RNA–Protein interactions for RNA: ENST00000216297.6

SUPT16H-201, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT16H, Length 4,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-201ENST00000216297 PTCH1Q13635 1447 aa10.08□□□□□ -0.8
SUPT16H-201ENST00000216297 SSH2Q76I76 1423 aa10.08□□□□□ -0.8
SUPT16H-201ENST00000216297 SARNPP82979 210 aaKnown RBP10.07□□□□□ -0.8
SUPT16H-201ENST00000216297 OTUD6BQ8N6M0 293 aa10.07□□□□□ -0.8
SUPT16H-201ENST00000216297 MRPS27Q92552 414 aaKnown RBP10.07□□□□□ -0.8
SUPT16H-201ENST00000216297 TTC14Q96N46 770 aa10.07□□□□□ -0.8
SUPT16H-201ENST00000216297 DESI2Q9BSY9 194 aa10.07□□□□□ -0.8
SUPT16H-201ENST00000216297 FTOQ9C0B1 505 aaKnown RBP eCLIP10.07□□□□□ -0.82e-7■□□□□ 8.6
SUPT16H-201ENST00000216297 FAM53CQ9NYF3 392 aa10.07□□□□□ -0.8
SUPT16H-201ENST00000216297 CAPN7Q9Y6W3 813 aa10.07□□□□□ -0.8
SUPT16H-201ENST00000216297 N4BP1O75113 896 aaKnown RBP10.07□□□□□ -0.8
SUPT16H-201ENST00000216297 HSP90AB4PQ58FF6 505 aa10.07□□□□□ -0.8
SUPT16H-201ENST00000216297 CREB3L3Q68CJ9 461 aa10.07□□□□□ -0.8
SUPT16H-201ENST00000216297 PPP1R42Q7Z4L9 355 aa10.07□□□□□ -0.8
SUPT16H-201ENST00000216297 PPFIBP1Q86W92 1011 aa10.07□□□□□ -0.8
SUPT16H-201ENST00000216297 CEP112Q8N8E3 955 aa10.07□□□□□ -0.8
SUPT16H-201ENST00000216297 DHX58Q96C10 678 aa10.07□□□□□ -0.8
SUPT16H-201ENST00000216297 COG3Q96JB2 828 aa10.07□□□□□ -0.8
SUPT16H-201ENST00000216297 ADCY10Q96PN6 1610 aa10.07□□□□□ -0.8
SUPT16H-201ENST00000216297 CCDC196A0A1B0GTZ2 297 aa10.07□□□□□ -0.8
SUPT16H-201ENST00000216297 PES1O00541 588 aaKnown RBP10.07□□□□□ -0.8
SUPT16H-201ENST00000216297 CORO7P57737 925 aa10.07□□□□□ -0.8
SUPT16H-201ENST00000216297 CCDC70Q6NSX1 233 aa10.07□□□□□ -0.8
SUPT16H-201ENST00000216297 TICAM2Q86XR7 235 aa10.07□□□□□ -0.8
SUPT16H-201ENST00000216297 LSG1Q9H089 658 aaKnown RBP10.07□□□□□ -0.8
SUPT16H-201ENST00000216297 ABCC10Q5T3U5 1492 aa10.07□□□□□ -0.8
SUPT16H-201ENST00000216297 POLR3DP05423 398 aaPredicted RBP10.07□□□□□ -0.8
SUPT16H-201ENST00000216297 PSEN1P49768 467 aa10.07□□□□□ -0.8
SUPT16H-201ENST00000216297 ZNF569Q5MCW4 686 aa10.07□□□□□ -0.8
SUPT16H-201ENST00000216297 HOOK1Q9UJC3 728 aaKnown RBP10.07□□□□□ -0.8
SUPT16H-201ENST00000216297 PPFIA4O75335 1185 aa10.06□□□□□ -0.8
SUPT16H-201ENST00000216297 FBXW10Q5XX13 1052 aa10.06□□□□□ -0.8
SUPT16H-201ENST00000216297 STK11IPQ8N1F8 1099 aa10.06□□□□□ -0.8
SUPT16H-201ENST00000216297 FUT8Q9BYC5 575 aa10.06□□□□□ -0.8
SUPT16H-201ENST00000216297 SLC24A3Q9HC58 644 aa10.06□□□□□ -0.8
SUPT16H-201ENST00000216297 PSD3Q9NYI0 1048 aa10.06□□□□□ -0.8
SUPT16H-201ENST00000216297 PLEKHG2Q9H7P9 1386 aa10.06□□□□□ -0.8
SUPT16H-201ENST00000216297 ZNF853P0CG23 659 aa10.06□□□□□ -0.8
SUPT16H-201ENST00000216297 DPCR1Q3MIW9 517 aa10.06□□□□□ -0.8
SUPT16H-201ENST00000216297 REXO1L1PQ8IX06 675 aa10.06□□□□□ -0.8
SUPT16H-201ENST00000216297 ABCB6Q9NP58 842 aa10.06□□□□□ -0.8
SUPT16H-201ENST00000216297 ARHGAP6O43182 974 aa10.06□□□□□ -0.8
SUPT16H-201ENST00000216297 DONSONQ9NYP3 566 aa10.06□□□□□ -0.8
SUPT16H-201ENST00000216297 BCCIPQ9P287 314 aaKnown RBP eCLIP10.06□□□□□ -0.8
SUPT16H-201ENST00000216297 FRMD3A2A2Y4 597 aa10.06□□□□□ -0.8
SUPT16H-201ENST00000216297 MAP9Q49MG5 647 aa10.06□□□□□ -0.8
SUPT16H-201ENST00000216297 AACSQ86V21 672 aa10.06□□□□□ -0.8
SUPT16H-201ENST00000216297 CCDC148Q8NFR7 591 aa10.06□□□□□ -0.8
SUPT16H-201ENST00000216297 FAM71BQ8TC56 605 aa10.06□□□□□ -0.8
SUPT16H-201ENST00000216297 OSBPL5Q9H0X9 879 aaPredicted RBP10.06□□□□□ -0.8
SUPT16H-201ENST00000216297 EPB41L2O43491 1005 aaKnown RBP10.05□□□□□ -0.8
SUPT16H-201ENST00000216297 KIF1CO43896 1103 aaKnown RBP10.05□□□□□ -0.8
SUPT16H-201ENST00000216297 SSBP05455 408 aaKnown RBP eCLIP10.05□□□□□ -0.8
SUPT16H-201ENST00000216297 SUGCTQ9HAC7 445 aa10.05□□□□□ -0.8
SUPT16H-201ENST00000216297 URB2Q14146 1524 aaKnown RBP10.05□□□□□ -0.8
SUPT16H-201ENST00000216297 CPLX1O14810 134 aa10.05□□□□□ -0.8
SUPT16H-201ENST00000216297 ECM2O94769 699 aaPredicted RBP10.05□□□□□ -0.8
SUPT16H-201ENST00000216297 MTX1Q13505 466 aa10.05□□□□□ -0.8
SUPT16H-201ENST00000216297 DHX40Q8IX18 779 aaKnown RBP10.05□□□□□ -0.8
SUPT16H-201ENST00000216297 FAM76AQ8TAV0 307 aa10.05□□□□□ -0.8
SUPT16H-201ENST00000216297 PRAM1Q96QH2 718 aa10.05□□□□□ -0.8
SUPT16H-201ENST00000216297 C9orf78Q9NZ63 289 aaPredicted RBP10.05□□□□□ -0.8
SUPT16H-201ENST00000216297 RNF40O75150 1001 aa10.05□□□□□ -0.8
SUPT16H-201ENST00000216297 CCDC175P0C221 793 aa10.05□□□□□ -0.8
SUPT16H-201ENST00000216297 MMP14P50281 582 aa10.05□□□□□ -0.8
SUPT16H-201ENST00000216297 ADKP55263 362 aaKnown RBP10.05□□□□□ -0.8
SUPT16H-201ENST00000216297 ATP2B2Q01814 1243 aa10.05□□□□□ -0.8
SUPT16H-201ENST00000216297 SATB1Q01826 763 aa10.05□□□□□ -0.8
SUPT16H-201ENST00000216297 FLIIQ13045 1269 aa10.05□□□□□ -0.8
SUPT16H-201ENST00000216297 BCAS4Q8TDM0 211 aa10.05□□□□□ -0.8
SUPT16H-201ENST00000216297 NFATC2IPQ8NCF5 419 aa10.04□□□□□ -0.8
SUPT16H-201ENST00000216297 WDR24Q96S15 920 aa10.04□□□□□ -0.8
SUPT16H-201ENST00000216297 ZSWIM6Q9HCJ5 1215 aa10.04□□□□□ -0.8
SUPT16H-201ENST00000216297 CASP8Q14790 479 aa10.04□□□□□ -0.8
SUPT16H-201ENST00000216297 NAA25Q14CX7 972 aa10.04□□□□□ -0.8
SUPT16H-201ENST00000216297 POTEDQ86YR6 584 aa10.04□□□□□ -0.8
SUPT16H-201ENST00000216297 BOLA2Q9H3K6 86 aa10.04□□□□□ -0.8
SUPT16H-201ENST00000216297 MED14O60244 1454 aa10.04□□□□□ -0.8
SUPT16H-201ENST00000216297 A0A1W2PP64 1363 aa10.04□□□□□ -0.8
SUPT16H-201ENST00000216297 KIF24Q5T7B8 1368 aa10.04□□□□□ -0.8
SUPT16H-201ENST00000216297 CTAGE9A4FU28 777 aa10.04□□□□□ -0.8
SUPT16H-201ENST00000216297 ZEB2O60315 1214 aa10.04□□□□□ -0.8
SUPT16H-201ENST00000216297 ATP1A3P13637 1013 aa10.04□□□□□ -0.8
SUPT16H-201ENST00000216297 TEFQ10587 303 aa10.04□□□□□ -0.8
SUPT16H-201ENST00000216297 TTC19Q6DKK2 380 aaPredicted RBP10.04□□□□□ -0.8
SUPT16H-201ENST00000216297 USP28Q96RU2 1077 aa10.04□□□□□ -0.8
SUPT16H-201ENST00000216297 SAMM50Q9Y512 469 aa10.04□□□□□ -0.8
SUPT16H-201ENST00000216297 PARP3Q9Y6F1 533 aa10.04□□□□□ -0.8
SUPT16H-201ENST00000216297 GBP2P32456 591 aaPredicted RBP10.04□□□□□ -0.8
SUPT16H-201ENST00000216297 BIRC2Q13490 618 aa10.04□□□□□ -0.8
SUPT16H-201ENST00000216297 CCDC93Q567U6 631 aa10.04□□□□□ -0.8
SUPT16H-201ENST00000216297 CEP89Q96ST8 783 aa10.04□□□□□ -0.8
SUPT16H-201ENST00000216297 PIK3R4Q99570 1358 aa10.03□□□□□ -0.8
SUPT16H-201ENST00000216297 HIP1O00291 1037 aa10.03□□□□□ -0.8
SUPT16H-201ENST00000216297 N4BP2L2Q92802 583 aaPredicted RBP10.03□□□□□ -0.8
SUPT16H-201ENST00000216297 SCLT1Q96NL6 688 aa10.03□□□□□ -0.8
SUPT16H-201ENST00000216297 VEZTQ9HBM0 779 aa10.03□□□□□ -0.8
SUPT16H-201ENST00000216297 SYNJ2O15056 1496 aa10.03□□□□□ -0.8
SUPT16H-201ENST00000216297 ADGRL1O94910 1474 aa10.03□□□□□ -0.8
SUPT16H-201ENST00000216297 NDUFAB1O14561 156 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms