RNA–Protein interactions for RNA: ENST00000244227.7

SNRNP27-201, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP27, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-201ENST00000244227 KRT27Q7Z3Y8 459 aa16.63■□□□□ 0.25
SNRNP27-201ENST00000244227 ARHGEF1Q92888 912 aaKnown RBP16.63■□□□□ 0.25
SNRNP27-201ENST00000244227 KCNB2Q92953 911 aa16.63■□□□□ 0.25
SNRNP27-201ENST00000244227 PAG1Q9NWQ8 432 aa16.63■□□□□ 0.25
SNRNP27-201ENST00000244227 RTCBQ9Y3I0 505 aaKnown RBP16.63■□□□□ 0.25
SNRNP27-201ENST00000244227 LAMB2P55268 1798 aa16.63■□□□□ 0.25
SNRNP27-201ENST00000244227 PDE8BO95263 885 aa16.62■□□□□ 0.25
SNRNP27-201ENST00000244227 HSP90B1P14625 803 aaKnown RBP16.62■□□□□ 0.25
SNRNP27-201ENST00000244227 NEK4P51957 841 aa16.62■□□□□ 0.25
SNRNP27-201ENST00000244227 ATP2B3Q16720 1220 aa16.62■□□□□ 0.25
SNRNP27-201ENST00000244227 ERFEQ4G0M1 354 aa16.62■□□□□ 0.25
SNRNP27-201ENST00000244227 CCDC152Q4G0S7 254 aa16.62■□□□□ 0.25
SNRNP27-201ENST00000244227 FAM196AQ6ZSG2 479 aa16.62■□□□□ 0.25
SNRNP27-201ENST00000244227 MAP4K1Q92918 833 aa16.62■□□□□ 0.25
SNRNP27-201ENST00000244227 BRWD3Q6RI45 1802 aa16.61■□□□□ 0.25
SNRNP27-201ENST00000244227 GOLIM4O00461 696 aa16.61■□□□□ 0.25
SNRNP27-201ENST00000244227 NECTIN1Q15223 517 aa16.61■□□□□ 0.25
SNRNP27-201ENST00000244227 ZNF589Q86UQ0 364 aaPredicted RBP16.61■□□□□ 0.25
SNRNP27-201ENST00000244227 CHMP5Q9NZZ3 219 aa16.61■□□□□ 0.25
SNRNP27-201ENST00000244227 C4BP0C0L5 1744 aa16.61■□□□□ 0.25
SNRNP27-201ENST00000244227 FGFR2P21802 821 aa16.61■□□□□ 0.25
SNRNP27-201ENST00000244227 CCDC158Q5M9N0 1113 aa16.61■□□□□ 0.25
SNRNP27-201ENST00000244227 SLC10A5Q5PT55 438 aa16.61■□□□□ 0.25
SNRNP27-201ENST00000244227 BICDL1Q6ZP65 573 aa16.61■□□□□ 0.25
SNRNP27-201ENST00000244227 C3orf67Q6ZVT6 689 aa16.61■□□□□ 0.25
SNRNP27-201ENST00000244227 TICAM2Q86XR7 235 aa16.61■□□□□ 0.25
SNRNP27-201ENST00000244227 MROH5Q6ZUA9 1318 aa16.61■□□□□ 0.25
SNRNP27-201ENST00000244227 SCARF1Q14162 830 aa16.6■□□□□ 0.25
SNRNP27-201ENST00000244227 SF3B3Q15393 1217 aaKnown RBP16.6■□□□□ 0.25
SNRNP27-201ENST00000244227 ABCC12Q96J65 1359 aa16.6■□□□□ 0.25
SNRNP27-201ENST00000244227 ZPR1O75312 459 aa16.59■□□□□ 0.25
SNRNP27-201ENST00000244227 TAF5LO75529 589 aa16.59■□□□□ 0.25
SNRNP27-201ENST00000244227 TTC39AQ5SRH9 613 aa16.59■□□□□ 0.25
SNRNP27-201ENST00000244227 SEC62Q99442 399 aaKnown RBP16.59■□□□□ 0.25
SNRNP27-201ENST00000244227 RBM8AQ9Y5S9 174 aaKnown RBP16.59■□□□□ 0.25
SNRNP27-201ENST00000244227 COL4A1P02462 1669 aa16.59■□□□□ 0.25
SNRNP27-201ENST00000244227 GORABQ5T7V8 394 aa16.59■□□□□ 0.25
SNRNP27-201ENST00000244227 PRPF40BQ6NWY9 871 aaKnown RBP16.59■□□□□ 0.25
SNRNP27-201ENST00000244227 HELBQ8NG08 1087 aaPredicted RBP16.59■□□□□ 0.25
SNRNP27-201ENST00000244227 UPF3BQ9BZI7 483 aaKnown RBP16.59■□□□□ 0.25
SNRNP27-201ENST00000244227 FOXD4L1Q9NU39 408 aa16.59■□□□□ 0.25
SNRNP27-201ENST00000244227 SPEF2Q9C093 1822 aa16.58■□□□□ 0.24
SNRNP27-201ENST00000244227 FRAT2O75474 233 aaPredicted RBP16.58■□□□□ 0.24
SNRNP27-201ENST00000244227 SLFNL1Q499Z3 407 aa16.58■□□□□ 0.24
SNRNP27-201ENST00000244227 ZNF512BQ96KM6 892 aaPredicted RBP16.58■□□□□ 0.24
SNRNP27-201ENST00000244227 SETDB2Q96T68 719 aa16.58■□□□□ 0.24
SNRNP27-201ENST00000244227 COL24A1Q17RW2 1714 aa16.58■□□□□ 0.24
SNRNP27-201ENST00000244227 TRIM37O94972 964 aa16.57■□□□□ 0.24
SNRNP27-201ENST00000244227 RBM6P78332 1123 aaKnown RBP16.57■□□□□ 0.24
SNRNP27-201ENST00000244227 PUM3Q15397 648 aaKnown RBP16.57■□□□□ 0.24
SNRNP27-201ENST00000244227 MCMDC2Q4G0Z9 681 aa16.57■□□□□ 0.24
SNRNP27-201ENST00000244227 TRAPPC3LQ5T215 181 aa16.57■□□□□ 0.24
SNRNP27-201ENST00000244227 LPIN2Q92539 896 aa16.57■□□□□ 0.24
SNRNP27-201ENST00000244227 MPHOSPH8Q99549 860 aa16.57■□□□□ 0.24
SNRNP27-201ENST00000244227 CIZ1Q9ULV3 898 aaPredicted RBP16.57■□□□□ 0.24
SNRNP27-201ENST00000244227 MCM2P49736 904 aa16.56■□□□□ 0.24
SNRNP27-201ENST00000244227 FKBP4Q02790 459 aaKnown RBP eCLIP16.56■□□□□ 0.24
SNRNP27-201ENST00000244227 ZMYM1Q5SVZ6 1142 aa16.56■□□□□ 0.24
SNRNP27-201ENST00000244227 CREB3L3Q68CJ9 461 aa16.56■□□□□ 0.24
SNRNP27-201ENST00000244227 ZNF772Q68DY9 489 aaPredicted RBP16.56■□□□□ 0.24
SNRNP27-201ENST00000244227 CCDC129Q6ZRS4 1044 aa16.56■□□□□ 0.24
SNRNP27-201ENST00000244227 IL27Q8NEV9 243 aa16.56■□□□□ 0.24
SNRNP27-201ENST00000244227 TTC14Q96N46 770 aa16.56■□□□□ 0.24
SNRNP27-201ENST00000244227 C4AP0C0L4 1744 aa16.56■□□□□ 0.24
SNRNP27-201ENST00000244227 EP400Q96L91 3159 aa16.56■□□□□ 0.24
SNRNP27-201ENST00000244227 SNAP23O00161 211 aa16.56■□□□□ 0.24
SNRNP27-201ENST00000244227 PHF14O94880 888 aa16.56■□□□□ 0.24
SNRNP27-201ENST00000244227 IGHMBP2P38935 993 aaKnown RBP16.56■□□□□ 0.24
SNRNP27-201ENST00000244227 MCAMP43121 646 aa16.56■□□□□ 0.24
SNRNP27-201ENST00000244227 ZAP70P43403 619 aa16.56■□□□□ 0.24
SNRNP27-201ENST00000244227 ADCK5Q3MIX3 580 aa16.56■□□□□ 0.24
SNRNP27-201ENST00000244227 PI16Q6UXB8 463 aa16.56■□□□□ 0.24
SNRNP27-201ENST00000244227 TMX3Q96JJ7 454 aa16.56■□□□□ 0.24
SNRNP27-201ENST00000244227 NYXQ9GZU5 481 aa16.56■□□□□ 0.24
SNRNP27-201ENST00000244227 HELLSQ9NRZ9 838 aa16.56■□□□□ 0.24
SNRNP27-201ENST00000244227 SLC27A2O14975 620 aa16.55■□□□□ 0.24
SNRNP27-201ENST00000244227 RNF113AO15541 343 aaKnown RBP16.55■□□□□ 0.24
SNRNP27-201ENST00000244227 HSP90AA1P07900 732 aaKnown RBP16.55■□□□□ 0.24
SNRNP27-201ENST00000244227 RFC4P35249 363 aa16.55■□□□□ 0.24
SNRNP27-201ENST00000244227 SLC27A3Q5K4L6 730 aa16.55■□□□□ 0.24
SNRNP27-201ENST00000244227 CCDC102BQ68D86 513 aa16.55■□□□□ 0.24
SNRNP27-201ENST00000244227 ADRA2BP18089 450 aa16.54■□□□□ 0.24
SNRNP27-201ENST00000244227 SSFA2P28290 1259 aa16.54■□□□□ 0.24
SNRNP27-201ENST00000244227 ARID4AP29374 1257 aaPredicted RBP16.54■□□□□ 0.24
SNRNP27-201ENST00000244227 PHKA1P46020 1223 aa16.54■□□□□ 0.24
SNRNP27-201ENST00000244227 NBPF5PQ86XG9 351 aaPredicted RBP16.54■□□□□ 0.24
SNRNP27-201ENST00000244227 PROM2Q8N271 834 aa16.54■□□□□ 0.24
SNRNP27-201ENST00000244227 TM6SF1Q9BZW5 370 aa16.54■□□□□ 0.24
SNRNP27-201ENST00000244227 GTF2E1P29083 439 aaPredicted RBP16.54■□□□□ 0.24
SNRNP27-201ENST00000244227 CHRNDQ07001 517 aa16.54■□□□□ 0.24
SNRNP27-201ENST00000244227 CUL4AQ13619 759 aa16.54■□□□□ 0.24
SNRNP27-201ENST00000244227 CDC5LQ99459 802 aaKnown RBP16.54■□□□□ 0.24
SNRNP27-201ENST00000244227 ZSWIM6Q9HCJ5 1215 aa16.54■□□□□ 0.24
SNRNP27-201ENST00000244227 ARAP2Q8WZ64 1704 aa16.53■□□□□ 0.24
SNRNP27-201ENST00000244227 AKAP11Q9UKA4 1901 aa16.53■□□□□ 0.24
SNRNP27-201ENST00000244227 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.53■□□□□ 0.24
SNRNP27-201ENST00000244227 TSGA10IPQ3SY00 556 aa16.53■□□□□ 0.24
SNRNP27-201ENST00000244227 TPTE2Q6XPS3 522 aa16.53■□□□□ 0.24
SNRNP27-201ENST00000244227 TAF6LQ9Y6J9 622 aa16.53■□□□□ 0.24
SNRNP27-201ENST00000244227 SLC5A1P13866 664 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms