RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 RIC1Q4ADV7 1423 aa19.22■□□□□ 0.67
ITGA4-201ENST00000233573 RC3H1Q5TC82 1133 aaKnown RBP19.22■□□□□ 0.67
ITGA4-201ENST00000233573 TM6SF1Q9BZW5 370 aa19.22■□□□□ 0.67
ITGA4-201ENST00000233573 CEP126Q9P2H0 1117 aa19.22■□□□□ 0.67
ITGA4-201ENST00000233573 SRP68Q9UHB9 627 aaKnown RBP19.22■□□□□ 0.67
ITGA4-201ENST00000233573 SCN7AQ01118 1682 aa19.22■□□□□ 0.67
ITGA4-201ENST00000233573 KBTBD3Q8NAB2 608 aa19.21■□□□□ 0.67
ITGA4-201ENST00000233573 DNAJC2Q99543 621 aaKnown RBP19.21■□□□□ 0.67
ITGA4-201ENST00000233573 RPS6KA4O75676 772 aa19.21■□□□□ 0.67
ITGA4-201ENST00000233573 HCLS1P14317 486 aaPredicted RBP19.21■□□□□ 0.67
ITGA4-201ENST00000233573 ADCK5Q3MIX3 580 aa19.21■□□□□ 0.67
ITGA4-201ENST00000233573 CREB3L3Q68CJ9 461 aa19.21■□□□□ 0.67
ITGA4-201ENST00000233573 TICAM2Q86XR7 235 aa19.21■□□□□ 0.67
ITGA4-201ENST00000233573 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.21■□□□□ 0.67
ITGA4-201ENST00000233573 GREM2Q9H772 168 aa19.21■□□□□ 0.67
ITGA4-201ENST00000233573 ZDHHC9Q9Y397 364 aa19.21■□□□□ 0.67
ITGA4-201ENST00000233573 LRP5O75197 1615 aa19.2■□□□□ 0.66
ITGA4-201ENST00000233573 TAF5LO75529 589 aa19.2■□□□□ 0.66
ITGA4-201ENST00000233573 BCL2L12Q9HB09 334 aa19.2■□□□□ 0.66
ITGA4-201ENST00000233573 ZSWIM6Q9HCJ5 1215 aa19.2■□□□□ 0.66
ITGA4-201ENST00000233573 RIPOR2Q9Y4F9 1068 aa19.2■□□□□ 0.66
ITGA4-201ENST00000233573 DDX46Q7L014 1031 aaKnown RBP19.2■□□□□ 0.66
ITGA4-201ENST00000233573 UTP14AQ9BVJ6 771 aaKnown RBP19.2■□□□□ 0.66
ITGA4-201ENST00000233573 RPAP1Q9BWH6 1393 aaPredicted RBP19.2■□□□□ 0.66
ITGA4-201ENST00000233573 TRAK2O60296 914 aa19.19■□□□□ 0.66
ITGA4-201ENST00000233573 PDE8AO60658 829 aa19.19■□□□□ 0.66
ITGA4-201ENST00000233573 PHF14O94880 888 aa19.19■□□□□ 0.66
ITGA4-201ENST00000233573 CHGBP05060 677 aa19.19■□□□□ 0.66
ITGA4-201ENST00000233573 ITGA6P23229 1130 aa19.19■□□□□ 0.66
ITGA4-201ENST00000233573 AK2P54819 239 aa19.19■□□□□ 0.66
ITGA4-201ENST00000233573 USPL1Q5W0Q7 1092 aa19.19■□□□□ 0.66
ITGA4-201ENST00000233573 BICDL1Q6ZP65 573 aa19.19■□□□□ 0.66
ITGA4-201ENST00000233573 PAG1Q9NWQ8 432 aa19.19■□□□□ 0.66
ITGA4-201ENST00000233573 AKAP2Q9Y2D5 859 aa19.19■□□□□ 0.66
ITGA4-201ENST00000233573 ZNF652Q9Y2D9 606 aa19.19■□□□□ 0.66
ITGA4-201ENST00000233573 SH3TC1Q8TE82 1336 aa19.19■□□□□ 0.66
ITGA4-201ENST00000233573 DDX60Q8IY21 1712 aaKnown RBP19.18■□□□□ 0.66
ITGA4-201ENST00000233573 SLC27A2O14975 620 aa19.18■□□□□ 0.66
ITGA4-201ENST00000233573 NTSR2O95665 410 aa19.18■□□□□ 0.66
ITGA4-201ENST00000233573 CASTP20810 708 aaKnown RBP19.18■□□□□ 0.66
ITGA4-201ENST00000233573 NOL8Q76FK4 1167 aaKnown RBP19.18■□□□□ 0.66
ITGA4-201ENST00000233573 RTCBQ9Y3I0 505 aaKnown RBP19.18■□□□□ 0.66
ITGA4-201ENST00000233573 C4AP0C0L4 1744 aa19.18■□□□□ 0.66
ITGA4-201ENST00000233573 BAG4O95429 457 aaKnown RBP19.18■□□□□ 0.66
ITGA4-201ENST00000233573 PARP10Q53GL7 1025 aa19.18■□□□□ 0.66
ITGA4-201ENST00000233573 RUFY3Q7L099 469 aa19.18■□□□□ 0.66
ITGA4-201ENST00000233573 AK7Q96M32 723 aa19.18■□□□□ 0.66
ITGA4-201ENST00000233573 CPA1P15085 419 aa19.17■□□□□ 0.66
ITGA4-201ENST00000233573 TSGA10IPQ3SY00 556 aa19.17■□□□□ 0.66
ITGA4-201ENST00000233573 TBC1D9BQ66K14 1250 aa19.17■□□□□ 0.66
ITGA4-201ENST00000233573 JAKMIP1Q96N16 626 aaKnown RBP19.17■□□□□ 0.66
ITGA4-201ENST00000233573 RGS17Q9UGC6 210 aaPredicted RBP19.17■□□□□ 0.66
ITGA4-201ENST00000233573 ANKRD18BA2A2Z9 1011 aa19.16■□□□□ 0.66
ITGA4-201ENST00000233573 GOLIM4O00461 696 aa19.16■□□□□ 0.66
ITGA4-201ENST00000233573 ZKSCAN1P17029 563 aaPredicted RBP19.16■□□□□ 0.66
ITGA4-201ENST00000233573 RXRBP28702 533 aa19.16■□□□□ 0.66
ITGA4-201ENST00000233573 ADORA1P30542 326 aa19.16■□□□□ 0.66
ITGA4-201ENST00000233573 TAF7LQ5H9L4 462 aa19.16■□□□□ 0.66
ITGA4-201ENST00000233573 VPS53Q5VIR6 699 aa19.16■□□□□ 0.66
ITGA4-201ENST00000233573 CLEC4GQ6UXB4 293 aa19.16■□□□□ 0.66
ITGA4-201ENST00000233573 VGLL2Q8N8G2 317 aa19.16■□□□□ 0.66
ITGA4-201ENST00000233573 ARHGEF1Q92888 912 aaKnown RBP19.16■□□□□ 0.66
ITGA4-201ENST00000233573 XAGE2Q96GT9 111 aa19.16■□□□□ 0.66
ITGA4-201ENST00000233573 NARFQ9UHQ1 456 aa19.16■□□□□ 0.66
ITGA4-201ENST00000233573 LAMB2P55268 1798 aa19.16■□□□□ 0.66
ITGA4-201ENST00000233573 IFIT1P09914 478 aaKnown RBP19.16■□□□□ 0.66
ITGA4-201ENST00000233573 MCMDC2Q4G0Z9 681 aa19.16■□□□□ 0.66
ITGA4-201ENST00000233573 SEC62Q99442 399 aaKnown RBP19.16■□□□□ 0.66
ITGA4-201ENST00000233573 LIMCH1Q9UPQ0 1083 aa19.15■□□□□ 0.66
ITGA4-201ENST00000233573 LDHAL6AQ6ZMR3 332 aa19.15■□□□□ 0.66
ITGA4-201ENST00000233573 HMG20BQ9P0W2 317 aa19.15■□□□□ 0.66
ITGA4-201ENST00000233573 CYP46A1Q9Y6A2 500 aa19.15■□□□□ 0.66
ITGA4-201ENST00000233573 TAF6LQ9Y6J9 622 aa19.15■□□□□ 0.66
ITGA4-201ENST00000233573 ZPR1O75312 459 aa19.14■□□□□ 0.65
ITGA4-201ENST00000233573 KCNJ4P48050 445 aa19.14■□□□□ 0.65
ITGA4-201ENST00000233573 ZMYM1Q5SVZ6 1142 aa19.14■□□□□ 0.65
ITGA4-201ENST00000233573 CCDC129Q6ZRS4 1044 aa19.14■□□□□ 0.65
ITGA4-201ENST00000233573 HELLSQ9NRZ9 838 aa19.14■□□□□ 0.65
ITGA4-201ENST00000233573 ABCC12Q96J65 1359 aa19.14■□□□□ 0.65
ITGA4-201ENST00000233573 PTMSP20962 102 aa19.13■□□□□ 0.65
ITGA4-201ENST00000233573 COL9A3Q14050 684 aaPredicted RBP19.13■□□□□ 0.65
ITGA4-201ENST00000233573 RNF20Q5VTR2 975 aa19.13■□□□□ 0.65
ITGA4-201ENST00000233573 POTEAQ6S8J7 498 aa19.13■□□□□ 0.65
ITGA4-201ENST00000233573 PDRG1Q9NUG6 133 aa19.13■□□□□ 0.65
ITGA4-201ENST00000233573 AKAP11Q9UKA4 1901 aa19.13■□□□□ 0.65
ITGA4-201ENST00000233573 UBR3Q6ZT12 1888 aa19.13■□□□□ 0.65
ITGA4-201ENST00000233573 BRD1O95696 1058 aa19.13■□□□□ 0.65
ITGA4-201ENST00000233573 ERFEQ4G0M1 354 aa19.13■□□□□ 0.65
ITGA4-201ENST00000233573 CCDC158Q5M9N0 1113 aa19.13■□□□□ 0.65
ITGA4-201ENST00000233573 ATP2B3Q16720 1220 aa19.12■□□□□ 0.65
ITGA4-201ENST00000233573 METTL24Q5JXM2 366 aa19.12■□□□□ 0.65
ITGA4-201ENST00000233573 PROM2Q8N271 834 aa19.12■□□□□ 0.65
ITGA4-201ENST00000233573 ARAP2Q8WZ64 1704 aa19.12■□□□□ 0.65
ITGA4-201ENST00000233573 PSMA5P28066 241 aa19.12■□□□□ 0.65
ITGA4-201ENST00000233573 SLFNL1Q499Z3 407 aa19.12■□□□□ 0.65
ITGA4-201ENST00000233573 C3orf67Q6ZVT6 689 aa19.12■□□□□ 0.65
ITGA4-201ENST00000233573 ALDH8A1Q9H2A2 487 aaPredicted RBP19.12■□□□□ 0.65
ITGA4-201ENST00000233573 SEC31BQ9NQW1 1179 aa19.12■□□□□ 0.65
ITGA4-201ENST00000233573 CASZ1Q86V15 1759 aa19.11■□□□□ 0.65
ITGA4-201ENST00000233573 COL4A1P02462 1669 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms