RNA–Protein interactions for RNA: ENST00000257189.4

DSG3-201, Transcript of desmoglein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG3, Length 5,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG3-201ENST00000257189 TTC21AQ8NDW8 1320 aa9.34□□□□□ -0.91
DSG3-201ENST00000257189 PABPN1LA6NDY0 278 aaKnown RBP9.34□□□□□ -0.91
DSG3-201ENST00000257189 EXOSC9Q06265 439 aaKnown RBP9.34□□□□□ -0.91
DSG3-201ENST00000257189 MAP7Q14244 749 aa9.34□□□□□ -0.91
DSG3-201ENST00000257189 KLHL10Q6JEL2 608 aa9.34□□□□□ -0.91
DSG3-201ENST00000257189 CWC25Q9NXE8 425 aaPredicted RBP9.34□□□□□ -0.91
DSG3-201ENST00000257189 SSBP05455 408 aaKnown RBP eCLIP9.34□□□□□ -0.91
DSG3-201ENST00000257189 VAV2P52735 878 aa9.34□□□□□ -0.91
DSG3-201ENST00000257189 WHAMMP3Q1A5X7 153 aa9.34□□□□□ -0.91
DSG3-201ENST00000257189 FAM83GA6ND36 823 aa9.33□□□□□ -0.92
DSG3-201ENST00000257189 PPFIA3O75145 1194 aa9.33□□□□□ -0.92
DSG3-201ENST00000257189 GLRX3O76003 335 aaKnown RBP9.33□□□□□ -0.92
DSG3-201ENST00000257189 CASTP20810 708 aaKnown RBP9.33□□□□□ -0.92
DSG3-201ENST00000257189 ERCC6LQ2NKX8 1250 aa9.33□□□□□ -0.92
DSG3-201ENST00000257189 C8orf76Q96K31 380 aa9.33□□□□□ -0.92
DSG3-201ENST00000257189 NPHP4O75161 1426 aaPredicted RBP9.33□□□□□ -0.92
DSG3-201ENST00000257189 INPP5BP32019 993 aa9.33□□□□□ -0.92
DSG3-201ENST00000257189 PCK1P35558 622 aa9.33□□□□□ -0.92
DSG3-201ENST00000257189 ATP6V1AP38606 617 aa9.33□□□□□ -0.92
DSG3-201ENST00000257189 MTIF2P46199 727 aaKnown RBP9.33□□□□□ -0.92
DSG3-201ENST00000257189 ANKIB1Q9P2G1 1089 aa9.33□□□□□ -0.92
DSG3-201ENST00000257189 MRVI1Q9Y6F6 885 aa9.33□□□□□ -0.92
DSG3-201ENST00000257189 PLCH2O75038 1416 aa9.33□□□□□ -0.92
DSG3-201ENST00000257189 UNC13AQ9UPW8 1703 aa9.33□□□□□ -0.92
DSG3-201ENST00000257189 SKILP12757 684 aa9.33□□□□□ -0.92
DSG3-201ENST00000257189 IGHMBP2P38935 993 aaKnown RBP9.33□□□□□ -0.92
DSG3-201ENST00000257189 TPD52P55327 224 aaPredicted RBP9.33□□□□□ -0.92
DSG3-201ENST00000257189 MCM6Q14566 821 aa9.33□□□□□ -0.92
DSG3-201ENST00000257189 ZNF365Q70YC5 407 aa9.33□□□□□ -0.92
DSG3-201ENST00000257189 ATF5Q9Y2D1 282 aaPredicted RBP9.33□□□□□ -0.92
DSG3-201ENST00000257189 BAG4O95429 457 aaKnown RBP9.33□□□□□ -0.92
DSG3-201ENST00000257189 PDE6BP35913 854 aa9.33□□□□□ -0.92
DSG3-201ENST00000257189 CCDC40Q4G0X9 1142 aa9.33□□□□□ -0.92
DSG3-201ENST00000257189 INTS8Q75QN2 995 aaKnown RBP9.33□□□□□ -0.92
DSG3-201ENST00000257189 VTI1AQ96AJ9 217 aa9.33□□□□□ -0.92
DSG3-201ENST00000257189 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.33□□□□□ -0.92
DSG3-201ENST00000257189 H0YIN7 160 aa9.33□□□□□ -0.92
DSG3-201ENST00000257189 IRX4P78413 519 aa9.33□□□□□ -0.92
DSG3-201ENST00000257189 ZSCAN23Q3MJ62 389 aa9.33□□□□□ -0.92
DSG3-201ENST00000257189 FSIP1Q8NA03 581 aa9.33□□□□□ -0.92
DSG3-201ENST00000257189 VPS18Q9P253 973 aa9.33□□□□□ -0.92
DSG3-201ENST00000257189 MTRF1LQ9UGC7 380 aaKnown RBP9.33□□□□□ -0.92
DSG3-201ENST00000257189 IL2RBP14784 551 aa9.32□□□□□ -0.92
DSG3-201ENST00000257189 RFC1P35251 1148 aaPredicted RBP9.32□□□□□ -0.92
DSG3-201ENST00000257189 PPP4R3AQ6IN85 833 aa9.32□□□□□ -0.92
DSG3-201ENST00000257189 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.32□□□□□ -0.92
DSG3-201ENST00000257189 KRT86O43790 486 aa9.32□□□□□ -0.92
DSG3-201ENST00000257189 ATP2C2O75185 946 aa9.32□□□□□ -0.92
DSG3-201ENST00000257189 BCAP29Q9UHQ4 241 aa9.32□□□□□ -0.92
DSG3-201ENST00000257189 PPP2R1AP30153 589 aa9.32□□□□□ -0.92
DSG3-201ENST00000257189 NBPF6Q5VWK0 638 aa9.32□□□□□ -0.92
DSG3-201ENST00000257189 NBPF5PQ86XG9 351 aaPredicted RBP9.32□□□□□ -0.92
DSG3-201ENST00000257189 TNS4Q8IZW8 715 aa9.32□□□□□ -0.92
DSG3-201ENST00000257189 AFAP1L1Q8TED9 768 aa9.32□□□□□ -0.92
DSG3-201ENST00000257189 NBPF4Q96M43 638 aa9.32□□□□□ -0.92
DSG3-201ENST00000257189 BUB1BO60566 1050 aaPredicted RBP9.32□□□□□ -0.92
DSG3-201ENST00000257189 LUC7L3O95232 432 aaKnown RBP9.32□□□□□ -0.92
DSG3-201ENST00000257189 TRPC3Q13507 836 aa9.32□□□□□ -0.92
DSG3-201ENST00000257189 AMOTQ4VCS5 1084 aa9.32□□□□□ -0.92
DSG3-201ENST00000257189 CFAP58Q5T655 872 aa9.32□□□□□ -0.92
DSG3-201ENST00000257189 CCDC102BQ68D86 513 aa9.32□□□□□ -0.92
DSG3-201ENST00000257189 ZCRB1Q8TBF4 217 aaKnown RBP9.32□□□□□ -0.92
DSG3-201ENST00000257189 SETDB2Q96T68 719 aa9.32□□□□□ -0.92
DSG3-201ENST00000257189 CNNM1Q9NRU3 951 aa9.32□□□□□ -0.92
DSG3-201ENST00000257189 ATP2A2P16615 1042 aaKnown RBP9.31□□□□□ -0.92
DSG3-201ENST00000257189 TNNC1P63316 161 aa9.31□□□□□ -0.92
DSG3-201ENST00000257189 RBBP5Q15291 538 aaKnown RBP9.31□□□□□ -0.92
DSG3-201ENST00000257189 GBP7Q8N8V2 638 aaPredicted RBP9.31□□□□□ -0.92
DSG3-201ENST00000257189 TBC1D2Q9BYX2 928 aa9.31□□□□□ -0.92
DSG3-201ENST00000257189 DNAI1Q9UI46 699 aa9.31□□□□□ -0.92
DSG3-201ENST00000257189 KIF21BO75037 1637 aa9.31□□□□□ -0.92
DSG3-201ENST00000257189 PTCD1O75127 700 aaKnown RBP9.31□□□□□ -0.92
DSG3-201ENST00000257189 NEDD9Q14511 834 aa9.31□□□□□ -0.92
DSG3-201ENST00000257189 LRCH2Q5VUJ6 765 aa9.31□□□□□ -0.92
DSG3-201ENST00000257189 NECTIN2Q92692 538 aa9.31□□□□□ -0.92
DSG3-201ENST00000257189 SSX2IPQ9Y2D8 614 aa9.31□□□□□ -0.92
DSG3-201ENST00000257189 AKR1B10O60218 316 aa9.31□□□□□ -0.92
DSG3-201ENST00000257189 SEPT12Q8IYM1 358 aa9.31□□□□□ -0.92
DSG3-201ENST00000257189 TSGA10Q9BZW7 698 aa9.31□□□□□ -0.92
DSG3-201ENST00000257189 RIMS2Q9UQ26 1411 aa9.31□□□□□ -0.92
DSG3-201ENST00000257189 SSFA2P28290 1259 aa9.31□□□□□ -0.92
DSG3-201ENST00000257189 ZNF76P36508 570 aa9.31□□□□□ -0.92
DSG3-201ENST00000257189 NOP2P46087 812 aaKnown RBP9.31□□□□□ -0.92
DSG3-201ENST00000257189 KRBA2Q6ZNG9 492 aa9.31□□□□□ -0.92
DSG3-201ENST00000257189 EP400NLQ6ZTU2 488 aa9.31□□□□□ -0.92
DSG3-201ENST00000257189 BANK1Q8NDB2 785 aa9.31□□□□□ -0.92
DSG3-201ENST00000257189 KIF1BPQ96EK5 621 aa9.31□□□□□ -0.92
DSG3-201ENST00000257189 PRKAG2Q9UGJ0 569 aa9.31□□□□□ -0.92
DSG3-201ENST00000257189 TRIM37O94972 964 aa9.3□□□□□ -0.92
DSG3-201ENST00000257189 CFAP70Q5T0N1 1121 aa9.3□□□□□ -0.92
DSG3-201ENST00000257189 PIBF1Q8WXW3 757 aa9.3□□□□□ -0.92
DSG3-201ENST00000257189 SPAG5Q96R06 1193 aa9.3□□□□□ -0.92
DSG3-201ENST00000257189 EHMT1Q9H9B1 1298 aa9.3□□□□□ -0.92
DSG3-201ENST00000257189 STX6O43752 255 aa9.3□□□□□ -0.92
DSG3-201ENST00000257189 GMNNO75496 209 aa9.3□□□□□ -0.92
DSG3-201ENST00000257189 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.3□□□□□ -0.92
DSG3-201ENST00000257189 SUPT20HQ8NEM7 779 aa9.3□□□□□ -0.92
DSG3-201ENST00000257189 CABP1Q9NZU7 370 aa9.3□□□□□ -0.92
DSG3-201ENST00000257189 MX1P20591 662 aa9.3□□□□□ -0.92
DSG3-201ENST00000257189 ARID4AP29374 1257 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms