M1 347 aa10.82□□□□□ -0.68
CKAP2-201ENST00000258607 STAP2Q9UGK3 403 aa10.82□□□□□ -0.68
CKAP2-201ENST00000258607 GNPATO15228 680 aa10.81□□□□□ -0.68
CKAP2-201ENST00000258607 FOXO4P98177 505 aa10.81□□□□□ -0.68
CKAP2-201ENST00000258607 GNL2Q13823 731 aaKnown RBP10.81□□□□□ -0.68
CKAP2-201ENST00000258607 L1TD1Q5T7N2 865 aaKnown RBP10.81□□□□□ -0.68
CKAP2-201ENST00000258607 PUS7LQ9H0K6 701 aaKnown RBP10.81□□□□□ -0.68
CKAP2-201ENST00000258607 RAI14Q9P0K7 980 aa10.81□□□□□ -0.68
CKAP2-201ENST00000258607 SALL3Q9BXA9 1300 aa10.81□□□□□ -0.68
CKAP2-201ENST00000258607 OSBP2Q969R2 916 aa10.81□□□□□ -0.68
CKAP2-201ENST00000258607 LMBRD1Q9NUN5 540 aa10.81□□□□□ -0.68
CKAP2-201ENST00000258607 CAMTA1Q9Y6Y1 1673 aa10.81□□□□□ -0.68
CKAP2-201ENST00000258607 ANKRD18BA2A2Z9 1011 aa10.8□□□□□ -0.68
CKAP2-201ENST00000258607 UBE2Q2LH0YL09 131 aa10.8□□□□□ -0.68
CKAP2-201ENST00000258607 M0R2C6 588 aa10.8□□□□□ -0.68
CKAP2-201ENST00000258607 PRKCSHP14314 528 aaPredicted RBP10.8□□□□□ -0.68
CKAP2-201ENST00000258607 DNTTIP2Q5QJE6 756 aaKnown RBP10.8□□□□□ -0.68
CKAP2-201ENST00000258607 SUSD4Q5VX71 490 aa10.8□□□□□ -0.68
CKAP2-201ENST00000258607 MARCH10Q8NA82 808 aaPredicted RBP10.8□□□□□ -0.68
CKAP2-201ENST00000258607 NEK1Q96PY6 1258 aa10.8□□□□□ -0.68
CKAP2-201ENST00000258607 RBSNQ9H1K0 784 aa10.8□□□□□ -0.68
CKAP2-201ENST00000258607 LOC102724428A0A0B4J2F2 783 aa10.8□□□□□ -0.68
CKAP2-201ENST00000258607 CPLX1O14810 134 aa10.8□□□□□ -0.68
CKAP2-201ENST00000258607 SIK1P57059 783 aa10.8□□□□□ -0.68
CKAP2-201ENST00000258607 HSP90AA4PQ58FG1 418 aa10.8□□□□□ -0.68
CKAP2-201ENST00000258607 ATG9AQ7Z3C6 839 aa10.8□□□□□ -0.68
CKAP2-201ENST00000258607 RALYLQ86SE5 291 aaKnown RBP10.8□□□□□ -0.68
CKAP2-201ENST00000258607 NFAT5O94916 1531 aa10.8□□□□□ -0.68
CKAP2-201ENST00000258607 PRKAB2O43741 272 aa10.8□□□□□ -0.68
CKAP2-201ENST00000258607 C17orf53Q8N3J3 647 aaPredicted RBP10.8□□□□□ -0.68
CKAP2-201ENST00000258607 AIFM3Q96NN9 605 aa10.8□□□□□ -0.68
CKAP2-201ENST00000258607 CYP2D7A0A087X1C5 515 aa10.79□□□□□ -0.68
CKAP2-201ENST00000258607 CTDSPL2Q05D32 466 aa10.79□□□□□ -0.68
CKAP2-201ENST00000258607 ITPK1Q13572 414 aa10.79□□□□□ -0.68
CKAP2-201ENST00000258607 ARMT1Q9H993 441 aa10.79□□□□□ -0.68
CKAP2-201ENST00000258607 MCMDC2Q4G0Z9 681 aa10.79□□□□□ -0.68
CKAP2-201ENST00000258607 NLRP10Q86W26 655 aa10.79□□□□□ -0.68
CKAP2-201ENST00000258607 MAGEB6Q8N7X4 407 aa10.79□□□□□ -0.68
CKAP2-201ENST00000258607 SDR42E1Q8WUS8 393 aa10.79□□□□□ -0.68
CKAP2-201ENST00000258607 FMN2Q9NZ56 1722 aa10.79□□□□□ -0.68
CKAP2-201ENST00000258607 USP25Q9UHP3 1055 aa10.79□□□□□ -0.68
CKAP2-201ENST00000258607 F8W031 263 aaPredicted RBP10.79□□□□□ -0.68
CKAP2-201ENST00000258607 MED1Q15648 1581 aaPredicted RBP10.78□□□□□ -0.68
CKAP2-201ENST00000258607 TTC41PQ6P2S7 1318 aa10.78□□□□□ -0.68
CKAP2-201ENST00000258607 STOX1Q6ZVD7 989 aa10.78□□□□□ -0.68
CKAP2-201ENST00000258607 CREBRFQ8IUR6 639 aa10.78□□□□□ -0.68
CKAP2-201ENST00000258607 AIDAQ96BJ3 306 aa10.78□□□□□ -0.68
CKAP2-201ENST00000258607 B4E1Z4 1266 aa10.78□□□□□ -0.68
CKAP2-201ENST00000258607 ERVV-2B6SEH9 535 aa10.78□□□□□ -0.68
CKAP2-201ENST00000258607 IL15P40933 162 aaPredicted RBP10.78□□□□□ -0.68
CKAP2-201ENST00000258607 RFX5P48382 616 aaPredicted RBP10.78□□□□□ -0.68
CKAP2-201ENST00000258607 DRC7Q8IY82 874 aa10.78□□□□□ -0.68
CKAP2-201ENST00000258607 KLHL34Q8N239 644 aa10.78□□□□□ -0.68
CKAP2-201ENST00000258607 CCDC191Q8NCU4 936 aa10.78□□□□□ -0.68
CKAP2-201ENST00000258607 PHKBQ93100 1093 aa10.78□□□□□ -0.68
CKAP2-201ENST00000258607 BABAM1Q9NWV8 329 aa10.78□□□□□ -0.68
CKAP2-201ENST00000258607 XRN1Q8IZH2 1706 aaKnown RBP10.78□□□□□ -0.68
CKAP2-201ENST00000258607 BIN1O00499 593 aa10.77□□□□□ -0.68
CKAP2-201ENST00000258607 TDO2P48775 406 aa10.77□□□□□ -0.68
CKAP2-201ENST00000258607 PTPN21Q16825 1174 aa10.77□□□□□ -0.68
CKAP2-201ENST00000258607 USPL1Q5W0Q7 1092 aa10.77□□□□□ -0.68
CKAP2-201ENST00000258607 UIMC1Q96RL1 719 aa10.77□□□□□ -0.68
CKAP2-201ENST00000258607 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.77□□□□□ -0.68
CKAP2-201ENST00000258607 SOS2Q07890 1332 aaPredicted RBP10.77□□□□□ -0.69
CKAP2-201ENST00000258607 CHD2O14647 1828 aaKnown RBP10.77□□□□□ -0.69
CKAP2-201ENST00000258607 ZRSR1Q15695 479 aaKnown RBP10.77□□□□□ -0.69
CKAP2-201ENST00000258607 MSL1Q68DK7 614 aa10.77□□□□□ -0.69
CKAP2-201ENST00000258607 C3orf67Q6ZVT6 689 aa10.77□□□□□ -0.69
CKAP2-201ENST00000258607 TTLL11Q8NHH1 800 aa10.77□□□□□ -0.69
CKAP2-201ENST00000258607 COPRSQ9NQ92 184 aa10.77□□□□□ -0.69
CKAP2-201ENST00000258607 GOLGA8BA8MQT2 603 aa10.77□□□□□ -0.69
CKAP2-201ENST00000258607 MCAMP43121 646 aa10.77□□□□□ -0.69
CKAP2-201ENST00000258607 SF3A1Q15459 793 aaKnown RBP10.77□□□□□ -0.69
CKAP2-201ENST00000258607 KIF24Q5T7B8 1368 aa10.76□□□□□ -0.69
CKAP2-201ENST00000258607 UBN2Q6ZU65 1347 aa10.76□□□□□ -0.69
CKAP2-201ENST00000258607 WDR33Q9C0J8 1336 aaKnown RBP10.76□□□□□ -0.69
CKAP2-201ENST00000258607 H7C1W4 665 aa10.76□□□□□ -0.69
CKAP2-201ENST00000258607 GPAA1O43292 621 aa10.76□□□□□ -0.69
CKAP2-201ENST00000258607 HSPD1P10809 573 aaKnown RBP10.76□□□□□ -0.69
CKAP2-201ENST00000258607 CYP19A1P11511 503 aaPredicted RBP10.76□□□□□ -0.69
CKAP2-201ENST00000258607 SPECC1Q5M775 1068 aa10.76□□□□□ -0.69
CKAP2-201ENST00000258607 LRP10Q7Z4F1 713 aa10.76□□□□□ -0.69
CKAP2-201ENST00000258607 KBTBD3Q8NAB2 608 aa10.76□□□□□ -0.69
CKAP2-201ENST00000258607 MAST3O60307 1309 aa10.76□□□□□ -0.69
CKAP2-201ENST00000258607 KLF18A0A0U1RQI7 1052 aa10.76□□□□□ -0.69
CKAP2-201ENST00000258607 ZSCAN22P10073 491 aaPredicted RBP10.76□□□□□ -0.69
CKAP2-201ENST00000258607 MRE11P49959 708 aa10.76□□□□□ -0.69
CKAP2-201ENST00000258607 GIGYF2Q6Y7W6 1299 aaKnown RBP10.76□□□□□ -0.69
CKAP2-201ENST00000258607 NKX2-3Q8TAU0 364 aa10.76□□□□□ -0.69
CKAP2-201ENST00000258607 SENP2Q9HC62 589 aa10.76□□□□□ -0.69
CKAP2-201ENST00000258607 CIZ1Q9ULV3 898 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms