RNA–Protein interactions for RNA: ENSMUST00000173243.7

Ccdc28a-203, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 5 BASIC

Gene Ccdc28a, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-203ENSMUST00000173243 Pde8bE9Q4S1 865 aa15.19■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Atg9aQ68FE2 551 aa15.19■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Ccdc93Q7TQK5 629 aa15.19■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Tor1aip2Q8BYU6 502 aa15.19■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Ncoa5Q91W39 579 aaKnown RBP15.19■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Glrx3Q9CQM9 337 aa15.19■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Mrpl12Q9DB15 201 aaKnown RBP15.19■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Sart3Q9JLI8 962 aaKnown RBP15.19■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 NynrinQ5DTZ0 1840 aa15.19■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Znf521Q6KAS7 1311 aa15.18■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 AppP12023 770 aa15.18■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Mex3cQ05A36 652 aaKnown RBP15.18■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Cwc27Q3TKY6 469 aa15.18■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Znf692Q3U381 531 aa15.18■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Jarid2Q62315 1234 aa15.18■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Ppp4r3aQ6P2K6 820 aa15.18■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Trpm7Q923J1 1863 aa15.17■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 PnnO35691 725 aaKnown RBP15.17■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Zkscan8Q8BSL0 588 aa15.17■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Tmc2Q8R4P4 888 aa15.17■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Osbpl5Q9ER64 874 aa15.17■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Sh3bp5Q9Z131 463 aa15.17■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Myh15E9Q264 1925 aa15.17■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Triml2E9PW10 424 aa15.16■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Speer4dL7N216 212 aa15.16■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Nlrp1aQ2LKU9 1182 aa15.16■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Ell2Q3UKU1 639 aa15.16■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Slc4a10Q5DTL9 1118 aa15.16■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Nell2Q61220 819 aa15.16■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Glis3Q6XP49 780 aa15.16■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Ppp1r42Q8R1Z4 357 aa15.16■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Sh3bp5lQ99LH9 392 aa15.16■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Dcdc2bF7BCK0 340 aa15.15■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 AampJ3QN89 436 aa15.15■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Pa2g4P50580 394 aaKnown RBP15.15■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 AaasP58742 546 aa15.15■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Rhbdl3P58873 404 aa15.15■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Csrnp1P59054 583 aa15.15■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Ccdc51Q3URS9 406 aa15.15■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Tom1l2Q5SRX1 507 aa15.15■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Srgap3Q812A2 1099 aa15.15■□□□□ 0.02
Ccdc28a-203ENSMUST00000173243 Usp17lbE9Q9U0 468 aa15.14■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Mmp14P53690 582 aa15.14■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Rps12P63323 132 aaKnown RBP15.14■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Rab3gap1Q80UJ7 981 aa15.14■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Znf428Q8C1M2 176 aa15.14■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 ParvgQ9ERD8 331 aa15.14■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Dpp7Q9ET22 506 aa15.14■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 LratQ9JI60 231 aa15.14■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 UtrnE9Q6R7 3430 aa15.13■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Gm4340L7N2C4 268 aa15.13■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Dhx38Q80X98 1228 aa15.13■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Glis2Q8VDL9 521 aa15.13■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Tnip1Q9WUU8 647 aa15.13■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Abcc4E9Q236 1325 aa15.13■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Myh4Q5SX39 1939 aa15.12■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Casp1P29452 402 aa15.12■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Kiaa0753Q6A000 959 aa15.12■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Gm2163Q6PCY5 473 aa15.12■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Fam102bQ8BQS4 339 aa15.12■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Dis3l2Q8CI75 870 aaKnown RBP15.12■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Slc51aQ8R000 340 aa15.12■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Rrs1Q9CYH6 365 aaKnown RBP15.12■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Tbc1d8Q9Z1A9 1134 aa15.12■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Arfgef1G3X9K3 1846 aaKnown RBP15.12■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Nphp3Q7TNH6 1325 aa15.12■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Slc4a9E9PUP3 929 aa15.11■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Psmd14O35593 310 aa15.11■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Mmp8O70138 465 aa15.11■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Atp2b3Q0VF55 1220 aa15.11■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Gsdma2Q32M21 443 aa15.11■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 EspnlQ3UYR4 1005 aa15.11■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 NfkbibQ60778 359 aa15.11■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Zbtb3Q91X45 518 aa15.11■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Mtmr2Q9Z2D1 643 aa15.11■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 CpdO89001 1377 aa15.11■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Sept1P42209 366 aa15.1■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 NyxP83503 476 aa15.1■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Mctp2Q5RJH2 878 aa15.1■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Ddx31Q6NZQ2 687 aaKnown RBP15.1■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Fam13aQ8BGI4 693 aa15.1■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Ift57Q8BXG3 429 aa15.1■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 HnrnpuQ8VEK3 800 aaKnown RBP15.1■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Kcnq5Q9JK45 933 aa15.1■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Mast3Q3U214 1321 aa15.1■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Tspoap1Q7TNF8 1846 aa15.1■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Terf1P70371 421 aa15.09■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Gm5592Q3V0A6 857 aa15.09■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Fchsd1Q6PFY1 688 aa15.09■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Tspyl2Q7TQI8 677 aa15.09■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Znf18Q810A1 556 aa15.09■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Trmt44Q9D2Q2 713 aa15.09■□□□□ 0.01
Ccdc28a-203ENSMUST00000173243 Mcmdc2E9Q956 681 aa15.08■□□□□ 0
Ccdc28a-203ENSMUST00000173243 PgfP49764 158 aa15.08■□□□□ 0
Ccdc28a-203ENSMUST00000173243 Rbm46P86049 533 aa15.08■□□□□ 0
Ccdc28a-203ENSMUST00000173243 GmpsQ3THK7 693 aa15.08■□□□□ 0
Ccdc28a-203ENSMUST00000173243 Spg7Q3ULF4 781 aa15.08■□□□□ 0
Ccdc28a-203ENSMUST00000173243 Bms1Q6PGF5 1284 aaKnown RBP15.08■□□□□ 0
Ccdc28a-203ENSMUST00000173243 Ufl1Q8CCJ3 793 aaKnown RBP15.08■□□□□ 0
Ccdc28a-203ENSMUST00000173243 Nphp1Q9QY53 687 aa15.08■□□□□ 0
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms