RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Map3k2Q61083 619 aa10.39□□□□□ -0.75
Trim40-203ENSMUST00000172711 Ncbp3Q8BZR9 615 aaKnown RBP10.39□□□□□ -0.75
Trim40-203ENSMUST00000172711 Rgs19Q9CX84 216 aa10.39□□□□□ -0.75
Trim40-203ENSMUST00000172711 Stk25Q9Z2W1 426 aa10.39□□□□□ -0.75
Trim40-203ENSMUST00000172711 Phrf1A6H619 1682 aa10.39□□□□□ -0.75
Trim40-203ENSMUST00000172711 McamQ8R2Y2 648 aaKnown RBP10.38□□□□□ -0.75
Trim40-203ENSMUST00000172711 Cwc25Q9DBF7 416 aa10.38□□□□□ -0.75
Trim40-203ENSMUST00000172711 HunkO88866 714 aa10.38□□□□□ -0.75
Trim40-203ENSMUST00000172711 LeprP48356 1162 aa10.38□□□□□ -0.75
Trim40-203ENSMUST00000172711 NyxP83503 476 aa10.38□□□□□ -0.75
Trim40-203ENSMUST00000172711 Pdzrn3Q69ZS0 1063 aa10.38□□□□□ -0.75
Trim40-203ENSMUST00000172711 Ppil2Q9D787 521 aa10.38□□□□□ -0.75
Trim40-203ENSMUST00000172711 Heg1E9Q7X6 1337 aa10.37□□□□□ -0.75
Trim40-203ENSMUST00000172711 Exoc6bA6H5Z3 810 aa10.37□□□□□ -0.75
Trim40-203ENSMUST00000172711 Rps12P63323 132 aaKnown RBP10.37□□□□□ -0.75
Trim40-203ENSMUST00000172711 Bend4P86174 541 aa10.37□□□□□ -0.75
Trim40-203ENSMUST00000172711 Mansc4Q3UU94 337 aa10.37□□□□□ -0.75
Trim40-203ENSMUST00000172711 Gm2163Q6PCY5 473 aa10.37□□□□□ -0.75
Trim40-203ENSMUST00000172711 Pbx4Q99NE9 378 aa10.37□□□□□ -0.75
Trim40-203ENSMUST00000172711 Rbm33Q9CXK9 1231 aaKnown RBP10.37□□□□□ -0.75
Trim40-203ENSMUST00000172711 Fam213aQ9CYH2 218 aa10.37□□□□□ -0.75
Trim40-203ENSMUST00000172711 Ehd4Q9EQP2 541 aa10.37□□□□□ -0.75
Trim40-203ENSMUST00000172711 Prg3Q9JL95 222 aa10.37□□□□□ -0.75
Trim40-203ENSMUST00000172711 Carmil3Q3UFQ8 1375 aa10.37□□□□□ -0.75
Trim40-203ENSMUST00000172711 Arrdc4A0A0B4J1F4 415 aa10.36□□□□□ -0.75
Trim40-203ENSMUST00000172711 Brpf1B2RRD7 1212 aa10.36□□□□□ -0.75
Trim40-203ENSMUST00000172711 Zscan21Q07231 555 aa10.36□□□□□ -0.75
Trim40-203ENSMUST00000172711 Gas2l2Q5SSG4 860 aa10.36□□□□□ -0.75
Trim40-203ENSMUST00000172711 Ddx58Q6Q899 926 aa10.36□□□□□ -0.75
Trim40-203ENSMUST00000172711 Ripor2Q80U16 1078 aa10.36□□□□□ -0.75
Trim40-203ENSMUST00000172711 Cog5Q8C0L8 829 aa10.36□□□□□ -0.75
Trim40-203ENSMUST00000172711 Slfn1Q9Z0I7 337 aa10.36□□□□□ -0.75
Trim40-203ENSMUST00000172711 Ankrd50F7BE84 1390 aa10.36□□□□□ -0.75
Trim40-203ENSMUST00000172711 Myo3bQ1EG27 1305 aa10.35□□□□□ -0.75
Trim40-203ENSMUST00000172711 Ep400Q8CHI8 3072 aaKnown RBP10.35□□□□□ -0.75
Trim40-203ENSMUST00000172711 Rbm25B2RY56 838 aaKnown RBP10.35□□□□□ -0.75
Trim40-203ENSMUST00000172711 Ell2Q3UKU1 639 aa10.35□□□□□ -0.75
Trim40-203ENSMUST00000172711 Oog3Q3UWY1 500 aa10.35□□□□□ -0.75
Trim40-203ENSMUST00000172711 Ddx46Q569Z5 1032 aaKnown RBP10.35□□□□□ -0.75
Trim40-203ENSMUST00000172711 Abhd15Q5F2F2 459 aa10.35□□□□□ -0.75
Trim40-203ENSMUST00000172711 Neurod2Q62414 383 aa10.35□□□□□ -0.75
Trim40-203ENSMUST00000172711 Agtpbp1Q641K1 1218 aa10.35□□□□□ -0.75
Trim40-203ENSMUST00000172711 Mxd3Q80US8 206 aa10.35□□□□□ -0.75
Trim40-203ENSMUST00000172711 Ttc14Q9CSP9 761 aa10.35□□□□□ -0.75
Trim40-203ENSMUST00000172711 Telo2Q9DC40 840 aaKnown RBP10.35□□□□□ -0.75
Trim40-203ENSMUST00000172711 Mtmr2Q9Z2D1 643 aa10.35□□□□□ -0.75
Trim40-203ENSMUST00000172711 Usp17ldG5E8G2 545 aa10.34□□□□□ -0.75
Trim40-203ENSMUST00000172711 Usp17lcG5E8I7 545 aa10.34□□□□□ -0.75
Trim40-203ENSMUST00000172711 Cap1P40124 474 aa10.34□□□□□ -0.75
Trim40-203ENSMUST00000172711 Traf5P70191 558 aa10.34□□□□□ -0.75
Trim40-203ENSMUST00000172711 IntuQ059U7 942 aa10.34□□□□□ -0.75
Trim40-203ENSMUST00000172711 Znf496Q5SXI5 585 aa10.34□□□□□ -0.75
Trim40-203ENSMUST00000172711 CrbnQ8C7D2 445 aa10.34□□□□□ -0.75
Trim40-203ENSMUST00000172711 Tmem79Q9D709 391 aa10.34□□□□□ -0.75
Trim40-203ENSMUST00000172711 Echdc1Q9D9V3 322 aa10.34□□□□□ -0.75
Trim40-203ENSMUST00000172711 Stard3nlQ9DCI3 235 aa10.34□□□□□ -0.75
Trim40-203ENSMUST00000172711 Sytl4Q9R0Q1 673 aa10.34□□□□□ -0.75
Trim40-203ENSMUST00000172711 Col11a1Q61245 1804 aa10.34□□□□□ -0.75
Trim40-203ENSMUST00000172711 Ttc21aQ8C0S4 1314 aa10.34□□□□□ -0.75
Trim40-203ENSMUST00000172711 VaspP70460 375 aaKnown RBP10.33□□□□□ -0.76
Trim40-203ENSMUST00000172711 Large2Q5XPT3 690 aa10.33□□□□□ -0.76
Trim40-203ENSMUST00000172711 Itga6Q61739 1091 aa10.33□□□□□ -0.76
Trim40-203ENSMUST00000172711 SnphQ80U23 495 aa10.33□□□□□ -0.76
Trim40-203ENSMUST00000172711 Cnksr2Q80YA9 1032 aa10.33□□□□□ -0.76
Trim40-203ENSMUST00000172711 Ndfip2Q91ZP6 311 aa10.33□□□□□ -0.76
Trim40-203ENSMUST00000172711 Lmbr1lQ9D1E5 489 aa10.33□□□□□ -0.76
Trim40-203ENSMUST00000172711 Kank3Q9Z1P7 791 aa10.33□□□□□ -0.76
Trim40-203ENSMUST00000172711 Znfx1Q8R151 1909 aaKnown RBP10.33□□□□□ -0.76
Trim40-203ENSMUST00000172711 Scn10aQ6QIY3 1958 aa10.33□□□□□ -0.76
Trim40-203ENSMUST00000172711 Skint7A7XV04 395 aa10.33□□□□□ -0.76
Trim40-203ENSMUST00000172711 1700029H14RikE9PY36 240 aa10.33□□□□□ -0.76
Trim40-203ENSMUST00000172711 Trim34bJ3QNR8 485 aa10.33□□□□□ -0.76
Trim40-203ENSMUST00000172711 Plcb3P51432 1234 aaKnown RBP10.33□□□□□ -0.76
Trim40-203ENSMUST00000172711 Trappc12Q8K2L8 797 aa10.33□□□□□ -0.76
Trim40-203ENSMUST00000172711 Kcnc4Q8R1C0 628 aa10.33□□□□□ -0.76
Trim40-203ENSMUST00000172711 Slc14a2Q8R4T9 930 aa10.33□□□□□ -0.76
Trim40-203ENSMUST00000172711 Kifc2O08672 792 aa10.32□□□□□ -0.76
Trim40-203ENSMUST00000172711 Rangap1P46061 589 aaKnown RBP10.32□□□□□ -0.76
Trim40-203ENSMUST00000172711 Terf1P70371 421 aa10.32□□□□□ -0.76
Trim40-203ENSMUST00000172711 Map3k13Q1HKZ5 959 aa10.32□□□□□ -0.76
Trim40-203ENSMUST00000172711 Aifm3Q3TY86 605 aa10.32□□□□□ -0.76
Trim40-203ENSMUST00000172711 Znf697Q569E7 569 aa10.32□□□□□ -0.76
Trim40-203ENSMUST00000172711 Pxylp1Q8BHA9 480 aa10.32□□□□□ -0.76
Trim40-203ENSMUST00000172711 Usp17lbE9Q9U0 468 aa10.31□□□□□ -0.76
Trim40-203ENSMUST00000172711 Anxa1P10107 346 aaKnown RBP10.31□□□□□ -0.76
Trim40-203ENSMUST00000172711 Tll1Q62381 1013 aa10.31□□□□□ -0.76
Trim40-203ENSMUST00000172711 Mphosph10Q810V0 681 aaKnown RBP10.31□□□□□ -0.76
Trim40-203ENSMUST00000172711 Nup98Q6PFD9 1816 aaKnown RBP10.3□□□□□ -0.76
Trim40-203ENSMUST00000172711 Ube4aE9Q735 1028 aa10.3□□□□□ -0.76
Trim40-203ENSMUST00000172711 Vamp4O70480 141 aa10.3□□□□□ -0.76
Trim40-203ENSMUST00000172711 Itgb7P26011 806 aa10.3□□□□□ -0.76
Trim40-203ENSMUST00000172711 Chl1P70232 1209 aa10.3□□□□□ -0.76
Trim40-203ENSMUST00000172711 Irf6P97431 467 aa10.3□□□□□ -0.76
Trim40-203ENSMUST00000172711 Ccdc51Q3URS9 406 aa10.3□□□□□ -0.76
Trim40-203ENSMUST00000172711 Foxd1Q61345 456 aa10.3□□□□□ -0.76
Trim40-203ENSMUST00000172711 Lysmd1Q9D0E3 226 aa10.3□□□□□ -0.76
Trim40-203ENSMUST00000172711 Zap70P43404 618 aa10.29□□□□□ -0.76
Trim40-203ENSMUST00000172711 Il15P48346 162 aa10.29□□□□□ -0.76
Trim40-203ENSMUST00000172711 Csrnp1P59054 583 aa10.29□□□□□ -0.76
Trim40-203ENSMUST00000172711 Eif4g2Q62448 906 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms