RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 GTF3C6Q969F1 213 aa20.43■□□□□ 0.86
USB1-201ENST00000219281 DNAJC2Q99543 621 aaKnown RBP20.43■□□□□ 0.86
USB1-201ENST00000219281 RFX5P48382 616 aaPredicted RBP20.42■□□□□ 0.86
USB1-201ENST00000219281 PTPN12Q05209 780 aaKnown RBP20.42■□□□□ 0.86
USB1-201ENST00000219281 ANKRD13DQ6ZTN6 518 aa20.42■□□□□ 0.86
USB1-201ENST00000219281 Q6ZUG5 572 aa20.42■□□□□ 0.86
USB1-201ENST00000219281 SEC62Q99442 399 aaKnown RBP20.42■□□□□ 0.86
USB1-201ENST00000219281 CBX8Q9HC52 389 aa20.42■□□□□ 0.86
USB1-201ENST00000219281 DDX19AQ9NUU7 478 aaKnown RBP20.42■□□□□ 0.86
USB1-201ENST00000219281 PKD1L3Q7Z443 1732 aa20.42■□□□□ 0.86
USB1-201ENST00000219281 C5P01031 1676 aa20.42■□□□□ 0.86
USB1-201ENST00000219281 SNRPA1P09661 255 aaKnown RBP20.42■□□□□ 0.86
USB1-201ENST00000219281 HSP90B1P14625 803 aaKnown RBP20.42■□□□□ 0.86
USB1-201ENST00000219281 CABP4P57796 275 aa20.42■□□□□ 0.86
USB1-201ENST00000219281 GTF2F1P35269 517 aaKnown RBP eCLIP20.41■□□□□ 0.865e-10■■□□□ 14.3
USB1-201ENST00000219281 BRF1Q92994 677 aa20.41■□□□□ 0.86
USB1-201ENST00000219281 PGBD1Q96JS3 809 aa20.41■□□□□ 0.86
USB1-201ENST00000219281 CLSTN2Q9H4D0 955 aa20.41■□□□□ 0.86
USB1-201ENST00000219281 NR1I2O75469 434 aa20.41■□□□□ 0.86
USB1-201ENST00000219281 PTGS1P23219 599 aa20.41■□□□□ 0.86
USB1-201ENST00000219281 TTC5Q8N0Z6 440 aa20.41■□□□□ 0.86
USB1-201ENST00000219281 BICD2Q8TD16 824 aa20.41■□□□□ 0.86
USB1-201ENST00000219281 DDX11Q96FC9 970 aa20.41■□□□□ 0.86
USB1-201ENST00000219281 UBE3BQ7Z3V4 1068 aa20.4■□□□□ 0.86
USB1-201ENST00000219281 ZCRB1Q8TBF4 217 aaKnown RBP20.4■□□□□ 0.86
USB1-201ENST00000219281 DBNDD2Q9BQY9 259 aa20.4■□□□□ 0.86
USB1-201ENST00000219281 COL5A2P05997 1499 aaPredicted RBP20.4■□□□□ 0.86
USB1-201ENST00000219281 FAM177BA6PVY3 158 aa20.39■□□□□ 0.86
USB1-201ENST00000219281 RESTQ13127 1097 aa20.39■□□□□ 0.86
USB1-201ENST00000219281 FMNL2Q96PY5 1086 aa20.39■□□□□ 0.86
USB1-201ENST00000219281 U3KPZ7 1027 aaPredicted RBP20.39■□□□□ 0.86
USB1-201ENST00000219281 ZNF609O15014 1411 aa20.39■□□□□ 0.86
USB1-201ENST00000219281 CYP21A2P08686 494 aa20.39■□□□□ 0.85
USB1-201ENST00000219281 RBM43Q6ZSC3 357 aaKnown RBP20.39■□□□□ 0.85
USB1-201ENST00000219281 ZNF710Q8N1W2 664 aa20.39■□□□□ 0.85
USB1-201ENST00000219281 LRRC2Q9BYS8 371 aa20.39■□□□□ 0.85
USB1-201ENST00000219281 H3BQV1 296 aa20.38■□□□□ 0.85
USB1-201ENST00000219281 MCMDC2Q4G0Z9 681 aa20.38■□□□□ 0.85
USB1-201ENST00000219281 IFFO2Q5TF58 517 aa20.38■□□□□ 0.85
USB1-201ENST00000219281 CCDC9Q9Y3X0 531 aaKnown RBP20.38■□□□□ 0.85
USB1-201ENST00000219281 ATP5J2-PTCD1G3V325 749 aa20.38■□□□□ 0.85
USB1-201ENST00000219281 PTCD1O75127 700 aaKnown RBP20.38■□□□□ 0.85
USB1-201ENST00000219281 DDX46Q7L014 1031 aaKnown RBP20.38■□□□□ 0.85
USB1-201ENST00000219281 KIF3AQ9Y496 699 aa20.38■□□□□ 0.85
USB1-201ENST00000219281 DRC7Q8IY82 874 aa20.37■□□□□ 0.85
USB1-201ENST00000219281 HAUS7Q99871 368 aa20.37■□□□□ 0.85
USB1-201ENST00000219281 CARD10Q9BWT7 1032 aa20.37■□□□□ 0.85
USB1-201ENST00000219281 SCRN1Q12765 414 aa20.37■□□□□ 0.85
USB1-201ENST00000219281 CCDC186Q7Z3E2 898 aa20.37■□□□□ 0.85
USB1-201ENST00000219281 FGD1P98174 961 aa20.36■□□□□ 0.85
USB1-201ENST00000219281 RABL6Q3YEC7 729 aaPredicted RBP20.36■□□□□ 0.85
USB1-201ENST00000219281 TRIM5Q9C035 493 aa20.36■□□□□ 0.85
USB1-201ENST00000219281 PCDH11XQ9BZA7 1347 aa20.36■□□□□ 0.85
USB1-201ENST00000219281 PCDH11YQ9BZA8 1340 aa20.36■□□□□ 0.85
USB1-201ENST00000219281 A0A087WZG4 1122 aa20.36■□□□□ 0.85
USB1-201ENST00000219281 DNAJC25Q9H1X3 360 aa20.36■□□□□ 0.85
USB1-201ENST00000219281 STRN4Q9NRL3 753 aa20.36■□□□□ 0.85
USB1-201ENST00000219281 NRBP1Q9UHY1 535 aa20.36■□□□□ 0.85
USB1-201ENST00000219281 IL2RBP14784 551 aa20.35■□□□□ 0.85
USB1-201ENST00000219281 ZNF165P49910 485 aa20.35■□□□□ 0.85
USB1-201ENST00000219281 ZNF75DP51815 510 aa20.35■□□□□ 0.85
USB1-201ENST00000219281 CEBPZQ03701 1054 aaKnown RBP20.35■□□□□ 0.85
USB1-201ENST00000219281 STOX1Q6ZVD7 989 aa20.35■□□□□ 0.85
USB1-201ENST00000219281 ZSCAN16Q9H4T2 348 aaPredicted RBP20.35■□□□□ 0.85
USB1-201ENST00000219281 RFX7Q2KHR2 1363 aa20.35■□□□□ 0.85
USB1-201ENST00000219281 FOSBP53539 338 aa20.34■□□□□ 0.85
USB1-201ENST00000219281 CHAF1AQ13111 956 aaPredicted RBP20.34■□□□□ 0.85
USB1-201ENST00000219281 NKX1-1Q15270 411 aaPredicted RBP20.34■□□□□ 0.85
USB1-201ENST00000219281 TDRD7Q8NHU6 1098 aaKnown RBP20.34■□□□□ 0.85
USB1-201ENST00000219281 PLA2G4DQ86XP0 818 aa20.34■□□□□ 0.85
USB1-201ENST00000219281 PKNOX2Q96KN3 472 aa20.34■□□□□ 0.85
USB1-201ENST00000219281 CCDC94Q9BW85 323 aaPredicted RBP20.34■□□□□ 0.85
USB1-201ENST00000219281 CFAP45Q9UL16 551 aa20.34■□□□□ 0.85
USB1-201ENST00000219281 RIOK3O14730 519 aaKnown RBP20.33■□□□□ 0.85
USB1-201ENST00000219281 LRMPQ12912 555 aa20.33■□□□□ 0.85
USB1-201ENST00000219281 SLFNL1Q499Z3 407 aa20.33■□□□□ 0.85
USB1-201ENST00000219281 BCL2L12Q9HB09 334 aa20.33■□□□□ 0.85
USB1-201ENST00000219281 ERVV-2B6SEH9 535 aa20.33■□□□□ 0.84
USB1-201ENST00000219281 KBTBD3Q8NAB2 608 aa20.33■□□□□ 0.84
USB1-201ENST00000219281 SMARCC2Q8TAQ2 1214 aa20.33■□□□□ 0.84
USB1-201ENST00000219281 GLI3P10071 1580 aa20.33■□□□□ 0.84
USB1-201ENST00000219281 NBPF26B4DH59 902 aa20.32■□□□□ 0.84
USB1-201ENST00000219281 PFKFB2O60825 505 aa20.32■□□□□ 0.84
USB1-201ENST00000219281 NBPF14Q5TI25 921 aa20.32■□□□□ 0.84
USB1-201ENST00000219281 NBPF10Q6P3W6 841 aaKnown RBP20.32■□□□□ 0.84
USB1-201ENST00000219281 LMBR1LQ6UX01 489 aa20.32■□□□□ 0.84
USB1-201ENST00000219281 NBPF15Q8N660 670 aa20.32■□□□□ 0.84
USB1-201ENST00000219281 EVA1CP58658 441 aa20.32■□□□□ 0.84
USB1-201ENST00000219281 NEUROD6Q96NK8 337 aa20.32■□□□□ 0.84
USB1-201ENST00000219281 CASP7P55210 303 aa20.31■□□□□ 0.84
USB1-201ENST00000219281 APOBRQ0VD83 1088 aa20.31■□□□□ 0.84
USB1-201ENST00000219281 DHX32Q7L7V1 743 aaKnown RBP20.31■□□□□ 0.84
USB1-201ENST00000219281 NSUN7Q8NE18 718 aaKnown RBP20.31■□□□□ 0.84
USB1-201ENST00000219281 LLPHQ9BRT6 129 aaKnown RBP20.31■□□□□ 0.84
USB1-201ENST00000219281 GOLIM4O00461 696 aa20.3■□□□□ 0.84
USB1-201ENST00000219281 ADD1P35611 737 aaKnown RBP20.3■□□□□ 0.84
USB1-201ENST00000219281 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.3■□□□□ 0.84
USB1-201ENST00000219281 FTOQ9C0B1 505 aaKnown RBP eCLIP20.3■□□□□ 0.84
USB1-201ENST00000219281 SH3TC1Q8TE82 1336 aa20.3■□□□□ 0.84
USB1-201ENST00000219281 ABCA3Q99758 1704 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms