RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 CCDC144BQ3MJ40 725 aa21.81■■□□□ 1.08
CACTIN-201ENST00000221899 CCDC144CPQ8IYA2 1237 aa21.81■■□□□ 1.08
CACTIN-201ENST00000221899 NFATC2IPQ8NCF5 419 aa21.81■■□□□ 1.08
CACTIN-201ENST00000221899 NAP1L2Q9ULW6 460 aaPredicted RBP21.81■■□□□ 1.08
CACTIN-201ENST00000221899 C11orf57Q6ZUT1 292 aaPredicted RBP21.8■■□□□ 1.08
CACTIN-201ENST00000221899 STOX1Q6ZVD7 989 aa21.8■■□□□ 1.08
CACTIN-201ENST00000221899 CACTINQ8WUQ7 758 aaKnown RBP21.8■■□□□ 1.08
CACTIN-201ENST00000221899 RFX5P48382 616 aaPredicted RBP21.8■■□□□ 1.08
CACTIN-201ENST00000221899 ANKRD13DQ6ZTN6 518 aa21.79■■□□□ 1.08
CACTIN-201ENST00000221899 COPRSQ9NQ92 184 aa21.79■■□□□ 1.08
CACTIN-201ENST00000221899 U3KPZ7 1027 aaPredicted RBP21.79■■□□□ 1.08
CACTIN-201ENST00000221899 OVOS2A0A0G2JMS6 1433 aa21.79■■□□□ 1.08
CACTIN-201ENST00000221899 MCMDC2Q4G0Z9 681 aa21.79■■□□□ 1.08
CACTIN-201ENST00000221899 ZNF496Q96IT1 587 aaPredicted RBP21.79■■□□□ 1.08
CACTIN-201ENST00000221899 USP16Q9Y5T5 823 aa21.79■■□□□ 1.08
CACTIN-201ENST00000221899 CCT2P78371 535 aaKnown RBP21.78■■□□□ 1.08
CACTIN-201ENST00000221899 TNNT1P13805 278 aa21.78■■□□□ 1.08
CACTIN-201ENST00000221899 U2AF2P26368 475 aaKnown RBP eCLIP21.78■■□□□ 1.08
CACTIN-201ENST00000221899 ZC3H6P61129 1189 aaKnown RBP21.78■■□□□ 1.08
CACTIN-201ENST00000221899 APOBRQ0VD83 1088 aa21.78■■□□□ 1.08
CACTIN-201ENST00000221899 ARID5BQ14865 1188 aa21.78■■□□□ 1.08
CACTIN-201ENST00000221899 FBXW7Q969H0 707 aa21.78■■□□□ 1.08
CACTIN-201ENST00000221899 CFAP45Q9UL16 551 aa21.78■■□□□ 1.08
CACTIN-201ENST00000221899 A0A0G2JLW4 131 aa21.77■■□□□ 1.08
CACTIN-201ENST00000221899 GUCY1B3Q02153 619 aa21.77■■□□□ 1.08
CACTIN-201ENST00000221899 CCAR1Q8IX12 1150 aaKnown RBP21.77■■□□□ 1.08
CACTIN-201ENST00000221899 GOLPH3LQ9H4A5 285 aa21.77■■□□□ 1.08
CACTIN-201ENST00000221899 FER1L4A9Z1Z3 1794 aa21.77■■□□□ 1.08
CACTIN-201ENST00000221899 GOLGA6L19H0YKK7 550 aa21.77■■□□□ 1.08
CACTIN-201ENST00000221899 ERCC4Q92889 916 aaPredicted RBP21.77■■□□□ 1.08
CACTIN-201ENST00000221899 ZSCAN16Q9H4T2 348 aaPredicted RBP21.77■■□□□ 1.08
CACTIN-201ENST00000221899 SLC52A2Q9HAB3 445 aa21.77■■□□□ 1.08
CACTIN-201ENST00000221899 NCOA5Q9HCD5 579 aaKnown RBP21.77■■□□□ 1.08
CACTIN-201ENST00000221899 MRC1P22897 1456 aa21.77■■□□□ 1.08
CACTIN-201ENST00000221899 CTIFO43310 598 aaKnown RBP21.76■■□□□ 1.07
CACTIN-201ENST00000221899 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.76■■□□□ 1.07
CACTIN-201ENST00000221899 ZHX1Q9UKY1 873 aaPredicted RBP21.76■■□□□ 1.07
CACTIN-201ENST00000221899 TPD52L1Q16890 204 aaPredicted RBP21.76■■□□□ 1.07
CACTIN-201ENST00000221899 ANKRD7Q92527 254 aa21.76■■□□□ 1.07
CACTIN-201ENST00000221899 C5P01031 1676 aa21.76■■□□□ 1.07
CACTIN-201ENST00000221899 A0A087WZG4 1122 aa21.76■■□□□ 1.07
CACTIN-201ENST00000221899 PTPDC1A2A3K4 754 aa21.76■■□□□ 1.07
CACTIN-201ENST00000221899 ADD1P35611 737 aaKnown RBP21.76■■□□□ 1.07
CACTIN-201ENST00000221899 NAA30Q147X3 362 aaPredicted RBP21.76■■□□□ 1.07
CACTIN-201ENST00000221899 CHST3Q7LGC8 479 aa21.76■■□□□ 1.07
CACTIN-201ENST00000221899 NSUN7Q8NE18 718 aaKnown RBP21.76■■□□□ 1.07
CACTIN-201ENST00000221899 ZNF592Q92610 1267 aa21.76■■□□□ 1.07
CACTIN-201ENST00000221899 NEUROD6Q96NK8 337 aa21.76■■□□□ 1.07
CACTIN-201ENST00000221899 NLRP2Q9NX02 1062 aa21.76■■□□□ 1.07
CACTIN-201ENST00000221899 CTDNEP1O95476 244 aa21.75■■□□□ 1.07
CACTIN-201ENST00000221899 ZSCAN20P17040 1043 aaPredicted RBP21.75■■□□□ 1.07
CACTIN-201ENST00000221899 IQCB1Q15051 598 aa21.75■■□□□ 1.07
CACTIN-201ENST00000221899 HAUS7Q99871 368 aa21.75■■□□□ 1.07
CACTIN-201ENST00000221899 GOLIM4O00461 696 aa21.75■■□□□ 1.07
CACTIN-201ENST00000221899 RAPGEF4Q8WZA2 1011 aa21.75■■□□□ 1.07
CACTIN-201ENST00000221899 USP28Q96RU2 1077 aa21.75■■□□□ 1.07
CACTIN-201ENST00000221899 SIPA1L3O60292 1781 aaPredicted RBP21.74■■□□□ 1.07
CACTIN-201ENST00000221899 SMARCC2Q8TAQ2 1214 aa21.74■■□□□ 1.07
CACTIN-201ENST00000221899 NCBP1Q09161 790 aaKnown RBP21.74■■□□□ 1.07
CACTIN-201ENST00000221899 PFKFB2O60825 505 aa21.73■■□□□ 1.07
CACTIN-201ENST00000221899 KDM6AO15550 1401 aaPredicted RBP21.73■■□□□ 1.07
CACTIN-201ENST00000221899 PHRF1Q9P1Y6 1649 aaKnown RBP21.73■■□□□ 1.07
CACTIN-201ENST00000221899 LMBR1LQ6UX01 489 aa21.72■■□□□ 1.07
CACTIN-201ENST00000221899 DHX32Q7L7V1 743 aaKnown RBP21.72■■□□□ 1.07
CACTIN-201ENST00000221899 USP27XA6NNY8 438 aa21.72■■□□□ 1.07
CACTIN-201ENST00000221899 SMTNL1A8MU46 457 aa21.72■■□□□ 1.07
CACTIN-201ENST00000221899 ANKLE2Q86XL3 938 aa21.72■■□□□ 1.07
CACTIN-201ENST00000221899 KBTBD3Q8NAB2 608 aa21.72■■□□□ 1.07
CACTIN-201ENST00000221899 ERBB3P21860 1342 aa21.72■■□□□ 1.07
CACTIN-201ENST00000221899 BECN2A8MW95 431 aa21.71■■□□□ 1.07
CACTIN-201ENST00000221899 STX1AQ16623 288 aa21.71■■□□□ 1.07
CACTIN-201ENST00000221899 CCDC73Q6ZRK6 1079 aa21.71■■□□□ 1.07
CACTIN-201ENST00000221899 LRP10Q7Z4F1 713 aa21.71■■□□□ 1.07
CACTIN-201ENST00000221899 FILIP1Q7Z7B0 1213 aa21.71■■□□□ 1.07
CACTIN-201ENST00000221899 ME1P48163 572 aa21.71■■□□□ 1.07
CACTIN-201ENST00000221899 DMTNQ08495 405 aa21.71■■□□□ 1.07
CACTIN-201ENST00000221899 LRRC8AQ8IWT6 810 aa21.71■■□□□ 1.07
CACTIN-201ENST00000221899 TTC5Q8N0Z6 440 aa21.71■■□□□ 1.07
CACTIN-201ENST00000221899 RCOR1Q9UKL0 485 aa21.71■■□□□ 1.07
CACTIN-201ENST00000221899 TIMM10P62072 90 aa21.7■■□□□ 1.07
CACTIN-201ENST00000221899 SNW1Q13573 536 aaKnown RBP21.7■■□□□ 1.07
CACTIN-201ENST00000221899 KINO60870 393 aaKnown RBP21.7■■□□□ 1.06
CACTIN-201ENST00000221899 PHKG2P15735 406 aa21.7■■□□□ 1.06
CACTIN-201ENST00000221899 RABL6Q3YEC7 729 aaPredicted RBP21.7■■□□□ 1.06
CACTIN-201ENST00000221899 NAA16Q6N069 864 aaPredicted RBP21.7■■□□□ 1.06
CACTIN-201ENST00000221899 FSIP1Q8NA03 581 aa21.7■■□□□ 1.06
CACTIN-201ENST00000221899 CCDC112Q8NEF3 446 aa21.7■■□□□ 1.06
CACTIN-201ENST00000221899 LLPHQ9BRT6 129 aaKnown RBP21.7■■□□□ 1.06
CACTIN-201ENST00000221899 PAG1Q9NWQ8 432 aa21.69■■□□□ 1.06
CACTIN-201ENST00000221899 RGPD5Q99666 1765 aa21.69■■□□□ 1.06
CACTIN-201ENST00000221899 SNRPA1P09661 255 aaKnown RBP21.69■■□□□ 1.06
CACTIN-201ENST00000221899 KRT28Q7Z3Y7 464 aa21.69■■□□□ 1.06
CACTIN-201ENST00000221899 CAVIN2O95810 425 aa21.68■■□□□ 1.06
CACTIN-201ENST00000221899 CDC25BP30305 580 aa21.68■■□□□ 1.06
CACTIN-201ENST00000221899 E7EWF7 191 aa21.68■■□□□ 1.06
CACTIN-201ENST00000221899 HMGB1P09429 215 aaKnown RBP21.68■■□□□ 1.06
CACTIN-201ENST00000221899 CEP135Q66GS9 1140 aa21.68■■□□□ 1.06
CACTIN-201ENST00000221899 ILDR1Q86SU0 546 aaPredicted RBP21.68■■□□□ 1.06
CACTIN-201ENST00000221899 DHX40Q8IX18 779 aaKnown RBP21.68■■□□□ 1.06
CACTIN-201ENST00000221899 TRMT1Q9NXH9 659 aaKnown RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms