RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 IFIT1P09914 478 aaKnown RBP17.77■□□□□ 0.44
EFNB1-201ENST00000204961 ADORA1P30542 326 aa17.77■□□□□ 0.44
EFNB1-201ENST00000204961 INCENPQ9NQS7 918 aa17.77■□□□□ 0.44
EFNB1-201ENST00000204961 COL15A1P39059 1388 aa17.77■□□□□ 0.44
EFNB1-201ENST00000204961 NPHP3Q7Z494 1330 aa17.77■□□□□ 0.44
EFNB1-201ENST00000204961 PIK3C2AO00443 1686 aa17.77■□□□□ 0.44
EFNB1-201ENST00000204961 CCAR1Q8IX12 1150 aaKnown RBP17.77■□□□□ 0.44
EFNB1-201ENST00000204961 RIOK3O14730 519 aaKnown RBP17.77■□□□□ 0.43
EFNB1-201ENST00000204961 SNRPA1P09661 255 aaKnown RBP17.77■□□□□ 0.43
EFNB1-201ENST00000204961 PHKG2P15735 406 aa17.76■□□□□ 0.43
EFNB1-201ENST00000204961 HS1BP3Q53T59 392 aa17.76■□□□□ 0.43
EFNB1-201ENST00000204961 PTPDC1A2A3K4 754 aa17.76■□□□□ 0.43
EFNB1-201ENST00000204961 PIBF1Q8WXW3 757 aa17.76■□□□□ 0.43
EFNB1-201ENST00000204961 TMX1Q9H3N1 280 aa17.76■□□□□ 0.43
EFNB1-201ENST00000204961 SRCAPQ6ZRS2 3230 aa17.76■□□□□ 0.43
EFNB1-201ENST00000204961 PDCP20941 246 aa17.75■□□□□ 0.43
EFNB1-201ENST00000204961 MARCKSP29966 332 aaPredicted RBP17.75■□□□□ 0.43
EFNB1-201ENST00000204961 TPD52L1Q16890 204 aaPredicted RBP17.75■□□□□ 0.43
EFNB1-201ENST00000204961 MCMDC2Q4G0Z9 681 aa17.75■□□□□ 0.43
EFNB1-201ENST00000204961 C11orf57Q6ZUT1 292 aaPredicted RBP17.75■□□□□ 0.43
EFNB1-201ENST00000204961 IFNL2Q8IZJ0 200 aa17.75■□□□□ 0.43
EFNB1-201ENST00000204961 USP28Q96RU2 1077 aa17.75■□□□□ 0.43
EFNB1-201ENST00000204961 UBR1Q8IWV7 1749 aa17.75■□□□□ 0.43
EFNB1-201ENST00000204961 CHAF1AQ13111 956 aaPredicted RBP17.75■□□□□ 0.43
EFNB1-201ENST00000204961 PPP4R3BQ5MIZ7 849 aa17.75■□□□□ 0.43
EFNB1-201ENST00000204961 AIFM3Q96NN9 605 aa17.75■□□□□ 0.43
EFNB1-201ENST00000204961 CLIP2Q9UDT6 1046 aa17.75■□□□□ 0.43
EFNB1-201ENST00000204961 FAM200AQ8TCP9 573 aa17.75■□□□□ 0.43
EFNB1-201ENST00000204961 ERBB3P21860 1342 aa17.74■□□□□ 0.43
EFNB1-201ENST00000204961 MYL10Q9BUA6 226 aa17.74■□□□□ 0.43
EFNB1-201ENST00000204961 PAG1Q9NWQ8 432 aa17.74■□□□□ 0.43
EFNB1-201ENST00000204961 ZRSR1Q15695 479 aaKnown RBP17.74■□□□□ 0.43
EFNB1-201ENST00000204961 FSIP1Q8NA03 581 aa17.74■□□□□ 0.43
EFNB1-201ENST00000204961 PRDM11Q9NQV5 511 aa17.74■□□□□ 0.43
EFNB1-201ENST00000204961 IQSEC3Q9UPP2 1182 aaPredicted RBP17.74■□□□□ 0.43
EFNB1-201ENST00000204961 PRDM4Q9UKN5 801 aa17.74■□□□□ 0.43
EFNB1-201ENST00000204961 HIP1O00291 1037 aa17.73■□□□□ 0.43
EFNB1-201ENST00000204961 KIF3AQ9Y496 699 aa17.73■□□□□ 0.43
EFNB1-201ENST00000204961 A0A1B0GUL7 405 aa17.73■□□□□ 0.43
EFNB1-201ENST00000204961 NBPF26B4DH59 902 aa17.73■□□□□ 0.43
EFNB1-201ENST00000204961 MTX1Q13505 466 aa17.73■□□□□ 0.43
EFNB1-201ENST00000204961 CCDC144BQ3MJ40 725 aa17.73■□□□□ 0.43
EFNB1-201ENST00000204961 NBPF14Q5TI25 921 aa17.73■□□□□ 0.43
EFNB1-201ENST00000204961 NBPF10Q6P3W6 841 aaKnown RBP17.73■□□□□ 0.43
EFNB1-201ENST00000204961 NBPF15Q8N660 670 aa17.73■□□□□ 0.43
EFNB1-201ENST00000204961 HDAC5Q9UQL6 1122 aa17.73■□□□□ 0.43
EFNB1-201ENST00000204961 IDH1O75874 414 aaKnown RBP17.72■□□□□ 0.43
EFNB1-201ENST00000204961 HOXB7P09629 217 aa17.72■□□□□ 0.43
EFNB1-201ENST00000204961 U2AF2P26368 475 aaKnown RBP eCLIP17.72■□□□□ 0.43
EFNB1-201ENST00000204961 RRP12Q5JTH9 1297 aaKnown RBP17.72■□□□□ 0.43
EFNB1-201ENST00000204961 FAM177A1Q8N128 213 aaPredicted RBP17.72■□□□□ 0.43
EFNB1-201ENST00000204961 SCAND2PQ9GZW5 306 aaPredicted RBP17.72■□□□□ 0.43
EFNB1-201ENST00000204961 RGPD2P0DJD1 1756 aa17.72■□□□□ 0.43
EFNB1-201ENST00000204961 CPLX1O14810 134 aa17.72■□□□□ 0.43
EFNB1-201ENST00000204961 LETM1O95202 739 aaPredicted RBP17.72■□□□□ 0.43
EFNB1-201ENST00000204961 SCARF1Q14162 830 aa17.72■□□□□ 0.43
EFNB1-201ENST00000204961 SPECC1Q5M775 1068 aa17.72■□□□□ 0.43
EFNB1-201ENST00000204961 CCDC73Q6ZRK6 1079 aa17.72■□□□□ 0.43
EFNB1-201ENST00000204961 GTF3C6Q969F1 213 aa17.72■□□□□ 0.43
EFNB1-201ENST00000204961 UBE2Q2LH0YL09 131 aa17.72■□□□□ 0.43
EFNB1-201ENST00000204961 BCL2L12Q9HB09 334 aa17.72■□□□□ 0.43
EFNB1-201ENST00000204961 BABAM1Q9NWV8 329 aa17.72■□□□□ 0.43
EFNB1-201ENST00000204961 GOLGA6L6A8MZA4 724 aa17.71■□□□□ 0.43
EFNB1-201ENST00000204961 GNL2Q13823 731 aaKnown RBP17.71■□□□□ 0.43
EFNB1-201ENST00000204961 ANKRD1Q15327 319 aa17.71■□□□□ 0.43
EFNB1-201ENST00000204961 MAP7D2Q96T17 732 aa17.71■□□□□ 0.43
EFNB1-201ENST00000204961 GOLPH3LQ9H4A5 285 aa17.71■□□□□ 0.43
EFNB1-201ENST00000204961 DYNC1I1O14576 645 aa17.71■□□□□ 0.43
EFNB1-201ENST00000204961 TTC39AQ5SRH9 613 aa17.71■□□□□ 0.43
EFNB1-201ENST00000204961 TM6SF1Q9BZW5 370 aa17.71■□□□□ 0.43
EFNB1-201ENST00000204961 ZNF609O15014 1411 aa17.71■□□□□ 0.43
EFNB1-201ENST00000204961 USP27XA6NNY8 438 aa17.7■□□□□ 0.42
EFNB1-201ENST00000204961 KINO60870 393 aaKnown RBP17.7■□□□□ 0.42
EFNB1-201ENST00000204961 GOLGA8FQ08AF8 430 aa17.7■□□□□ 0.42
EFNB1-201ENST00000204961 GOLGA8DPQ0D2H9 430 aa17.7■□□□□ 0.42
EFNB1-201ENST00000204961 CMTR1Q8N1G2 835 aaKnown RBP17.7■□□□□ 0.42
EFNB1-201ENST00000204961 AOPEPQ8N6M6 819 aa17.7■□□□□ 0.42
EFNB1-201ENST00000204961 CACTINQ8WUQ7 758 aaKnown RBP17.7■□□□□ 0.42
EFNB1-201ENST00000204961 FUCA2Q9BTY2 467 aa17.7■□□□□ 0.42
EFNB1-201ENST00000204961 M0R2C6 588 aa17.7■□□□□ 0.42
EFNB1-201ENST00000204961 SMC2O95347 1197 aa17.7■□□□□ 0.42
EFNB1-201ENST00000204961 CHMP4AQ9BY43 222 aa17.7■□□□□ 0.42
EFNB1-201ENST00000204961 NWD1Q149M9 1564 aa17.7■□□□□ 0.42
EFNB1-201ENST00000204961 TNNT1P13805 278 aa17.7■□□□□ 0.42
EFNB1-201ENST00000204961 EVA1CP58658 441 aa17.7■□□□□ 0.42
EFNB1-201ENST00000204961 UVSSAQ2YD98 709 aa17.7■□□□□ 0.42
EFNB1-201ENST00000204961 CEP126Q9P2H0 1117 aa17.7■□□□□ 0.42
EFNB1-201ENST00000204961 E7EWF7 191 aa17.69■□□□□ 0.42
EFNB1-201ENST00000204961 HSPD1P10809 573 aaKnown RBP17.69■□□□□ 0.42
EFNB1-201ENST00000204961 STK38Q15208 465 aa17.69■□□□□ 0.42
EFNB1-201ENST00000204961 ZNF710Q8N1W2 664 aa17.69■□□□□ 0.42
EFNB1-201ENST00000204961 OSBP2Q969R2 916 aa17.69■□□□□ 0.42
EFNB1-201ENST00000204961 ATP5JP18859 108 aa17.69■□□□□ 0.42
EFNB1-201ENST00000204961 CCDC57Q2TAC2 916 aa17.69■□□□□ 0.42
EFNB1-201ENST00000204961 SLC4A8Q2Y0W8 1093 aa17.69■□□□□ 0.42
EFNB1-201ENST00000204961 TMEM87AQ8NBN3 555 aa17.69■□□□□ 0.42
EFNB1-201ENST00000204961 KLF18A0A0U1RQI7 1052 aa17.69■□□□□ 0.42
EFNB1-201ENST00000204961 KIAA1524Q8TCG1 905 aa17.69■□□□□ 0.42
EFNB1-201ENST00000204961 GOLGA8BA8MQT2 603 aa17.68■□□□□ 0.42
EFNB1-201ENST00000204961 MCM5P33992 734 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms