RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 ARHGEF25Q86VW2 580 aa23.89■■□□□ 1.42
RCN1-201ENST00000054950 FBXW7Q969H0 707 aa23.89■■□□□ 1.42
RCN1-201ENST00000054950 TNNT1P13805 278 aa23.89■■□□□ 1.41
RCN1-201ENST00000054950 ORAI2Q96SN7 254 aa23.89■■□□□ 1.41
RCN1-201ENST00000054950 GOLPH3LQ9H4A5 285 aa23.89■■□□□ 1.41
RCN1-201ENST00000054950 FGD1P98174 961 aa23.88■■□□□ 1.41
RCN1-201ENST00000054950 PTPN12Q05209 780 aaKnown RBP23.88■■□□□ 1.41
RCN1-201ENST00000054950 NCBP1Q09161 790 aaKnown RBP23.88■■□□□ 1.41
RCN1-201ENST00000054950 NEXNQ0ZGT2 675 aa23.88■■□□□ 1.41
RCN1-201ENST00000054950 C5P01031 1676 aa23.88■■□□□ 1.41
RCN1-201ENST00000054950 USP16Q9Y5T5 823 aa23.88■■□□□ 1.41
RCN1-201ENST00000054950 NCAPD2Q15021 1401 aa23.87■■□□□ 1.41
RCN1-201ENST00000054950 CCT2P78371 535 aaKnown RBP23.87■■□□□ 1.41
RCN1-201ENST00000054950 GUCY1B3Q02153 619 aa23.87■■□□□ 1.41
RCN1-201ENST00000054950 ZNF790Q6PG37 636 aa23.87■■□□□ 1.41
RCN1-201ENST00000054950 UBE3BQ7Z3V4 1068 aa23.87■■□□□ 1.41
RCN1-201ENST00000054950 ATP5J2-PTCD1G3V325 749 aa23.87■■□□□ 1.41
RCN1-201ENST00000054950 PTCD1O75127 700 aaKnown RBP23.87■■□□□ 1.41
RCN1-201ENST00000054950 PDIA4P13667 645 aaKnown RBP23.87■■□□□ 1.41
RCN1-201ENST00000054950 ATP5JP18859 108 aa23.87■■□□□ 1.41
RCN1-201ENST00000054950 RFX5P48382 616 aaPredicted RBP23.87■■□□□ 1.41
RCN1-201ENST00000054950 USP27XA6NNY8 438 aa23.86■■□□□ 1.41
RCN1-201ENST00000054950 ADD1P35611 737 aaKnown RBP23.86■■□□□ 1.41
RCN1-201ENST00000054950 DMTNQ08495 405 aa23.86■■□□□ 1.41
RCN1-201ENST00000054950 APOBRQ0VD83 1088 aa23.86■■□□□ 1.41
RCN1-201ENST00000054950 NCOA5Q9HCD5 579 aaKnown RBP23.86■■□□□ 1.41
RCN1-201ENST00000054950 NAP1L2Q9ULW6 460 aaPredicted RBP23.86■■□□□ 1.41
RCN1-201ENST00000054950 SIPA1L3O60292 1781 aaPredicted RBP23.86■■□□□ 1.41
RCN1-201ENST00000054950 KRT32Q14532 448 aa23.86■■□□□ 1.41
RCN1-201ENST00000054950 IQCB1Q15051 598 aa23.86■■□□□ 1.41
RCN1-201ENST00000054950 ZNF592Q92610 1267 aa23.86■■□□□ 1.41
RCN1-201ENST00000054950 CTDNEP1O95476 244 aa23.85■■□□□ 1.41
RCN1-201ENST00000054950 TPD52L1Q16890 204 aaPredicted RBP23.85■■□□□ 1.41
RCN1-201ENST00000054950 CCAR1Q8IX12 1150 aaKnown RBP23.85■■□□□ 1.41
RCN1-201ENST00000054950 NFATC2IPQ8NCF5 419 aa23.85■■□□□ 1.41
RCN1-201ENST00000054950 METTL22Q9BUU2 404 aaPredicted RBP23.85■■□□□ 1.41
RCN1-201ENST00000054950 MRC1P22897 1456 aa23.85■■□□□ 1.41
RCN1-201ENST00000054950 CHST3Q7LGC8 479 aa23.85■■□□□ 1.41
RCN1-201ENST00000054950 IGSF3O75054 1194 aa23.84■■□□□ 1.41
RCN1-201ENST00000054950 NSUN7Q8NE18 718 aaKnown RBP23.84■■□□□ 1.41
RCN1-201ENST00000054950 USP28Q96RU2 1077 aa23.84■■□□□ 1.41
RCN1-201ENST00000054950 COPRSQ9NQ92 184 aa23.84■■□□□ 1.41
RCN1-201ENST00000054950 MCMDC2Q4G0Z9 681 aa23.83■■□□□ 1.41
RCN1-201ENST00000054950 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.83■■□□□ 1.41
RCN1-201ENST00000054950 ZNF496Q96IT1 587 aaPredicted RBP23.83■■□□□ 1.41
RCN1-201ENST00000054950 GOLGA6L19H0YKK7 550 aa23.83■■□□□ 1.4
RCN1-201ENST00000054950 U3KPZ7 1027 aaPredicted RBP23.83■■□□□ 1.4
RCN1-201ENST00000054950 LAMA4Q16363 1823 aa23.82■■□□□ 1.4
RCN1-201ENST00000054950 PTPDC1A2A3K4 754 aa23.82■■□□□ 1.4
RCN1-201ENST00000054950 CFAP45Q9UL16 551 aa23.82■■□□□ 1.4
RCN1-201ENST00000054950 SMARCC2Q8TAQ2 1214 aa23.82■■□□□ 1.4
RCN1-201ENST00000054950 SMTNL1A8MU46 457 aa23.81■■□□□ 1.4
RCN1-201ENST00000054950 ANKRD13DQ6ZTN6 518 aa23.81■■□□□ 1.4
RCN1-201ENST00000054950 ZSCAN16Q9H4T2 348 aaPredicted RBP23.81■■□□□ 1.4
RCN1-201ENST00000054950 FER1L4A9Z1Z3 1794 aa23.81■■□□□ 1.4
RCN1-201ENST00000054950 RGPD5Q99666 1765 aa23.81■■□□□ 1.4
RCN1-201ENST00000054950 ZC3H6P61129 1189 aaKnown RBP23.81■■□□□ 1.4
RCN1-201ENST00000054950 FILIP1Q7Z7B0 1213 aa23.81■■□□□ 1.4
RCN1-201ENST00000054950 LRRC8AQ8IWT6 810 aa23.81■■□□□ 1.4
RCN1-201ENST00000054950 OVOS2A0A0G2JMS6 1433 aa23.8■■□□□ 1.4
RCN1-201ENST00000054950 SNW1Q13573 536 aaKnown RBP23.8■■□□□ 1.4
RCN1-201ENST00000054950 GOLIM4O00461 696 aa23.8■■□□□ 1.4
RCN1-201ENST00000054950 HAUS7Q99871 368 aa23.8■■□□□ 1.4
RCN1-201ENST00000054950 PFKFB2O60825 505 aa23.79■■□□□ 1.4
RCN1-201ENST00000054950 SLC52A2Q9HAB3 445 aa23.79■■□□□ 1.4
RCN1-201ENST00000054950 KDM6AO15550 1401 aaPredicted RBP23.79■■□□□ 1.4
RCN1-201ENST00000054950 PHRF1Q9P1Y6 1649 aaKnown RBP23.79■■□□□ 1.4
RCN1-201ENST00000054950 NEUROD6Q96NK8 337 aa23.79■■□□□ 1.4
RCN1-201ENST00000054950 MYH15Q9Y2K3 1946 aa23.78■■□□□ 1.4
RCN1-201ENST00000054950 A0A087WZG4 1122 aa23.78■■□□□ 1.4
RCN1-201ENST00000054950 STX1AQ16623 288 aa23.78■■□□□ 1.4
RCN1-201ENST00000054950 LRP10Q7Z4F1 713 aa23.78■■□□□ 1.4
RCN1-201ENST00000054950 DHX40Q8IX18 779 aaKnown RBP23.78■■□□□ 1.4
RCN1-201ENST00000054950 TRMT1Q9NXH9 659 aaKnown RBP23.78■■□□□ 1.4
RCN1-201ENST00000054950 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.78■■□□□ 1.4
RCN1-201ENST00000054950 V9GYY5 206 aaPredicted RBP23.78■■□□□ 1.4
RCN1-201ENST00000054950 ILDR1Q86SU0 546 aaPredicted RBP23.78■■□□□ 1.4
RCN1-201ENST00000054950 CCDC112Q8NEF3 446 aa23.78■■□□□ 1.4
RCN1-201ENST00000054950 RCOR1Q9UKL0 485 aa23.78■■□□□ 1.4
RCN1-201ENST00000054950 DHX32Q7L7V1 743 aaKnown RBP23.77■■□□□ 1.4
RCN1-201ENST00000054950 AFDNP55196 1824 aaKnown RBP23.77■■□□□ 1.4
RCN1-201ENST00000054950 BECN2A8MW95 431 aa23.77■■□□□ 1.4
RCN1-201ENST00000054950 TIMM10P62072 90 aa23.77■■□□□ 1.4
RCN1-201ENST00000054950 CEP135Q66GS9 1140 aa23.77■■□□□ 1.4
RCN1-201ENST00000054950 OTUD7BQ6GQQ9 843 aa23.77■■□□□ 1.4
RCN1-201ENST00000054950 LMBR1LQ6UX01 489 aa23.77■■□□□ 1.4
RCN1-201ENST00000054950 FSIP1Q8NA03 581 aa23.77■■□□□ 1.4
RCN1-201ENST00000054950 GPHNQ9NQX3 736 aaPredicted RBP23.77■■□□□ 1.4
RCN1-201ENST00000054950 ME1P48163 572 aa23.76■■□□□ 1.39
RCN1-201ENST00000054950 AOPEPQ8N6M6 819 aa23.76■■□□□ 1.39
RCN1-201ENST00000054950 KBTBD3Q8NAB2 608 aa23.76■■□□□ 1.39
RCN1-201ENST00000054950 CDC25BP30305 580 aa23.76■■□□□ 1.39
RCN1-201ENST00000054950 UTP14CQ5TAP6 766 aaKnown RBP23.76■■□□□ 1.39
RCN1-201ENST00000054950 CCDC73Q6ZRK6 1079 aa23.76■■□□□ 1.39
RCN1-201ENST00000054950 SKILP12757 684 aa23.75■■□□□ 1.39
RCN1-201ENST00000054950 TTLL5Q6EMB2 1281 aa23.75■■□□□ 1.39
RCN1-201ENST00000054950 NLRP2Q9NX02 1062 aa23.75■■□□□ 1.39
RCN1-201ENST00000054950 CCDC69A6NI79 296 aa23.75■■□□□ 1.39
RCN1-201ENST00000054950 KINO60870 393 aaKnown RBP23.75■■□□□ 1.39
RCN1-201ENST00000054950 SARM1Q6SZW1 724 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms